Home  |  Contact
Entry: PS00711

General information about the entry

Entry name [info] LIPOXYGENASE_1
Accession [info] PS00711
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00077

Name and characterization of the entry

Description [info] Lipoxygenases iron-binding region signature 1.
Pattern [info] 
[HQ]-[EQ]-x(3)-H-x-[LMA]-[NEQHRCS]-[GSTA]-H-[LIVMSTAC](2)-x-E.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 70 in 70 different sequences
Number of true positive hits 70 in 70 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.22 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron at position 4
Site [info] iron at position 9
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 70 sequences 

ALOX8_MOUSE (O35936    ), AOSL_PLEHO  (O16025    ), LOX11_SOLTU (P37831    ), 

LOX12_HUMAN (P18054    ), LOX12_MOUSE (P39655    ), LOX12_RAT   (F1LQ70    ), 
LOX12_SOLTU (O24379    ), LOX13_SOLTU (Q43189    ), LOX14_SOLTU (Q43190    ), 
LOX15_BOVIN (P27479    ), LOX15_HUMAN (P16050    ), LOX15_MOUSE (P39654    ), 
LOX15_PIG   (P16469    ), LOX15_PONAB (Q5RBE8    ), LOX15_RABIT (P12530    ), 
LOX15_RAT   (Q02759    ), LOX15_SOLTU (Q43191    ), LOX16_SOLTU (Q41238    ), 
LOX17_SOLTU (O22507    ), LOX18_SOLTU (O22508    ), LOX1_ARATH  (Q06327    ), 
LOX1_HORVU  (P29114    ), LOX1_LENCU  (P38414    ), LOX1_ORYSJ  (Q76I22    ), 
LOX1_SOYBN  (P08170    ), LOX1_TANCI  (R9WTS6    ), LOX21_HORVU (P93184    ), 
LOX21_SOLTU (O24370    ), LOX22_HORVU (Q8GSM3    ), LOX23_HORVU (Q8GSM2    ), 
LOX2_ARATH  (P38418    ), LOX2_ORYSJ  (P29250    ), LOX2_PEA    (P14856    ), 
LOX2_SOYBN  (P09439    ), LOX2_TANCI  (R9WS04    ), LOX31_SOLTU (O24371    ), 
LOX3_ARATH  (Q9LNR3    ), LOX3_ORYSJ  (Q7G794    ), LOX3_PEA    (P09918    ), 
LOX3_SOYBN  (P09186    ), LOX4_ARATH  (Q9FNX8    ), LOX4_ORYSJ  (Q53RB0    ), 
LOX4_SOYBN  (P38417    ), LOX5_ARATH  (Q9LUW0    ), LOX5_HUMAN  (P09917    ), 
LOX5_MESAU  (P51399    ), LOX5_MOUSE  (P48999    ), LOX5_ORYSJ  (Q7XV13    ), 
LOX5_RAT    (P12527    ), LOX6_ARATH  (Q9CAG3    ), LOX6_ORYSJ  (Q8H016    ), 
LOXA_PHAVU  (P27480    ), LOXA_PSEAE  (Q9I4G8    ), LOXA_SOLLC  (P38415    ), 
LOXB_PHAVU  (P27481    ), LOXB_SOLLC  (P38416    ), LOXC1_ORYSJ (P38419    ), 
LOXC2_ORYSJ (Q84YK8    ), LOXE3_HUMAN (Q9BYJ1    ), LOXE3_MOUSE (Q9WV07    ), 
LOXE3_RAT   (D3ZKX9    ), LOXX_SOYBN  (P24095    ), LOX_PSEAI   (Q8RNT4    ), 
LX12B_HUMAN (O75342    ), LX12B_MOUSE (O70582    ), LX12B_RAT   (Q2KMM4    ), 
LX12E_MOUSE (P55249    ), LX12E_RAT   (D3ZQF9    ), LX15B_HUMAN (O15296    ), 
LX15B_RAT   (Q8K4F2    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

LILIP_NOSS1 (Q8YK97    ), MNLOX_ASPFU (Q4WA38    )


				
	

	

		PDB
[Detailed view]		
		
			54 PDB
			


			1F8N; 1FGM; 1FGQ; 1FGR; 1FGT; 1HU9; 1IK3; 1JNQ; 1LNH; 1LOX; 1N8Q; 1NO3; 
			
				1ROV; 1RRH; 1RRL; 1Y4K; 1YGE; 2FNQ; 2IUK; 2P0M; 2SBL; 3BNB; 3BNC; 3BND; 
				3BNE; 3D3L; 3DY5; 3FG1; 3FG3; 3FG4; 3O8Y; 3PZW; 3RDE; 3V92; 3V98; 3V99; 
				4G32; 4G33; 4NRE; 4QWT; 4RPE; 4WFO; 4WHA; 5EEO; 5IR4; 5IR5; 5LC8; 5T5V; 
				5TQN; 5TQO; 5TQP; 5TR0; 6N2W; 6NCF
			
			

			» more

				
	





View entry in original PROSITE format


View entry in raw text format (no links)


Direct ScanProsite submission