PROSITE entry PS00723
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PURL: https://purl.expasy.org/prosite/signature/PS00723
Direct ScanProsite submission
General information about the entry
| Entry name [info] | POLYPRENYL_SYNTHASE_1 |
| Accession [info] | PS00723 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00407 |
Name and characterization of the entry
| Description [info] | Polyprenyl synthases signature 1. |
| Pattern [info] |
[LIVM](2)-x-D-D-x(2,4)-D-x(4)-R-R-[GH]. |
Numerical results [info]
| Total number of hits | 181 in 181 different sequences |
| Number of true positive hits | 181 in 181 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 21 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 89.60 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
181 sequences
ABVS_ASPBC (A0A1L9UKS1), AMBP2_FISAU (V5TF61), ASTC_TALWO (A0A3Q9FFM1), ATMG_ASPFL (Q672V6), AUAS_ASPUT (P9WEP0), BTCA_COLOR (N4V6D4), BTCA_NEOBT (A0A2Z6FZ31), CGCS_COLGL (A0A8H4CUY8), CGDS_COLGL (P9WEV7), CHRDS_ARTSI (Q7XYS8), CHRYS_TANCI (P0C565), CLE6_ASPVE (A0A3S5XFG0), COQ1_NEUCR (Q7S565), COQ1_YARLI (Q6CBH3), COQ1_YEAST (P18900), CRTE_CERS4 (P54976), CRTE_CYAPA (P48368), CRTE_PANAN (P21684), CRTE_PICP2 (B1XJV9), CRTE_PSEVU (P22873), CRTE_RHOCB (P17060), DPASD_APISA (P9WEX3), DPCHD_COLHI (H1VQB1), DPFGD_GIBZE (I1RL14), DPMAD_METAN (P9WEX9), DPMPD_MACPH (P9WEW8), DPS1_HUMAN (Q5T2R2), DPS1_MOUSE (Q33DR2), DPS1_SCHPO (O43091), ERG20_ASPFU (Q4WEB8), ERG20_CANAL (A0A1D8PH78), ERG20_GANLU (B4YA15), ERG20_GIBZE (V6RG22), ERG20_SCHPO (O14230), ERG20_YEAST (P08524), ERIE_HERER (A0A1V0QSA8), EVAS_EMEVA (A0A169T193), EVVS_EMEVA (A0A0P0ZD79), FC1_PHOAM (A2PZA5), FOFS_FUSOX (P9WER6), FPPS1_ARATH (Q09152), FPPS1_ARTSI (Q7XYS9), FPPS1_CANSA (A0A7J6HWR9), FPPS1_LUPAL (P49351), FPPS1_PARAR (O24241), FPPS2_ARATH (Q43315), FPPS2_ARTSI (Q7XYT0), FPPS2_CANSA (A0A1V0QSH7), FPPS2_LUPAL (P49352), FPPS2_PARAR (O24242), FPPS_ARTAN (P49350), FPPS_BOVIN (Q8WMY2), FPPS_CHICK (P08836), FPPS_FUSFU (Q92235), FPPS_HELAN (O64905), FPPS_HUMAN (P14324), FPPS_KLULA (P49349), FPPS_MAIZE (P49353), FPPS_MOUSE (Q920E5), FPPS_MURHI (A0A343W970), FPPS_MYCBO (P0A5H9), FPPS_MYCTO (P9WKH0), FPPS_MYCTU (P9WKH1), FPPS_NEUCR (Q92250), FPPS_NEZVI (A0A386JVA3), FPPS_RAT(P05369), FPS_DICDI (Q9NH03), FPS_PANGI (Q4JHN6), FUP1_FUSPR (A0A1L7VFX3), GA5_GIBF5 (S0E627), GFDPS_LEUCN (A0A0U3BRC5), GFPPS_MYCTU (O53507), GFPS_AERPX (Q9UWR6), GFPS_NATPD (Q3IPL1), GGDPS_MELLI (A0A858E6N7), GGDPS_MELLP (A0A858E7G0), GGPP1_ARATH (P34802), GGPP2_ARATH (O04046), GGPP3_ARATH (Q9LUD9), GGPP4_ARATH (Q9SLG2), GGPP6_ARATH (O22043), GGPP7_ARATH (Q9ZU77), GGPP8_ARATH (Q9LRR0), GGPP9_ARATH (Q9LUE1), GGPPA_ARATH (Q9LJY2), GGPPB_ARATH (Q9LIA0), GGPPC_ARATH (Q9LHR4), GGPPS_BOVIN (P56966), GGPPS_CAPAN (P80042), GGPPS_CATRO (Q42698), GGPPS_DICDI (Q54BK1), GGPPS_EREGS (Q758K0), GGPPS_FUSFU (Q92236), GGPPS_GEOAI (A0A0A7GEY4), GGPPS_HEVBR (Q94ID7), GGPPS_HUMAN (O95749), GGPPS_MOUSE (Q9WTN0), GGPPS_MUCCL (Q9P885), GGPPS_MYCTU (O50410), GGPPS_NEUCR (P24322), GGPPS_RAT (Q6F596), GGPPS_SCHPO (O59703), GGPPS_SINAL (Q43133), GGPPS_YEAST (Q12051), GGPP_METMA (Q8PW34), GGPS_SACS2 (P95999), GGPS_SULAC (P39464), GGR_ARATH (Q39108), GGS1_HYPPI (A0A2I6PJ05), GGS2_ZYMTI (F9WWF1), GGS3_ZYMTI (F9XLC1), GGS4_PHOAM (B2DBE9), GGS_NEOBT (Q6F5E6), GSS1_ZYMTI (F9WZD2), HEPS2_BACSU (P31114), HEPS2_GEOSE (P55785), HEXB_MICLU (O66129), IDSA_METJA (Q58270), IDSA_METTH (O26156), IDSA_METTM (Q53479), IDTG_CLAPA (J7FIX8), ISPA_AQUAE (O66952), ISPA_BACSU (P54383), ISPA_BRADU (Q45220), ISPA_BUCAI (P57537), ISPA_BUCAP (Q8K9A0), ISPA_ECOLI (P22939), ISPA_GEOSE (Q08291), ISPA_HAEIN (P45204), ISPA_MICLU (O66126), ISPA_SINFN (P55539), ISPB_ECOLI (P0AD57), ISPB_HAEIN (P44916), ISPB_SHIFL (P0AD58), JANG_PENJA (A0A0E3D8M9), LTMG_EPIFF (Q56RZ3), LTMG_EPIFI (Q56RZ7), MPMS_MACPH (K2SUY0), NFSS_NEOFI (A1DN30), OBLA_ASPCI (A0A0U5G0B1), OBLA_ASPCL (A1C8C3), OBLA_COCH5 (M2V8C1), OLCC_PENCN (P9WEQ2), PAPS_PHOAM (P9WEV6), PAXG_PENPX (Q9C446), PBCB_EMENI (A0A1U8QLG8), PBSS_PENBI (A0A2Z6AQX7), PCCS_PENCH (A0A348DU52), PCHDS_PENRW (B6HFX8), PENG_PENCR (A0A0E3D8P4), PLE4_CLIPA (A0A2L0VXR5), PLE4_RHOPP (A0A6S6QJ62), PRDS_PENRF (W6QAE7), PREA_CYACA (Q9TLS1), PREA_CYAPA (P31171), PREA_PORPU (P51268), PREA_PYRYE (Q1XDL8), PTMG_PENOH (A0A140JWS2), PVCPS_TALVE (A0A348FUE1), PVPS_TALVE (A0A2Z6AQX6), QNN1_EMEVA (A0A1Y1C7Q5), SDNC_SORAA (A0A1B4XBK0), SDSA_RHOCA (O24743), SPS1_ARATH (Q8S948), SPS1_ORYSJ (Q653T6), SPS2_ARATH (Q76FS5), SPS2_ORYSJ (Q75HZ9), SPS3_ARATH (Q5HZ00), SPS3_ORYSJ (Q0INZ4), SPYE_ASPFU (Q4WBI4), STLSS_EMEVA (A0A0P0ZEM1), STTA_ASPTE (P9WEV2), STTA_ASPTN (Q0CRW6), SUBD_METRA (E9F5E9), TNDC_ASPFV (A0A8K1AY78), TPCA_COCH5 (M2U578), TPS_MATON (A0A7D0AGU9), VRCA_ASPA1 (A0A1L9WQI2), VRTD_PENAE (D7PHZ5), Y8742_DICDI (Q55EU7), Y8823_DICDI (Q54XP1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
21 sequences
