PROSITE entry PS00707

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General information about the entry

Entry name [info]	GLYCOSYL_HYDROL_F31_2
Accession [info]	PS00707
Entry type [info]	PATTERN
Date [info]	01-DEC-1992 CREATED; 01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00120

Name and characterization of the entry

Description [info]	Glycosyl hydrolases family 31 signature 2.
Pattern [info]	G-[AVP]-[DT]-[LIVMTAS]-[CG]-G-[FY]-x(3)-[STP]-x(3)-L-[CL]-x-R-W-x(2)- [LVMI]-[GSA]-[SA]-[FY]-x-P-[FY]-x-R-[DNA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	32 in 29 different sequences
Number of true positive hits	32 in 29 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	24
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	57.14 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	2
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

29 sequences

AGL2_BACTQ  (Q9F234), AGLU_ASPNG  (P56526), AGLU_ASPOR  (Q12558),

AGLU_BETVU  (O04931), AGLU_CANTS  (P29064), AGLU_HORVU  (Q43763), 
AGLU_MUCJA  (Q92442), AGLU_ORYSJ  (Q653V7), AGLU_SCHPO  (Q9C0Y4), 
AGLU_SPIOL  (O04893), AGLU_TETPY  (O00906), AMYG_CANAL  (O74254), 
AMYG_SCHOC  (P22861), GANAB_HUMAN (Q14697), GANAB_MACFA (Q4R4N7), 
GANAB_MOUSE (Q8BHN3), GANAB_PIG   (P79403), LYAG_BOVIN  (Q9MYM4), 
LYAG_HUMAN  (P10253), LYAG_MOUSE  (P70699), LYAG_PONAB  (Q5R7A9), 
LYAG_RAT(Q6P7A9), MGA_HUMAN   (O43451), SUIS_HUMAN  (P14410), 
SUIS_RABIT  (P07768), SUIS_RAT(P23739), SUIS_SUNMU  (O62653), 
YAJ1_SCHPO  (Q09901), YFZB_SCHPO  (Q9URX4)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

24 sequences

AGDC_ASPCL  (A1CNK4), AGDC_ASPFC  (B0XNL6), AGDC_ASPFN  (B8MZ41),

AGDC_ASPFU  (Q4WRH9), AGDC_ASPOR  (Q2UQV7), AGDC_ASPTN  (Q0CMA7), 
AGDC_EMENI  (Q5AWI5), AGDC_NEOFI  (A1D1E6), AGLU_SACS2  (P0CD66), 
AGLU_SACS9  (D0KQM8), GANAB_DICDI (Q94502), GH31A_BACO1 (A7LXT0), 
GLU2A_SCHPO (Q9US55), GLU2A_YEAST (P38138), MGAL_HUMAN  (Q2M2H8), 
MYORG_HUMAN (Q6NSJ0), MYORG_MOUSE (Q69ZQ1), OL4AG_CELJU (B3PEE6), 
SP15_TETCF  (P19965), SQASE_AGRFC (A9CEZ0), SQASE_ECOLI (P32138), 
XYLS_ECOLI  (P31434), XYLS_SACS2  (Q9P999), YCR2_PSEVU  (Q01336)

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PDB
[Detailed view]

39 PDB

2QLY; 2QMJ; 3CTT; 3L4T; 3L4U; 3L4V; 3L4W; 3L4X; 3L4Y; 3L4Z; 3LPO; 3LPP; 5F0E; 5H9O; 5HJO; 5HJR; 5IED; 5IEE; 5IEF; 5IEG; 5KZW; 5KZX; 5NN3; 5NN4; 5NN5; 5NN6; 5NN8; 7JTY; 7KAD; 7KB6; 7KB8; 7KBJ; 7KBR; 7KRY; 7L9E; 7P2Z; 7P32; 8D43; 8EMR
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