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PROSITE entry PS00717


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS00717
Entry name [info] SIGMA54_1
Accession [info] PS00717
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-JUL-1999 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00593

Name and characterization of the entry

Description [info] Sigma-54 factors family signature 1.
Pattern [info] 
P-[LIVM]-x-[LIVM]-x(2)-[LIVM]-A-x(2)-[LIVMFT]-x(2)-[HS]-x-S-T-[LIVM]-S-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_02 which contains 573'230 sequence entries.


Total number of hits 30 in 30 different sequences
Number of true positive hits 30 in 30 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 30 sequences 

RP54_ACIFI  (P24695), RP54_ACIGI  (P33983), RP54_AZOC5  (P33984), 

RP54_AZOVI  (P08623), RP54_BACSU  (P24219), RP54_BRADU  (P30332), 
RP54_CAUVC  (Q03408), RP54_CERSP  (Q01194), RP54_CLOK5  (P38944), 
RP54_CUPNH  (P28615), RP54_ECOLI  (P24255), RP54_HELPJ  (Q9ZLC8), 
RP54_HELPY  (P56143), RP54_KLEOX  (P06223), RP54_PSEAB  (A0A0H2ZGR9), 
RP54_PSEAE  (P49988), RP54_PSEPK  (P0A171), RP54_PSEPU  (P0A172), 
RP54_RHIET  (P49989), RP54_RHIME  (P17263), RP54_RHIML  (P33985), 
RP54_RHOCA  (P0CY59), RP54_RHOCB  (D5ANH9), RP54_SALTY  (P26979), 
RP54_SHEVD  (Q9S0L2), RP54_SINFN  (P22881), RP54_TREPA  (O83149), 
RP54_VIBAN  (O08429), RP54_XANEU  (P77998), RP55_BRADU  (P30333)
» more

PDB
[Detailed view]		 14 PDB

5NSR; 5NSS; 6GFW; 6GH5; 6GH6; 8F1I; 8F1J; 8F1K; 8RE4; 8REA; 8REB; 8REC; 8RED; 8REE
» more