PROSITE entry PS00770
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General information about the entry
| Entry name [info] | AA_TRANSFER_CLASS_4 |
| Accession [info] | PS00770 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-DEC-2001 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00618 |
Name and characterization of the entry
| Description [info] | Aminotransferases class-IV signature. |
| Pattern [info] |
E-x-[STAGCI]-x(2)-N-[LIVMFAC]-[FY]-x(6,12)-[LIVMFA]-x-T-x(6,8)-[LIVM]-x- [GS]-[LIVM]-x-[KR]. |
Numerical results [info]
| Total number of hits | 78 in 78 different sequences |
| Number of true positive hits | 77 in 77 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 1 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 98.72 % |
| Recall (true positives / (true positives + false negatives)) | 88.51 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
77 sequences
ATNH_EMENI (Q5AV02 ), BCA1_SCHPO (O14370 ), BCA1_YEAST (P38891 ), BCA2_YEAST (P47176 ), BCAT1_ARATH (Q93Y32 ), BCAT1_HUMAN (P54687 ), BCAT1_HUMLU (K7QKH1 ), BCAT1_MOUSE (P24288 ), BCAT1_RAT (P54690 ), BCAT1_SHEEP (Q9GKM4 ), BCAT2_ARATH (Q9M439 ), BCAT2_BOVIN (Q5EA40 ), BCAT2_HUMAN (O15382 ), BCAT2_HUMLU (K7QHS5 ), BCAT2_MOUSE (O35855 ), BCAT2_PONAB (Q5REP0 ), BCAT2_RAT (O35854 ), BCAT3_ARATH (Q9M401 ), BCAT5_ARATH (Q9FYA6 ), BCAT6_ARATH (Q9LPM9 ), BCAT7_ARATH (Q9LPM8 ), BCAT_CAEEL (P54688 ), BCAT_DICDI (Q54N47 ), BCAT_MONBE (A9UZ24 ), BCAT_NEMVE (A7SLW1 ), DAAA_BACLI (P54692 ), DAAA_BACSU (O07597 ), DAAA_BACYM (P19938 ), DAAA_LYSSH (P54693 ), DAAA_STAAC (Q5HF24 ), DAAA_STAAM (P63511 ), DAAA_STAAN (P99090 ), DAAA_STAAR (Q6GFV1 ), DAAA_STAAS (Q6G8H7 ), DAAA_STAAW (Q8NW24 ), DAAA_STAEQ (Q5HNG0 ), DAAA_STAES (Q8CS41 ), DAAA_STAHA (P54694 ), ILVE1_BACSU (O31461 ), ILVE2_BACSU (P39576 ), ILVE_AQUAE (O67733 ), ILVE_ARCFU (O29329 ), ILVE_ECO57 (P0AB82 ), ILVE_ECOL6 (P0AB81 ), ILVE_ECOLI (P0AB80 ), ILVE_HAEIN (P54689 ), ILVE_HELPJ (Q9ZJF1 ), ILVE_HELPY (O26004 ), ILVE_METJA (Q58414 ), ILVE_METTH (O27481 ), ILVE_MYCLE (O32954 ), ILVE_MYCS2 (A0R066 ), ILVE_MYCTO (P9WQ74 ), ILVE_MYCTU (P9WQ75 ), ILVE_PSEAE (O86428 ), ILVE_RICBR (Q1RIJ2 ), ILVE_RICCN (Q92I26 ), ILVE_RICFE (Q4ULR3 ), ILVE_RICPR (O05970 ), ILVE_RICTY (Q9AKE5 ), ILVE_SALTI (P0A1A6 ), ILVE_SALTY (P0A1A5 ), ILVE_STAAC (Q5HIC1 ), ILVE_STAAM (P63512 ), ILVE_STAAN (P99138 ), ILVE_STAAR (Q6GJB4 ), ILVE_STAAS (Q6GBT3 ), ILVE_STAAW (P63513 ), ILVE_STAEQ (Q5HRJ8 ), ILVE_STAES (Q8CQ78 ), ILVE_STRCO (O86505 ), ILVE_SYNY3 (P54691 ), ILVE_THEMA (P74921 ), PABC_BACSU (P28821 ), PABC_ECOLI (P28305 ), PABC_VIBCH (Q9KQI0 ), PABC_VIBHA (Q56693 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
BCAL1_ARATH (Q8W0Z7 ), BCAL2_ARATH (Q9ASR4 ), BCAT4_ARATH (Q9LE06 ), DAAA_ARATH (Q8L493 ), DAAA_LISIN (Q92B90 ), DAAA_LISM4 (G2JZ74 ), DAAA_LISMF (Q71Z49 ), DAAA_LISMO (P0DJL9 ), PABC_YEAST (Q03266 ), TOXF_COCCA (Q9Y885 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
BCAT2_PIG (O19098 ) |
| UniProtKB/Swiss-Prot False positive sequences |
1 sequence
YJLD_BACSU (P80861 ) |
| PDB [Detailed view] |
67 PDB
1A3G; 1DAA; 1EKF; 1EKP; 1EKV; 1ET0; 1I1K; 1I1L; 1I1M; 1I2K; 1I2L; 1IYD; 1IYE; 1KT8; 1KTA; 2A1H; 2ABJ; 2COG; 2COI; 2COJ; 2DAA; 2HDK; 2HG8; 2HGW; 2HGX; 2HHF; 3CSW; 3DAA; 3DTF; 3DTG; 3HT5; 3JZ6; 3LQS; 4DAA; 5BWR; 5BWT; 5BWU; 5BWV; 5BWW; 5BWX; 5CR5; 5HNE; 5I5S; 5I5T; 5I5U; 5I5V; 5I5W; 5I5X; 5I5Y; 5I60; 5MPR; 5MQZ; 5MR0; 5U3F; 6NST; 6PRX; 7NTR; 7NWA; 7NWB; 7NWC; 7NWE; 7NWM; 7NXN; 7NXO; 7NY2; 7NY9; 7NYA » more |