![]() |
|
Entry: PS00728 |
Entry name [info] | AP_NUCLEASE_F1_3 |
Accession [info] | PS00728 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00598 |
Description [info] | AP endonucleases family 1 signature 3. |
Pattern [info] |
N-x-G-x-R-[LIVM]-D-[LIVMFYH]-x-[LV]-x-S. |
Total number of hits | 20 in 20 different sequences |
Number of true positive hits | 20 in 20 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 7 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 74.07 % |
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
20 sequences
APEA_DICDI (P51173 ), APEX1_BOVIN (P23196 ), APEX1_DANRE (A0MTA1 ), APEX1_GORGO (A1YES6 ), APEX1_HUMAN (P27695 ), APEX1_MOUSE (P28352 ), APEX1_PANPA (A1YFZ3 ), APEX1_PANTR (A2T6Y4 ), APEX1_PONPY (A2T7I6 ), APEX1_RAT (P43138 ), APN2_YEAST (P38207 ), ARP_ARATH (P45951 ), EX3_ECOLI (P09030 ), EX3_HAEIN (P44318 ), EX3_SALTI (P0A1B0 ), EX3_SALTY (P0A1A9 ), EXOA_BACSU (P37454 ), EXOA_STRPN (P0A2X3 ), EXOA_STRR6 (P0A2X4 ), RRP1_DROME (P27864 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
7 sequences
APE1L_ARATH (Q5XF07 ), APE2_ARATH (F4JNY0 ), APEX2_BOVIN (Q5E9N9 ), APEX2_HUMAN (Q9UBZ4 ), APEX2_MOUSE (Q68G58 ), APN2_SCHPO (P87175 ), UREND_METTH (O26314 )» more |
PDB [Detailed view] |
51 PDB
1AKO; 1BIX; 1DE8; 1DE9; 1DEW; 1E9N; 1HD7; 2ISI; 2O3C; 2O3H; 3U8U; 4IEM; 4LND; 4QH9; 4QHD; 4QHE; 5CFE; 5CFG; 5DFF; 5DFH; 5DFI; 5DFJ; 5DG0; 5WN0; 5WN1; 5WN2; 5WN3; 5WN4; 5WN5; 6BOQ; 6BOR; 6BOS; 6BOT; 6BOU; 6BOV; 6BOW; 6MK3; 6MKK; 6MKM; 6MKO; 6P93; 6P94; 6W0Q; 6W2P; 6W3L; 6W3N; 6W3Q; 6W3U; 6W43; 6W4I; 6W4T » more |