PROSITE entry PS00712

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General information about the entry

Entry name [info]	RIBOSOMAL_S17E
Accession [info]	PS00712
Entry type [info]	PATTERN
Date [info]	01-DEC-1992 CREATED; 01-APR-2006 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00590

Name and characterization of the entry

Description [info]	Ribosomal protein S17e signature.
Pattern [info]	[IVDYPKS]-x-[ST]-K-x-[LIVMTF]-[RIKM]-N-x-[IV]-[SA]-G-[FY]-x-[TV]-[HKRA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	81 in 81 different sequences
Number of true positive hits	81 in 81 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	5
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	94.19 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

81 sequences

RS171_ARATH (P49205), RS172_ARATH (Q9SJ36), RS173_ARATH (Q9SQZ1),

RS174_ARATH (Q9LZ17), RS17A_SCHPO (O42984), RS17A_YEAST (P02407), 
RS17B_CANAL (A0A1D8PEY9), RS17B_SCHPO (Q9P7J6), RS17B_YEAST (P14127), 
RS17E_AERPE (Q9YA67), RS17E_ARCFU (O29351), RS17E_HALMA (Q5V5R5), 
RS17E_HALS3 (B0R5L3), RS17E_HALSA (Q9HPX1), RS17E_HALWD (Q18FY6), 
RS17E_IGNH4 (A8A954), RS17E_META3 (A6UVG8), RS17E_METAC (Q8THP2), 
RS17E_METAR (Q0W674), RS17E_METBF (Q46DC5), RS17E_METHJ (Q2FNR1), 
RS17E_METJA (P54026), RS17E_METKA (Q8TUZ3), RS17E_METLZ (A2SST9), 
RS17E_METM5 (A4FYQ2), RS17E_METM6 (A9A655), RS17E_METM7 (A6VJN0), 
RS17E_METMA (Q8PXL8), RS17E_METMP (Q6LZP7), RS17E_METPE (B8GKG8), 
RS17E_METS3 (A5ULG0), RS17E_METS5 (A4YIZ6), RS17E_METST (Q2NHW6), 
RS17E_METTH (O26894), RS17E_METVS (A6US72), RS17E_NANEQ (Q74MA1), 
RS17E_NATPD (Q3IS04), RS17E_PICTO (Q6L0U7), RS17E_PYRAB (Q9V0G0), 
RS17E_PYRAE (Q8ZYF4), RS17E_PYRAR (A4WH03), RS17E_PYRCJ (A3MS42), 
RS17E_PYRFU (Q8U0U1), RS17E_PYRHO (P58503), RS17E_PYRIL (A1RTI5), 
RS17E_PYRNV (B1YA34), RS17E_SACS2 (Q980K7), RS17E_SULAC (Q4JAX5), 
RS17E_SULIA (C3MZH2), RS17E_SULIK (C4KIQ2), RS17E_SULIL (C3MRD7), 
RS17E_SULIM (C3MY33), RS17E_SULIN (C3NFY0), RS17E_SULIY (C3N7J4), 
RS17E_SULTO (Q975V4), RS17E_THEAC (Q9HKK8), RS17E_THEGJ (C5A545), 
RS17E_THEKO (Q5JDC7), RS17E_THEON (B6YXA5), RS17E_THESM (C6A4W3), 
RS17E_THEVO (Q97B13), RS17_ANOGA  (Q9U9L1), RS17_BOVIN  (A5PK63), 
RS17_CAEEL  (O01692), RS17_CANLF  (P63273), RS17_CHICK  (P08636), 
RS17_COTJA  (Q7ZUB2), RS17_CRIGR  (P63274), RS17_DICDI  (P42520), 
RS17_DROME  (P17704), RS17_FELCA  (P63275), RS17_HUMAN  (P08708), 
RS17_ICTPU  (Q90YQ6), RS17_MOUSE  (P63276), RS17_NEUCR  (P27770), 
RS17_PIG(Q6QAP7), RS17_RAT(P04644), RS17_SOLLC  (P49215), 
RS17_SPOFR  (Q962R2), RS17_THEAN  (Q967G1), RS17_THEPA  (Q4MYY1)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

5 sequences

RS17E_HALLT (B9LSG7), RS17E_KORCO (B1L657), RS17E_METBU (Q12ZG3),

RS17E_METMJ (A3CVI8), RS17E_STAMF (A3DMZ6)

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PDB
[Detailed view]

219 PDB

1RQ6; 3J6X; 3J6Y; 3J77; 3J78; 3J7P; 3J7R; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6W; 4V6X; 4V7R; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5JB3; 5JBH; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5VYC; 6EML; 6FAI; 6FEC; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWE; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6WDR; 6WOO; 6XA1; 6XIQ; 6XIR; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBD; 6YBS; 6YBW; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOK; 6ZOL; 6ZON; 6ZP4; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 6ZXH; 7A09; 7A1G; 7B7D; 7CPU; 7CPV; 7K5I; 7LS1; 7LS2; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 7N8B; 7NRC; 7NRD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QGG; 7QIX; 7QIY; 7QIZ; 7QP6; 7QP7; 7QVP; 7R4X; 7R81; 7TQL; 7WTT; 7WTU; 7WTV; 7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZPQ; 7ZRS; 7ZUW; 7ZUX; 7ZW0; 8BQD; 8BQX; 8C01; 8CAH; 8CAS; 8CBJ; 8G5Y; 8G5Z; 8G60; 8G61; 8G6J; 8GLP
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