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Entry: PS00725 |
Entry name [info] | GERMIN |
Accession [info] | PS00725 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00597 |
Description [info] | Germin family signature. |
Pattern [info] |
G-x(4)-H-x-H-P-x-[AGS]-x-E-[LIVM]. |
Total number of hits | 79 in 79 different sequences |
Number of true positive hits | 78 in 78 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 12 |
Number of 'partial' sequences | 11 |
Precision (true positives / (true positives + false positives)) | 98.73 % |
Recall (true positives / (true positives + false negatives)) | 86.67 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | manganese at position 3 |
Site [info] | manganese at position 5 |
Site [info] | manganese at position 10 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
78 sequences
AB19A_PRUPE (Q9ZRA4 ), AB19B_PRUPE (O04012 ), ABP20_PRUPE (O04011 ), GER2_WHEAT (P15290 ), GER3_WHEAT (P26759 ), GL110_ARATH (Q9FMA9 ), GL111_ARATH (Q9FMA8 ), GL111_ORYSJ (Q2R352 ), GL112_ARATH (Q9FMA6 ), GL113_ARATH (P92997 ), GL114_ARATH (Q9FID0 ), GL115_ARATH (Q9FIC9 ), GL116_ARATH (Q9FIC8 ), GL117_ARATH (Q9FIC6 ), GL118_ARATH (P92999 ), GL119_ARATH (Q9FL89 ), GL11_ARATH (P92998 ), GL11_ORYSJ (Q7F731 ), GL120_ARATH (P92996 ), GL121_ORYSJ (Q2QXJ4 ), GL122_ORYSJ (Q2QXJ2 ), GL123_ORYSJ (Q2QXJ1 ), GL124_ORYSJ (Q2QXJ0 ), GL12_ORYSJ (Q94JF3 ), GL13_ARATH (Q9M8X3 ), GL13_ORYSJ (Q942A8 ), GL14_ORYSJ (Q942A7 ), GL15_ARATH (Q9M8X5 ), GL16_ARATH (Q9M8X6 ), GL17_ARATH (Q9SFF9 ), GL18_ARATH (Q9LEA7 ), GL19_ARATH (Q9FMB0 ), GL21_ARATH (P94014 ), GL21_ORYSJ (Q6K5Q0 ), GL22_ARATH (Q9FZ27 ), GL22_ORYSJ (Q6K5P9 ), GL23_ORYSJ (Q6K5P8 ), GL24_ARATH (Q9M263 ), GL25_ARATH (O65252 ), GL31_ARATH (P94040 ), GL32_ORYSJ (Q7XZY1 ), GL33_ARATH (P94072 ), GL33_ORYSJ (Q851J8 ), GL34_ARATH (Q9FLT3 ), GL34_ORYSJ (Q851J9 ), GL35_ORYSJ (Q851K0 ), GL36_ORYSJ (Q851K1 ), GL37_ORYSJ (Q10BU2 ), GL38_ORYSJ (Q75HJ4 ), GL41_ORYSJ (Q7XSN6 ), GL52_ORYSJ (Q6I544 ), GL810_ORYSJ (Q6YZ97 ), GL811_ORYSJ (Q6YZY5 ), GL812_ORYSJ (Q6ZCR3 ), GL813_ORYSJ (Q6Z964 ), GL814_ORYSJ (Q6ZBZ2 ), GL81_ORYSJ (Q6YZB2 ), GL82_ORYSJ (Q6YZA9 ), GL83_ORYSJ (Q6YZZ7 ), GL84_ORYSJ (Q6YZZ6 ), GL85_ORYSJ (Q6YZA6 ), GL86_ORYSJ (Q6YZA4 ), GL87_ORYSJ (Q6YZZ2 ), GL88_ORYSJ (Q6YZA1 ), GL89_ORYSJ (Q6YZ99 ), GLP1_BRANA (P46271 ), GLP1_IPONI (P45853 ), GLP1_MESCR (P45852 ), GLP1_MORAL (L8BRS3 ), GLP1_SINAL (P45854 ), GLT1_ARATH (P92995 ), NEC1_NICLS (Q94EG3 ), NEC1_NICPL (Q9SPV5 ), OXO1_HORVU (P45850 ), OXO2_HORVU (P45851 ), RHRE_PEA (Q9S8P4 ), SR1A_PHYPO (P09350 ), SR1B_PHYPO (P09351 )» more
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UniProtKB/Swiss-Prot False negative sequences |
12 sequences
GL12_ARATH (Q9M8X1 ), GL14_ARATH (Q9M8X4 ), GL23_ARATH (P93000 ), GL24_ORYSJ (Q6ESF0 ), GL31_ORYSJ (Q8H021 ), GL32_ARATH (Q9SR72 ), GL51_ORYSJ (Q688L5 ), GL91_ORYSJ (Q652Q1 ), GL92_ORYSJ (Q652Q0 ), GL93_ORYSJ (Q652P9 ), GLT2_ARATH (Q9LMC9 ), GLT3_ARATH (Q9S772 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
11 sequences
ABP_POPEU (P84979 ), GER1_HORVU (P28525 ), GER2_HORVU (P28526 ), GERP_WHEAT (P29532 ), GLP1_BETPN (P85336 ), GLP1_CITSI (P84159 ), GLP1_POPEU (P84978 ), GLP2_BETPN (P85352 ), GLP3_BETPN (P85353 ), GLP4_BETPN (P85354 ), PRVN_THEPV (C0HJY2 )» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
YDBB_BACSU (P96597 ) |
PDB [Detailed view] |
4 PDB
1FI2; 2ET1; 2ET7; 2ETE |