PROSITE entry PS00742
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General information about the entry
| Entry name [info] | PEP_ENZYMES_2 |
| Accession [info] | PS00742 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00527 |
Name and characterization of the entry
| Description [info] | PEP-utilizing enzymes signature 2. |
| Pattern [info] |
[DEQSKN]-x-[LIVMF]-[SA]-[LIVMF]-G-[ST]-N-D-[LIVM]-x-Q-[LIVMFYGT]- [STALIV]-[LIVMFY]-[GAS]-x(2)-R. |
Numerical results [info]
| Total number of hits | 86 in 86 different sequences |
| Number of true positive hits | 86 in 86 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 13 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 86.87 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
86 sequences
PPDK1_ARATH (O23404), PPDK1_MAIZE (P11155), PPDK1_ORYSJ (Q6AVA8), PPDK2_MAIZE (Q42368), PPDK2_ORYSJ (Q75KR1), PPDK_CLOSY (P22983), PPDK_ENTH1 (P37213), PPDK_FLABI (Q39735), PPDK_FLABR (Q39734), PPDK_FLAPR (Q42736), PPDK_FLATR (P22221), PPDK_GIAIN (P51776), PPDK_MESCR (Q42910), PPDK_RHIME (Q59754), PPDK_RICBR (Q1RH78), PPDK_RICCN (Q92HI8), PPDK_RICFE (Q4ULI7), PPDK_RICPR (Q9ZD55), PPDK_RICTY (Q68WP2), PPDK_TREPA (O83728), PPSA_AERPE (Q9YEC5), PPSA_AQUAE (O67899), PPSA_ARCFU (O29548), PPSA_DEIRA (O83026), PPSA_ECOLI (P23538), PPSA_HELPJ (Q9ZMV4), PPSA_HELPY (P56070), PPSA_METJA (Q57962), PPSA_NEIMB (Q9K0I2), PPSA_PSEAB (Q02KR1), PPSA_PYRAB (Q9V2H7), PPSA_PYRFU (P42850), PPSA_PYRHO (O57830), PPSA_STAMF (P46893), PPSA_SYNY3 (Q55905), PT1P_ECOLI (P37177), PT1P_SALTY (P37178), PT1_BACSI (O83018), PT1_BACSU (P08838), PT1_BORBU (O51508), PT1_BUCAI (Q9WXI6), PT1_BUCAP (Q8KA50), PT1_BUCBP (Q89B04), PT1_CHLMU (Q9PK57), PT1_CHLPN (Q9Z9E3), PT1_CHLTR (O84340), PT1_CUPNH (P23536), PT1_ECOLI (P08839), PT1_ENTFA (P23530), PT1_GEOSE (P42014), PT1_HAEIN (P43922), PT1_HALH5 (Q9K8D3), PT1_HALVD (D4GYE2), PT1_LACLA (Q9CJ82), PT1_LACLC (Q9ZAD8), PT1_LATSK (O07126), PT1_LISIN (Q92D19), PT1_LISMO (O31149), PT1_LYSSH (Q84F83), PT1_MYCCT (P45617), PT1_MYCGE (P47668), PT1_MYCPN (P75168), PT1_PRIMG (O69251), PT1_SALTI (P0A250), PT1_SALTY (P0A249), PT1_STAAC (Q5HH01), PT1_STAAM (Q931U2), PT1_STAAN (Q99V14), PT1_STAAR (Q6GI01), PT1_STAAS (Q6GAD0), PT1_STAAU (P51183), PT1_STAAW (Q8NX83), PT1_STACT (P23533), PT1_STAEQ (Q5HQ85), PT1_STAES (Q8CT19), PT1_STRCO (Q9KZP1), PT1_STREI (Q9WXK9), PT1_STRMU (P45595), PT1_STRSL (P30299), PTFAX_RHOCA (P23388), PTFAX_XANCP (P45597), PTFX1_ECOLI (P77439), PTFX2_ECOLI (P32670), PTFX_ECO57 (Q8XBQ8), PTFX_ECOL6 (Q8FFD8), PTFX_SHIFL (Q83QP3)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
13 sequences
DHAM_ECOLI (P37349), DHAM_KLEM8 (A0A0H3H456), DHAM_PANAM (D4GL26), DHAM_PROSM (P0DN88), GWD1_ARATH (Q9SAC6), GWD1_CITRE (Q8LPT9), GWD1_SOLTU (Q9AWA5), GWD2_ARATH (Q9STV0), PPSA_METTH (O27190), PPS_BACSU (O34309), PWD_ARATH (Q6ZY51), PWD_ORYSJ (Q2QTC2), YVKC_BACSU (O34796)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
PPSA_ENTAG (O54457) |
| PDB [Detailed view] |
24 PDB
1DIK; 1GGO; 1JDE; 1KBL; 1KC7; 1VBG; 1VBH; 2DIK; 2HRO; 2HWG; 2KX9; 2L5H; 2N5T; 2OLS; 2R82; 2WQD; 2XDF; 5JVJ; 5JVL; 5JVN; 5LU4; 6V9K; 6VU0; 8A8E » more |