Home  |  Contact
Entry: PS00703

General information about the entry

Entry name [info] OKR_DC_1
Accession [info] PS00703
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE;
12-OCT-2022 INFO UPDATE.
PROSITE Doc. [info] PDOC00585

Name and characterization of the entry

Description [info] Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site.
Pattern [info] 
[STAV]-x-S-x-H-K-x(2)-[GSTAN](2)-x-[STA]-Q-[STA](2).

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2022_04 which contains 568'363 sequence entries.


Total number of hits 16 in 16 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.12 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 16 sequences 

ADIA_ECOLI  (P28629    ), DCLY_HAFAL  (P05033    ), DCOR_ECOLI  (P21169    ), 

DCOR_HAEIN  (P44317    ), DCOR_LACS3  (P43099    ), DCOS_ECOLI  (P24169    ), 
LDCA_PSEAE  (Q9I2S7    ), LDCC_ECOLI  (P52095    ), LDCI_ECO57  (P0A9H4    ), 
LDCI_ECOLI  (P0A9H3    ), LDCI_SALTI  (P0A1Z1    ), LDCI_SALTY  (P0A1Z0    ), 
SPEA_BACAN  (Q81MS2    ), SPEA_BACCR  (Q819L4    ), SPEA_BACSU  (P21885    ), 
SPEA_HALH5  (Q9K9K5    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

YAAO_BACSU  (P37536    )


				
	

	

		PDB
[Detailed view]		
		
			13 PDB
			


			1C4K; 1ORD; 2VYC; 3N75; 3Q16; 4UPB; 4UPF; 5FKX; 5FKZ; 5FL2; 6Q6I; 6YN5; 
			
				6YN6
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission