PROSITE entry PS00731
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | AP_NUCLEASE_F2_3 |
Accession [info] | PS00731 |
Entry type [info] | PATTERN |
Date [info] |
01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00599 |
Name and characterization of the entry
Description [info] | AP endonucleases family 2 signature 3. |
Pattern [info] |
[LIVMFW]-H-x-N-[DEG]-[SA]-x(4)-[GNAQ]-x(3)-D-x-H. |
Numerical results [info]
Total number of hits | 260 in 260 different sequences |
Number of true positive hits | 260 in 260 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 18 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 93.53 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Site [info] | zinc at position 2 |
Site [info] | zinc at position 10 |
Site [info] | zinc at position 12 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
260 sequences
APE_ASFB7 (Q65202 ), APE_ASFK5 (P0C9C8 ), APE_ASFM2 (Q65246 ), APE_ASFP4 (P0C9C6 ), APE_ASFWA (P0C9C7 ), APN1_CAEEL (Q10002 ), APN1_PLABA (A0A509ASK2), APN1_PLAF7 (Q8IE02 ), APN1_SCHPO (P50525 ), APN1_YEAST (P22936 ), END4_ACHLI (A9NFH1 ), END4_ACTP2 (A3MZ76 ), END4_ACTP7 (B3H0M0 ), END4_ACTPJ (B0BTA9 ), END4_AERHH (A0KK26 ), END4_AERS4 (A4SMZ0 ), END4_ALIB4 (A8EWW1 ), END4_ALKOO (A8ML82 ), END4_ANOFW (B7GH81 ), END4_AQUAE (O67551 ), END4_AYWBP (Q2NJF9 ), END4_BACAA (C3P8J1 ), END4_BACAC (C3LKW3 ), END4_BACAH (A0RIQ8 ), END4_BACAN (Q81LV1 ), END4_BACC0 (B7JN09 ), END4_BACC2 (B7IYD6 ), END4_BACC3 (C1ES07 ), END4_BACC4 (B7HCQ9 ), END4_BACC7 (B7HPI4 ), END4_BACCN (A7GSY1 ), END4_BACCQ (B9IY53 ), END4_BACCR (Q818H3 ), END4_BACCZ (Q634Q3 ), END4_BACFN (Q5LG28 ), END4_BACFR (Q64WY5 ), END4_BACHK (Q6HDN3 ), END4_BACLD (Q65HA0 ), END4_BACMK (A9VHR4 ), END4_BACSU (P54476 ), END4_BACTN (Q89YT0 ), END4_BACVZ (A7Z6S8 ), END4_BIFLD (B3DS13 ), END4_BIFLO (Q8G689 ), END4_BUCA5 (B8D8T8 ), END4_BUCAI (P57237 ), END4_BUCAP (P59058 ), END4_BUCAT (B8D742 ), END4_BUCBP (P59496 ), END4_CAMC1 (A8Z6D9 ), END4_CAMFF (A0RRG4 ), END4_CARHZ (Q3ABA7 ), END4_CENSY (A0RYW7 ), END4_CHLAA (A9WII8 ), END4_CHLAB (Q5L798 ), END4_CHLAD (B8G418 ), END4_CHLCH (Q3AT74 ), END4_CHLCV (Q824X6 ), END4_CHLL2 (B3EEJ7 ), END4_CHLL3 (Q3B5R5 ), END4_CHLMU (Q9PJB8 ), END4_CHLP8 (B3QQA9 ), END4_CHLPM (A4SDE2 ), END4_CHLPN (Q9Z7H3 ), END4_CHLSY (B9LAM9 ), END4_CHLT2 (B0B8K0 ), END4_CHLTA (Q3KL70 ), END4_CHLTB (B0BA79 ), END4_CHLTE (Q8KFL0 ), END4_CHLTR (O84630 ), END4_CITBB (B5EAS8 ), END4_CITK8 (A8AE66 ), END4_CLOB8 (A6LQV9 ), END4_CLOD6 (Q189A4 ), END4_CROS8 (A7MLL2 ), END4_DESAH (C0QMG1 ), END4_DESOH (A8ZSE7 ), END4_DESVH (Q72CQ9 ), END4_DESVV (A1VEI5 ), END4_DICDI (Q966U0 ), END4_ECO24 (A7ZNY3 ), END4_ECO27 (B7UFH5 ), END4_ECO45 (B7MF74 ), END4_ECO55 (B7LAI2 ), END4_ECO57 (P0A6C2 ), END4_ECO5E (B5YWV0 ), END4_ECO7I (B7NMX3 ), END4_ECO81 (B7MX24 ), END4_ECO8A (B7M507 ), END4_ECOBW (C4ZU09 ), END4_ECODH (B1X857 ), END4_ECOHS (A8A222 ), END4_ECOK1 (A1AD18 ), END4_ECOL5 (Q0TFT1 ), END4_ECOL6 (Q8FFU0 ), END4_ECOLC (B1IYB0 ), END4_ECOLI (P0A6C1 ), END4_ECOLU (B7N5C2 ), END4_ECOSE (B6I8L0 ), END4_ECOSM (B1LKQ6 ), END4_ECOUT (Q1R9R2 ), END4_EDWI9 (C5BCN2 ), END4_ENT38 (A4WCJ5 ), END4_ENTFA (Q834D0 ), END4_ERWT9 (B2VIH1 ), END4_ESCF3 (B7LVB9 ), END4_EXIS2 (B1YL88 ), END4_FINM2 (B0S196 ), END4_GEODF (B9M4N1 ), END4_GEOKA (Q5KX27 ), END4_GEOSL (Q74FS7 ), END4_GEOSM (C6DYE3 ), END4_GEOSW (C5D4R0 ), END4_GEOTN (A4IR02 ), END4_GLAP5 (B8F7D1 ), END4_HAEDU (Q7VMC4 ), END4_HALH5 (Q9KD33 ), END4_HALHL (A1WXM0 ), END4_HALMA (Q5V0S8 ), END4_HALOH (B8CW79 ), END4_HALS3 (B0R2U6 ), END4_HALSA (Q9HSK7 ), END4_HALWD (Q18KA6 ), END4_HELMI (B0TD39 ), END4_HERA2 (A9B5N7 ), END4_KLEP3 (B5XP51 ), END4_KLEP7 (A6TBP4 ), END4_LACP7 (A9KNS9 ), END4_LACPL (Q88VR2 ), END4_LATSS (Q38XB2 ), END4_LISIN (Q92BR0 ), END4_LISMC (C1KV96 ), END4_LISMF (Q71ZM1 ), END4_LISMO (Q8Y756 ), END4_LISW6 (A0AIQ1 ), END4_LYSSC (B1HTF6 ), END4_MAGMM (A0L901 ), END4_MALP2 (Q8EWT2 ), END4_MESH2 (Q601Y6 ), END4_MESH7 (Q4A8V0 ), END4_MESHJ (Q4AAX4 ), END4_META1 (B3PMH1 ), END4_METPE (B8GKX5 ), END4_METST (Q2NFM3 ), END4_MOOTA (Q2RJF1 ), END4_MYCAP (A5IYT8 ), END4_MYCBO (P63536 ), END4_MYCBP (A1KGF0 ), END4_MYCBT (C1AL03 ), END4_MYCGA (Q7NBA9 ), END4_MYCGE (P47477 ), END4_MYCLB (B8ZSC5 ), END4_MYCLE (P30770 ), END4_MYCMM (B2HSJ8 ), END4_MYCPN (P75457 ), END4_MYCPU (Q98PU8 ), END4_MYCTA (A5U056 ), END4_MYCTO (P9WQ12 ), END4_MYCTU (P9WQ13 ), END4_MYCUA (A0PM27 ), END4_NATPD (Q3IMK8 ), END4_NAUPA (B9L9K0 ), END4_NITMS (A9A555 ), END4_NITSB (A6Q1P1 ), END4_OCEIH (Q8EPZ2 ), END4_OLEA2 (Q30YP7 ), END4_ONYPE (Q6YQC1 ), END4_PARD8 (A6LB99 ), END4_PARUW (Q6MED0 ), END4_PECAS (Q6D3L8 ), END4_PECCP (C6DEL1 ), END4_PEDPA (Q03F56 ), END4_PELPB (B4SE58 ), END4_PERMH (C0QRI1 ), END4_PETMO (A9BJ15 ), END4_PHOLL (Q7N364 ), END4_PHOPR (Q6LUP5 ), END4_PHOV8 (A6L330 ), END4_PROA2 (B4S3I3 ), END4_PROMH (B4ETA5 ), END4_SALA4 (B5EYQ5 ), END4_SALAR (A9MK49 ), END4_SALCH (Q57MD6 ), END4_SALDC (B5FNK8 ), END4_SALEP (B5R173 ), END4_SALG2 (B5RC42 ), END4_SALHS (B4TAM6 ), END4_SALNS (B4SY37 ), END4_SALPA (Q5PE50 ), END4_SALPB (A9N6I5 ), END4_SALPC (C0Q0T7 ), END4_SALPK (B5BE34 ), END4_SALSV (B4TNR0 ), END4_SALTI (Q8Z593 ), END4_SALTY (Q8ZNK6 ), END4_SERP5 (A8GGT5 ), END4_SHIB3 (B2TVT4 ), END4_SHIBS (Q31YW6 ), END4_SHIDS (Q32EQ7 ), END4_SHIF8 (Q0T2W5 ), END4_SHIFL (Q83QW6 ), END4_SHISS (Q3Z047 ), END4_SOLUE (Q01TU5 ), END4_STAA1 (A7X2V2 ), END4_STAA2 (A6U229 ), END4_STAA3 (Q2FGG6 ), END4_STAA8 (Q2FY16 ), END4_STAA9 (A5IT85 ), END4_STAAB (Q2YT22 ), END4_STAAC (Q5HFK3 ), END4_STAAE (A6QHA0 ), END4_STAAM (P63537 ), END4_STAAN (P63538 ), END4_STAAR (Q6GGE2 ), END4_STAAS (Q6G909 ), END4_STAAT (A8Z497 ), END4_STAAW (P63539 ), END4_STACT (B9DNM8 ), END4_STAEQ (Q5HNZ1 ), END4_STAES (Q8CP25 ), END4_STAHJ (Q4L6Q7 ), END4_STAS1 (Q49Y00 ), END4_STRAW (Q82AG6 ), END4_STRCO (Q9S2N2 ), END4_SULDN (Q30PH2 ), END4_SULNB (A6QCI0 ), END4_SULSY (B2V7A4 ), END4_SYMTH (Q67S99 ), END4_THEAB (B7IDS7 ), END4_THEAC (Q9HJS3 ), END4_THEM4 (A6LMU8 ), END4_THEMA (Q9WYJ7 ), END4_THENE (O86954 ), END4_THENN (B9KBS2 ), END4_THEP1 (A5IK54 ), END4_THESQ (B1L9C6 ), END4_THET2 (Q72KH8 ), END4_THEVO (Q97A09 ), END4_TOLAT (C4LD49 ), END4_TRIL1 (B3E325 ), END4_UREPA (Q9PQI5 ), END4_UREU1 (B5ZBB4 ), END4_VIBC1 (A7MS84 ), END4_VIBC3 (A5F5R6 ), END4_VIBCH (Q9KPK7 ), END4_VIBCM (C3LQD2 ), END4_VIBPA (Q87SC6 ), END4_VIBVU (Q8DEP6 ), END4_VIBVY (Q7MNR1 ), END4_WOLSU (Q7M8B4 ), END4_YERE8 (A1JLX8 ), END4_YERP3 (A7FK62 ), END4_YERPA (Q1C982 ), END4_YERPB (B2K9J1 ), END4_YERPE (Q8ZGJ1 ), END4_YERPG (A9R4S1 ), END4_YERPN (Q1CG79 ), END4_YERPP (A4TNA4 ), END4_YERPS (Q66CR5 ), END4_YERPY (B1JRM5 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
18 sequences
END4_AKKM8 (B2UQE3 ), END4_ALKCK (Q5WHC2 ), END4_BIFLS (B7GRN1 ), END4_CAMC5 (A7GW36 ), END4_CAMHC (A7I010 ), END4_CHLPB (B3ELV8 ), END4_CLOBA (B2V158 ), END4_CLOBB (B2TL64 ), END4_DESPS (Q6ASE4 ), END4_MESFL (Q6F1D3 ), END4_MESM1 (Q6KH96 ), END4_METLZ (A2SPZ6 ), END4_METMJ (A3CT71 ), END4_MIMIV (Q5UPY4 ), END4_MYCCT (Q2ST57 ), END4_MYCMS (Q6MUC7 ), END4_MYCS5 (Q4A6S5 ), END4_NATTJ (B2A499 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
END4_YEREN (P42691 ) |
PDB [Detailed view] |
14 PDB
1QTW; 1QUM; 1XP3; 2NQ9; 2NQH; 2NQJ; 2X7V; 2X7W; 3AAL; 4HNO; 4K1G; 5ZHZ; 6KHY; 6KI3 » more |