PROSITE entry PS00752

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General information about the entry

Entry name [info]	XPA_1
Accession [info]	PS00752
Entry type [info]	PATTERN
Date [info]	01-DEC-1992 CREATED; 01-DEC-1992 DATA UPDATE; 08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00611

Name and characterization of the entry

Description [info]	XPA protein signature 1.
Pattern [info]	C-x-[DE]-C-x(3)-[LIVMF]-x(1,2)-D-x(2)-L-x(3)-F-x(4)-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.

Total number of hits	6 in 6 different sequences
Number of true positive hits	6 in 6 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	2
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	75.00 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Site [info]	zinc(?) at position 1
Site [info]	zinc(?) at position 4
Site [info]	zinc(?) at position 14
Site [info]	zinc(?) at position 16
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	6 sequences RAD14_YEAST (P28519), XPA_CHICK (P27089), XPA_DROME (P28518), XPA_HUMAN (P23025), XPA_MOUSE (Q64267), XPA_XENLA (P27088) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	2 sequences RAD14_CANAL (P53709), RAD14_SCHPO (O59753)
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence XPA_CRIGR (Q64029)
PDB [Detailed view]	18 PDB 1D4U; 1XPA; 5A39; 5A3D; 5G32; 5G33; 5G34; 5G35; 5LCL; 5LCM; 6J44; 6LAE; 6RO4; 7AD8; 8EBT; 8EBU; 8EBX; 8EBY » more