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Entry: PS00742

General information about the entry

Entry name [info] PEP_ENZYMES_2
Accession [info] PS00742
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
22-FEB-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00527

Name and characterization of the entry

Description [info] PEP-utilizing enzymes signature 2.
Pattern [info] 
[DEQSKN]-x-[LIVMF]-[SA]-[LIVMF]-G-[ST]-N-D-[LIVM]-x-Q-[LIVMFYGT]-
[STALIV]-[LIVMFY]-[GAS]-x(2)-R.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_01 which contains 569'213 sequence entries.


Total number of hits 85 in 85 different sequences
Number of true positive hits 85 in 85 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 13
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 86.73 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 85 sequences 

PPDK1_ARATH (O23404    ), PPDK1_MAIZE (P11155    ), PPDK1_ORYSJ (Q6AVA8    ), 

PPDK2_ORYSJ (Q75KR1    ), PPDK_CLOSY  (P22983    ), PPDK_ENTH1  (P37213    ), 
PPDK_FLABI  (Q39735    ), PPDK_FLABR  (Q39734    ), PPDK_FLAPR  (Q42736    ), 
PPDK_FLATR  (P22221    ), PPDK_GIAIN  (P51776    ), PPDK_MESCR  (Q42910    ), 
PPDK_RHIME  (Q59754    ), PPDK_RICBR  (Q1RH78    ), PPDK_RICCN  (Q92HI8    ), 
PPDK_RICFE  (Q4ULI7    ), PPDK_RICPR  (Q9ZD55    ), PPDK_RICTY  (Q68WP2    ), 
PPDK_TREPA  (O83728    ), PPSA_AERPE  (Q9YEC5    ), PPSA_AQUAE  (O67899    ), 
PPSA_ARCFU  (O29548    ), PPSA_DEIRA  (O83026    ), PPSA_ECOLI  (P23538    ), 
PPSA_HELPJ  (Q9ZMV4    ), PPSA_HELPY  (P56070    ), PPSA_METJA  (Q57962    ), 
PPSA_NEIMB  (Q9K0I2    ), PPSA_PSEAB  (Q02KR1    ), PPSA_PYRAB  (Q9V2H7    ), 
PPSA_PYRFU  (P42850    ), PPSA_PYRHO  (O57830    ), PPSA_STAMF  (P46893    ), 
PPSA_SYNY3  (Q55905    ), PT1P_ECOLI  (P37177    ), PT1P_SALTY  (P37178    ), 
PT1_BACSI   (O83018    ), PT1_BACSU   (P08838    ), PT1_BORBU   (O51508    ), 
PT1_BUCAI   (Q9WXI6    ), PT1_BUCAP   (Q8KA50    ), PT1_BUCBP   (Q89B04    ), 
PT1_CHLMU   (Q9PK57    ), PT1_CHLPN   (Q9Z9E3    ), PT1_CHLTR   (O84340    ), 
PT1_CUPNH   (P23536    ), PT1_ECOLI   (P08839    ), PT1_ENTFA   (P23530    ), 
PT1_GEOSE   (P42014    ), PT1_HAEIN   (P43922    ), PT1_HALH5   (Q9K8D3    ), 
PT1_HALVD   (D4GYE2    ), PT1_LACLA   (Q9CJ82    ), PT1_LACLC   (Q9ZAD8    ), 
PT1_LATSK   (O07126    ), PT1_LISIN   (Q92D19    ), PT1_LISMO   (O31149    ), 
PT1_LYSSH   (Q84F83    ), PT1_MYCCT   (P45617    ), PT1_MYCGE   (P47668    ), 
PT1_MYCPN   (P75168    ), PT1_PRIMG   (O69251    ), PT1_SALTI   (P0A250    ), 
PT1_SALTY   (P0A249    ), PT1_STAAC   (Q5HH01    ), PT1_STAAM   (Q931U2    ), 
PT1_STAAN   (Q99V14    ), PT1_STAAR   (Q6GI01    ), PT1_STAAS   (Q6GAD0    ), 
PT1_STAAU   (P51183    ), PT1_STAAW   (Q8NX83    ), PT1_STACT   (P23533    ), 
PT1_STAEQ   (Q5HQ85    ), PT1_STAES   (Q8CT19    ), PT1_STRCO   (Q9KZP1    ), 
PT1_STREI   (Q9WXK9    ), PT1_STRMU   (P45595    ), PT1_STRSL   (P30299    ), 
PTFAX_RHOCA (P23388    ), PTFAX_XANCP (P45597    ), PTFX1_ECOLI (P77439    ), 
PTFX2_ECOLI (P32670    ), PTFX_ECO57  (Q8XBQ8    ), PTFX_ECOL6  (Q8FFD8    ), 
PTFX_SHIFL  (Q83QP3    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 13 sequences 

DHAM_ECOLI  (P37349    ), DHAM_KLEOK  (A0A0H3H456), DHAM_PANAM  (D4GL26    ), 

DHAM_PROSM  (P0DN88    ), GWD1_ARATH  (Q9SAC6    ), GWD1_CITRE  (Q8LPT9    ), 
GWD1_SOLTU  (Q9AWA5    ), GWD2_ARATH  (Q9STV0    ), PPSA_METTH  (O27190    ), 
PPS_BACSU   (O34309    ), PWD_ARATH   (Q6ZY51    ), PWD_ORYSJ   (Q2QTC2    ), 
YVKC_BACSU  (O34796    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

PPSA_ENTAG  (O54457    )


				
	

	

		PDB
[Detailed view]		
		
			23 PDB
			


			1DIK; 1GGO; 1JDE; 1KBL; 1KC7; 1VBG; 1VBH; 2DIK; 2HRO; 2HWG; 2KX9; 2L5H; 
			
				2N5T; 2OLS; 2R82; 2WQD; 2XDF; 5JVJ; 5JVL; 5JVN; 5LU4; 6V9K; 6VU0
			
			

			» more

				
	





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