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PROSITE entry PS00752


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General information about the entry

Entry name [info] XPA_1
Accession [info] PS00752
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-1992 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00611

Name and characterization of the entry

Description [info] XPA protein signature 1.
Pattern [info] 
C-x-[DE]-C-x(3)-[LIVMF]-x(1,2)-D-x(2)-L-x(3)-F-x(4)-C-x(2)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.


Total number of hits 6 in 6 different sequences
Number of true positive hits 6 in 6 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 2
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 75.00 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] zinc(?) at position 1
Site [info] zinc(?) at position 4
Site [info] zinc(?) at position 14
Site [info] zinc(?) at position 16
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 6 sequences 

RAD14_YEAST (P28519), XPA_CHICK   (P27089), XPA_DROME   (P28518), 

XPA_HUMAN   (P23025), XPA_MOUSE   (Q64267), XPA_XENLA   (P27088)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

RAD14_CANAL (P53709), RAD14_SCHPO (O59753)


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			1 sequence
			


			
XPA_CRIGR   (Q64029)


				
	

	

		PDB
[Detailed view]		
		
			18 PDB
			


			1D4U; 1XPA; 5A39; 5A3D; 5G32; 5G33; 5G34; 5G35; 5LCL; 5LCM; 6J44; 6LAE; 
			
				6RO4; 7AD8; 8EBT; 8EBU; 8EBX; 8EBY
			
			

			» more