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PROSITE entry PS00768


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General information about the entry

Entry name [info] TRANSTHYRETIN_1
Accession [info] PS00768
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-APR-2002 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00617

Name and characterization of the entry

Description [info] Transthyretin signature 1.
Pattern [info] 
[KH]-[IV]-L-[DN]-x(3)-G-x-P-[AG]-x(2)-[LIVM]-x-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 97.78 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] T4-binding at position 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 44 sequences 

HIUH1_CAEEL (Q21882), HIUH1_RHIME (Q92VB9), HIUH2_CAEEL (O44578), 

HIUH2_RHIME (Q92UG5), HIUH_BACSU  (O32142), HIUH_BRUME  (Q8YFU1), 
HIUH_BRUSU  (Q8G228), HIUH_CAUVC  (Q9A545), HIUH_DANRE  (Q06S87), 
HIUH_DEIRA  (Q9RV69), HIUH_ECO57  (Q8XB75), HIUH_ECOLI  (P76341), 
HIUH_HALH5  (Q9KET9), HIUH_PSEAE  (Q9I3J5), HIUH_RALN1  (Q8XXJ7), 
HIUH_RHILO  (Q98CI7), HIUH_SALDU  (Q4VYA5), HIUH_SALTI  (Q8Z7Q6), 
HIUH_SALTY  (Q8ZQ52), HIUH_SCHPO  (O74492), TTHL_ARATH  (Q9LVM5), 
TTHY_BOVIN  (O46375), TTHY_CHICK  (P27731), TTHY_CROPO  (O55245), 
TTHY_ERIEU  (Q9MYN8), TTHY_HUMAN  (P02766), TTHY_LITCT  (P31779), 
TTHY_MACFA  (Q8HXW1), TTHY_MACGI  (Q29616), TTHY_MONDO  (P49141), 
TTHY_MOUSE  (P07309), TTHY_NOTEU  (P42204), TTHY_PANTR  (Q5U7I5), 
TTHY_PETBR  (P49142), TTHY_PIG(P50390), TTHY_PONAB  (Q5NVS2), 
TTHY_RABIT  (P07489), TTHY_RAT(P02767), TTHY_SHEEP  (P12303), 
TTHY_SMIMA  (P49143), TTHY_SORAR  (O46654), TTHY_TILRU  (P30623), 
TTHY_XENLA  (B7ZS96), TTHY_XENTR  (A4QNN7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

HIUH_MOUSE  (Q9CRB3)


				
	

	

		PDB
[Detailed view]		
		
			329 PDB
			


			1BM7; 1BMZ; 1BZ8; 1BZD; 1BZE; 1DVQ; 1DVS; 1DVT; 1DVU; 1DVX; 1DVY; 1DVZ; 
			
				1E3F; 1E4H; 1E5A; 1ETB; 1F41; 1F86; 1FHN; 1G1O; 1GKE; 1GKO; 1ICT; 1IE4; 
				1III; 1IIK; 1IJN; 1KGI; 1KGJ; 1QAB; 1QWH; 1RLB; 1SOK; 1SOQ; 1TFP; 1THA; 
				1THC; 1TLM; 1TSH; 1TT6; 1TTA; 1TTB; 1TTR; 1TYR; 1TZ8; 1U21; 1X7S; 1X7T; 
				1Y1D; 1Z7J; 1ZCR; 1ZD6; 2B14; 2B15; 2B16; 2B77; 2B9A; 2F7I; 2F8I; 2FBR; 
				2FLM; 2G2N; 2G2P; 2G3X; 2G3Z; 2G4E; 2G4G; 2G5U; 2G9K; 2GAB; 2GPZ; 2H0E; 
				2H0F; 2H0J; 2H1X; 2H4E; 2H6U; 2IGL; 2NBO; 2NBP; 2NOY; 2PAB; 2QEL; 2QGB; 
				2QGC; 2QGD; 2QGE; 2QPF; 2ROX; 2ROY; 2TRH; 2TRY; 2WQA; 3A4D; 3A4E; 3A4F; 
				3B56; 3BSZ; 3BT0; 3CBR; 3CFM; 3CFN; 3CFQ; 3CFT; 3CN0; 3CN1; 3CN2; 3CN3; 
				3CN4; 3CXF; 3D2T; 3D7P; 3DGD; 3DID; 3DJR; 3DJS; 3DJZ; 3DK0; 3DK2; 3DO4; 
				3ESN; 3ESO; 3ESP; 3FC8; 3FCB; 3GLZ; 3GPS; 3GRB; 3GRG; 3GS0; 3GS4; 3GS7; 
				3HJ0; 3I9P; 3IMR; 3IMS; 3IMT; 3IMU; 3IMV; 3IMW; 3IPB; 3IPE; 3IWU; 3IWV; 
				3KGU; 3M1O; 3NEE; 3NEO; 3P3R; 3P3S; 3P3T; 3P3U; 3Q1E; 3SSG; 3TCT; 3U2I; 
				3U2J; 3W3B; 4ABQ; 4ABU; 4ABV; 4ABW; 4AC2; 4AC4; 4ACT; 4ANK; 4D7B; 4DER; 
				4DES; 4DET; 4DEU; 4DEW; 4FI6; 4FI7; 4FI8; 4HIQ; 4HIS; 4HJS; 4HJT; 4HJU; 
				4I85; 4I87; 4I89; 4IIZ; 4IK6; 4IK7; 4IKI; 4IKJ; 4IKK; 4IKL; 4KY2; 4L1S; 
				4L1T; 4MAS; 4MRB; 4MRC; 4N85; 4N86; 4PM1; 4PME; 4PMF; 4PVL; 4PVM; 4PVN; 
				4QXV; 4TKW; 4TL5; 4TLK; 4TLS; 4TLT; 4TLU; 4TM9; 4TNE; 4TNG; 4TQ8; 4TQH; 
				4TQI; 4TQP; 4WNJ; 4WNS; 4WO0; 5A6I; 5AKS; 5AKT; 5AKV; 5AL0; 5AL8; 5AYT; 
				5BOJ; 5CLX; 5CLY; 5CLZ; 5CM1; 5CN3; 5CNH; 5CR1; 5DEJ; 5DWP; 5E23; 5E4A; 
				5E4O; 5EN3; 5EZP; 5FO2; 5FW6; 5FW7; 5FW8; 5H0V; 5H0W; 5H0X; 5H0Y; 5H0Z; 
				5HJG; 5IHH; 5JID; 5JIM; 5JIQ; 5K1J; 5K1N; 5L4F; 5L4I; 5L4J; 5L4M; 5LLL; 
				5LLV; 5N5Q; 5N62; 5N7C; 5NFE; 5NFW; 5OQ0; 5TTR; 5TZL; 5U48; 5U49; 5U4A; 
				5U4B; 5U4C; 5U4D; 5U4E; 5U4F; 5U4G; 6D0W; 6E6Z; 6E70; 6E74; 6E75; 6E76; 
				6E77; 6E78; 6EOY; 6EP1; 6FFT; 6FWD; 6FXU; 6FZL; 6GR7; 6GRP; 6KGB; 6R66; 
				6R67; 6R68; 6SUG; 6SUH; 6TI9; 6TJN; 6U0Q; 6XTK; 7ACU; 7DT3; 7DT5; 7EJQ; 
				7ERH; 7Q3I; 7Q9L; 7Q9N; 7Q9O; 7QC5; 7RLK; 7THA; 7WL6; 7Y6J; 7YBR; 7YCQ; 
				7Z60; 8ADE; 8AWI; 8AWW; 8HY4
			
			

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