PROSITE entry PS00717
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General information about the entry
| Entry name [info] | SIGMA54_1 |
| Accession [info] | PS00717 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-JUL-1999 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00593 |
Name and characterization of the entry
| Description [info] | Sigma-54 factors family signature 1. |
| Pattern [info] |
P-[LIVM]-x-[LIVM]-x(2)-[LIVM]-A-x(2)-[LIVMFT]-x(2)-[HS]-x-S-T-[LIVM]-S-R. |
Numerical results [info]
| Total number of hits | 30 in 30 different sequences |
| Number of true positive hits | 30 in 30 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 0 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 100.00 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
30 sequences
RP54_ACIFI (P24695), RP54_ACIGI (P33983), RP54_AZOC5 (P33984), RP54_AZOVI (P08623), RP54_BACSU (P24219), RP54_BRADU (P30332), RP54_CAUVC (Q03408), RP54_CERSP (Q01194), RP54_CLOK5 (P38944), RP54_CUPNH (P28615), RP54_ECOLI (P24255), RP54_HELPJ (Q9ZLC8), RP54_HELPY (P56143), RP54_KLEOX (P06223), RP54_PSEAB (A0A0H2ZGR9), RP54_PSEAE (P49988), RP54_PSEPK (P0A171), RP54_PSEPU (P0A172), RP54_RHIET (P49989), RP54_RHIME (P17263), RP54_RHIML (P33985), RP54_RHOCA (P0CY59), RP54_RHOCB (D5ANH9), RP54_SALTY (P26979), RP54_SHEVD (Q9S0L2), RP54_SINFN (P22881), RP54_TREPA (O83149), RP54_VIBAN (O08429), RP54_XANEU (P77998), RP55_BRADU (P30333)» more
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| PDB [Detailed view] |
8 PDB
5NSR; 5NSS; 6GFW; 6GH5; 6GH6; 8F1I; 8F1J; 8F1K |