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PROSITE entry PS00742


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General information about the entry

Entry name [info] PEP_ENZYMES_2
Accession [info] PS00742
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00527

Name and characterization of the entry

Description [info] PEP-utilizing enzymes signature 2.
Pattern [info]
[DEQSKN]-x-[LIVMF]-[SA]-[LIVMF]-G-[ST]-N-D-[LIVM]-x-Q-[LIVMFYGT]-
[STALIV]-[LIVMFY]-[GAS]-x(2)-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 86 in 86 different sequences
Number of true positive hits 86 in 86 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 12
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 87.76 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
86 sequences

PPDK1_ARATH (O23404), PPDK1_MAIZE (P11155), PPDK1_ORYSJ (Q6AVA8), 
PPDK2_MAIZE (Q42368), PPDK2_ORYSJ (Q75KR1), PPDK_CLOSY  (P22983), 
PPDK_ENTH1  (P37213), PPDK_FLABI  (Q39735), PPDK_FLABR  (Q39734), 
PPDK_FLAPR  (Q42736), PPDK_FLATR  (P22221), PPDK_GIAIN  (P51776), 
PPDK_MESCR  (Q42910), PPDK_RHIME  (Q59754), PPDK_RICBR  (Q1RH78), 
PPDK_RICCN  (Q92HI8), PPDK_RICFE  (Q4ULI7), PPDK_RICPR  (Q9ZD55), 
PPDK_RICTY  (Q68WP2), PPDK_TREPA  (O83728), PPSA_AERPE  (Q9YEC5), 
PPSA_AQUAE  (O67899), PPSA_ARCFU  (O29548), PPSA_DEIRA  (O83026), 
PPSA_ECOLI  (P23538), PPSA_HELPJ  (Q9ZMV4), PPSA_HELPY  (P56070), 
PPSA_METJA  (Q57962), PPSA_NEIMB  (Q9K0I2), PPSA_PSEAB  (Q02KR1), 
PPSA_PYRAB  (Q9V2H7), PPSA_PYRFU  (P42850), PPSA_PYRHO  (O57830), 
PPSA_STAMF  (P46893), PPSA_SYNY3  (Q55905), PT1P_ECOLI  (P37177), 
PT1P_SALTY  (P37178), PT1_BACSI   (O83018), PT1_BACSU   (P08838), 
PT1_BORBU   (O51508), PT1_BUCAI   (Q9WXI6), PT1_BUCAP   (Q8KA50), 
PT1_BUCBP   (Q89B04), PT1_CHLMU   (Q9PK57), PT1_CHLPN   (Q9Z9E3), 
PT1_CHLTR   (O84340), PT1_CUPNH   (P23536), PT1_ECOLI   (P08839), 
PT1_ENTFA   (P23530), PT1_GEOSE   (P42014), PT1_HAEIN   (P43922), 
PT1_HALH5   (Q9K8D3), PT1_HALVD   (D4GYE2), PT1_LACLA   (Q9CJ82), 
PT1_LACLC   (Q9ZAD8), PT1_LATSK   (O07126), PT1_LISIN   (Q92D19), 
PT1_LISMO   (O31149), PT1_LYSSH   (Q84F83), PT1_MYCCT   (P45617), 
PT1_MYCGE   (P47668), PT1_MYCPN   (P75168), PT1_PRIMG   (O69251), 
PT1_SALTI   (P0A250), PT1_SALTY   (P0A249), PT1_STAAC   (Q5HH01), 
PT1_STAAM   (Q931U2), PT1_STAAN   (Q99V14), PT1_STAAR   (Q6GI01), 
PT1_STAAS   (Q6GAD0), PT1_STAAU   (P51183), PT1_STAAW   (Q8NX83), 
PT1_STACT   (P23533), PT1_STAEQ   (Q5HQ85), PT1_STAES   (Q8CT19), 
PT1_STRCO   (Q9KZP1), PT1_STREI   (Q9WXK9), PT1_STRMU   (P45595), 
PT1_STRSL   (P30299), PTFAX_RHOCA (P23388), PTFAX_XANCP (P45597), 
PTFX1_ECOLI (P77439), PTFX2_ECOLI (P32670), PTFX_ECO57  (Q8XBQ8), 
PTFX_ECOL6  (Q8FFD8), PTFX_SHIFL  (Q83QP3)
» more

UniProtKB/Swiss-Prot
False negative sequences
12 sequences

DHAM_ECOLI  (P37349), DHAM_KLEM8  (A0A0H3H456), DHAM_PANAM  (D4GL26), 
DHAM_PROSM  (P0DN88), GWD1_ARATH  (Q9SAC6), GWD1_CITRE  (Q8LPT9), 
GWD1_SOLTU  (Q9AWA5), GWD2_ARATH  (Q9STV0), PPSA_METTH  (O27190), 
PWD_ARATH   (Q6ZY51), PWD_ORYSJ   (Q2QTC2), YVKC_BACSU  (O34796)
» more

UniProtKB/Swiss-Prot
'Partial' sequences
1 sequence

PPSA_ENTAG  (O54457)

		
PDB
[Detailed view]
24 PDB

1DIK; 1GGO; 1JDE; 1KBL; 1KC7; 1VBG; 1VBH; 2DIK; 2HRO; 2HWG; 2KX9; 2L5H; 2N5T; 2OLS; 2R82; 2WQD; 2XDF; 5JVJ; 5JVL; 5JVN; 5LU4; 6V9K; 6VU0; 8A8E
» more