BSC8_ALTBR (C9K2Q3), COMQ_BACIU (P0DV08), COMQ_BACNB (D4G0R4), COMQ_BACSC (P0DV09), COMQ_BACSU (P33690), DLP1_HUMAN (Q86YH6), DLP1_MOUSE (Q33DR3), DLP1_RAT(Q5U2R1), DLP1_SCHPO (O13851), DPS1_DICDI (Q54VJ9), GGS1_PHOAM (B2DBE8), GPPS_IPSPI (Q58GE8), GPPS_MYCTU (O05572), HEXPP_SACS2 (Q97W92), NPPPS_MYCTU (O06428), PREA_SYNY3 (P72580), TPRT_ASFB7 (Q65164), TPRT_ASFK5 (P0C9E2), TPRT_ASFM2 (Q8V9T7), TPRT_ASFP4 (P0C9E0), TPRT_ASFWA (P0C9E1)» more |
| PDB [Detailed view] |
156 PDB
pdb_00001fps; pdb_00001rqi; pdb_00001rqj; pdb_00001ubv; pdb_00001ubw; pdb_00001ubx; pdb_00001uby; pdb_00001yq7; pdb_00001yv5; pdb_00001zw5; pdb_00002dh4; pdb_00002e8t; pdb_00002e8u; pdb_00002e8v; pdb_00002e8w; pdb_00002e8x; pdb_00002e90; pdb_00002e91; pdb_00002e92; pdb_00002e93; pdb_00002e94; pdb_00002e95; pdb_00002f7m; pdb_00002f89; pdb_00002f8c; pdb_00002f8z; pdb_00002f92; pdb_00002f94; pdb_00002f9k; pdb_00002j1p; pdb_00002opm; pdb_00002opn; pdb_00002q80; pdb_00002qis; pdb_00002rah; pdb_00002vf6; pdb_00002z4v; pdb_00002z4w; pdb_00002z4x; pdb_00002z4y; pdb_00002z4z; pdb_00002z50; pdb_00002z52; pdb_00002z78; pdb_00002z7h; pdb_00002z7i; pdb_00002zeu; pdb_00002zev; pdb_00003apz; pdb_00003aq0; pdb_00003aqb; pdb_00003aqc; pdb_00003b7l; pdb_00003cp6; pdb_00003n1v; pdb_00003n1w; pdb_00003n3l; pdb_00003n45; pdb_00003n46; pdb_00003n49; pdb_00003n5h; pdb_00003n5j; pdb_00003n6k; pdb_00003rye; pdb_00003s4j; pdb_00004dem; pdb_00004ga3; pdb_00004h5c; pdb_00004h5d; pdb_00004h5e; pdb_00004jvj; pdb_00004kfa; pdb_00004kk2; pdb_00004kpd; pdb_00004kpj; pdb_00004kq5; pdb_00004kqs; pdb_00004kqu; pdb_00004l2x; pdb_00004lfv; pdb_00004lpg; pdb_00004lph; pdb_00004n1z; pdb_00004n9u; pdb_00004nfi; pdb_00004nfj; pdb_00004nfk; pdb_00004ng6; pdb_00004nke; pdb_00004nkf; pdb_00004nua; pdb_00004ogu; pdb_00004p0v; pdb_00004p0w; pdb_00004p0x; pdb_00004pvx; pdb_00004pvy; pdb_00004q23; pdb_00004qpf; pdb_00004qxs; pdb_00004rxa; pdb_00004xqr; pdb_00004xqs; pdb_00004xqt; pdb_00005ayp; pdb_00005cg5; pdb_00005cg6; pdb_00005dgm; pdb_00005dgn; pdb_00005dgs; pdb_00005diq; pdb_00005djp; pdb_00005djr; pdb_00005djv; pdb_00005e8h; pdb_00005e8k; pdb_00005e8l; pdb_00005ern; pdb_00005ero; pdb_00005ja0; pdb_00005jfq; pdb_00005juz; pdb_00005jv0; pdb_00005jv1; pdb_00005jv2; pdb_00005ksx; pdb_00005ygi; pdb_00005ze6; pdb_00005zlf; pdb_00006c56; pdb_00006c57; pdb_00006g31; pdb_00006g32; pdb_00006n7y; pdb_00006n7z; pdb_00006n82; pdb_00006n83; pdb_00006oag; pdb_00006oah; pdb_00006r4v; pdb_00006sxl; pdb_00006sxn; pdb_00006v0k; pdb_00007jth; pdb_00007s09; pdb_00007s0a; pdb_00007s0h; pdb_00007s0l; pdb_00007s0m; pdb_00007wij; pdb_00008eax; pdb_00008f8f; pdb_00008f8k; pdb_00008f8l; pdb_00009b3t; pdb_00009csl » more |