PROSITE entry PS00770
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General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS00770 |
| Entry name [info] | AA_TRANSFER_CLASS_4 |
| Accession [info] | PS00770 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00618 |
Name and characterization of the entry
| Description [info] | Aminotransferases class-IV signature. |
| Pattern [info] |
E-x-[STAGCI]-x(2)-N-[LIVMFAC]-[FY]-x(6,12)-[LIVMFA]-x-T-x(6,8)-[LIVM]-x- [GS]-[LIVM]-x-[KR]. |
Numerical results [info]
| Total number of hits | 78 in 78 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 11 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 98.72 % |
| Recall (true positives / (true positives + false negatives)) | 87.50 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
ATNH_EMENI (Q5AV02), BCA1_SCHPO (O14370), BCA1_YEAST (P38891), BCA2_YEAST (P47176), BCAT1_ARATH (Q93Y32), BCAT1_HUMAN (P54687), BCAT1_HUMLU (K7QKH1), BCAT1_MOUSE (P24288), BCAT1_RAT (P54690), BCAT1_SHEEP (Q9GKM4), BCAT2_ARATH (Q9M439), BCAT2_BOVIN (Q5EA40), BCAT2_HUMAN (O15382), BCAT2_HUMLU (K7QHS5), BCAT2_MOUSE (O35855), BCAT2_PONAB (Q5REP0), BCAT2_RAT (O35854), BCAT3_ARATH (Q9M401), BCAT5_ARATH (Q9FYA6), BCAT6_ARATH (Q9LPM9), BCAT7_ARATH (Q9LPM8), BCAT_CAEEL (P54688), BCAT_DICDI (Q54N47), BCAT_MONBE (A9UZ24), BCAT_NEMVE (A7SLW1), DAAA_BACLI (P54692), DAAA_BACSU (O07597), DAAA_BACYM (P19938), DAAA_LYSSH (P54693), DAAA_STAAC (Q5HF24), DAAA_STAAM (P63511), DAAA_STAAN (P99090), DAAA_STAAR (Q6GFV1), DAAA_STAAS (Q6G8H7), DAAA_STAAW (Q8NW24), DAAA_STAEQ (Q5HNG0), DAAA_STAES (Q8CS41), DAAA_STAHA (P54694), ILVE1_BACSU (O31461), ILVE2_BACSU (P39576), ILVE_AQUAE (O67733), ILVE_ARCFU (O29329), ILVE_ECO57 (P0AB82), ILVE_ECOL6 (P0AB81), ILVE_ECOLI (P0AB80), ILVE_HAEIN (P54689), ILVE_HELPJ (Q9ZJF1), ILVE_HELPY (O26004), ILVE_METJA (Q58414), ILVE_METTH (O27481), ILVE_MYCLE (O32954), ILVE_MYCS2 (A0R066), ILVE_MYCTO (P9WQ74), ILVE_MYCTU (P9WQ75), ILVE_PSEAE (O86428), ILVE_RICBR (Q1RIJ2), ILVE_RICCN (Q92I26), ILVE_RICFE (Q4ULR3), ILVE_RICPR (O05970), ILVE_RICTY (Q9AKE5), ILVE_SALTI (P0A1A6), ILVE_SALTY (P0A1A5), ILVE_STAAC (Q5HIC1), ILVE_STAAM (P63512), ILVE_STAAN (P99138), ILVE_STAAR (Q6GJB4), ILVE_STAAS (Q6GBT3), ILVE_STAAW (P63513), ILVE_STAEQ (Q5HRJ8), ILVE_STAES (Q8CQ78), ILVE_STRCO (O86505), ILVE_SYNY3 (P54691), ILVE_THEMA (P74921), PABC_BACSU (P28821), PABC_ECOLI (P28305), PABC_VIBCH (Q9KQI0), PABC_VIBHA (Q56693)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
11 sequences
BALDT_MYCTU (Q79FW0), BCAL1_ARATH (Q8W0Z7), BCAL2_ARATH (Q9ASR4), BCAT4_ARATH (Q9LE06), DAAA_ARATH (Q8L493), DAAA_LISIN (Q92B90), DAAA_LISM4 (G2JZ74), DAAA_LISMF (Q71Z49), DAAA_LISMO (P0DJL9), PABC_YEAST (Q03266), TOXF_COCCA (Q9Y885)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
BCAT2_PIG (O19098) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
YJLD_BACSU (P80861) |
| PDB [Detailed view] |
67 PDB
1A3G; 1DAA; 1EKF; 1EKP; 1EKV; 1ET0; 1I1K; 1I1L; 1I1M; 1I2K; 1I2L; 1IYD; 1IYE; 1KT8; 1KTA; 2A1H; 2ABJ; 2COG; 2COI; 2COJ; 2DAA; 2HDK; 2HG8; 2HGW; 2HGX; 2HHF; 3CSW; 3DAA; 3DTF; 3DTG; 3HT5; 3JZ6; 3LQS; 4DAA; 5BWR; 5BWT; 5BWU; 5BWV; 5BWW; 5BWX; 5CR5; 5HNE; 5I5S; 5I5T; 5I5U; 5I5V; 5I5W; 5I5X; 5I5Y; 5I60; 5MPR; 5MQZ; 5MR0; 5U3F; 6NST; 6PRX; 7NTR; 7NWA; 7NWB; 7NWC; 7NWE; 7NWM; 7NXN; 7NXO; 7NY2; 7NY9; 7NYA » more |