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Entry: PS00764

General information about the entry

Entry name [info] ENDONUCLEASE_III_1
Accession [info] PS00764
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE;
13-NOV-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00615

Name and characterization of the entry

Description [info] Endonuclease III iron-sulfur binding region signature.
Pattern [info] 
C-x(3)-[KRSN]-P-[KRAGL]-C-x(2)-C-x(5)-C.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_10 which contains 561'356 sequence entries.


Total number of hits 29 in 29 different sequences
Number of true positive hits 29 in 29 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 23
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 55.77 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] iron_sulfur at position 1
Site [info] iron_sulfur at position 6
Site [info] iron_sulfur at position 8
Site [info] iron_sulfur at position 10
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 29 sequences 

END3_BACSU  (P39788    ), END3_ECOL6  (P0AB84    ), END3_ECOLI  (P0AB83    ), 

END3_HAEIN  (P44319    ), END3_MYCBO  (P63541    ), END3_MYCLE  (Q9CB92    ), 
END3_MYCTO  (P9WQ10    ), END3_MYCTU  (P9WQ11    ), END3_RICPR  (O05956    ), 
END3_SYNY3  (P73715    ), END3_THEMA  (Q9WYK0    ), END3_TREPA  (O83754    ), 
GTMR_METTF  (P29588    ), MUTYH_HUMAN (Q9UIF7    ), MUTYH_MOUSE (Q99P21    ), 
MUTYH_RAT   (Q8R5G2    ), MUTY_BUCAI  (P57617    ), MUTY_BUCAP  (Q8K926    ), 
MUTY_BUCBP  (Q89A45    ), MUTY_ECOLI  (P17802    ), MUTY_HAEIN  (P44320    ), 
MUTY_SALTY  (Q05869    ), MYH1_SCHPO  (Q10159    ), NTH1_ARATH  (Q9SIC4    ), 
NTH_BOVIN   (Q2KID2    ), NTH_CAEEL   (P54137    ), NTH_CHICK   (A7M7B9    ), 
NTH_ENCCU   (Q8SRB8    ), UVEN_MICLC  (P46303    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 23 sequences 

DG783_ARATH (F4JCQ3    ), DME_ARATH   (Q8LK56    ), DML2_ARATH  (Q9SR66    ), 

DML3_ARATH  (O49498    ), END3_BUCAI  (P57219    ), END3_BUCAP  (Q8KA16    ), 
END3_BUCBP  (Q89AW4    ), END3_METJA  (Q58030    ), END3_RICCN  (Q92GH4    ), 
END3_RICFE  (Q4UK93    ), END3_RICTY  (Q68W04    ), MUTYH_ARATH (F4JRF4    ), 
MUTY_BACSU  (O31584    ), MUTY_GEOSE  (P83847    ), NTH1_YEAST  (P31378    ), 
NTH2_ARATH  (B9DFZ0    ), NTH2_YEAST  (Q08214    ), NTH_EMENI   (C8VC05    ), 
NTH_HUMAN   (P78549    ), NTH_MOUSE   (O35980    ), NTH_SCHPO   (Q09907    ), 
ROS1_ARATH  (Q9SJQ6    ), Y1434_METJA (Q58829    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

MUTY_AERHY  (P46230    )


				
	

	

		PDB
[Detailed view]		
		
			15 PDB
			


			1KEA; 1KG2; 1KG3; 1KG4; 1KG5; 1KG6; 1KG7; 1MUD; 1MUN; 1MUY; 1WEF; 1WEG; 
			
				1WEI; 2ABK; 3N5N
			
			

			» more

				
	





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