PROSITE entry PS00773
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General information about the entry
| Entry name [info] | CHITINASE_19_1 |
| Accession [info] | PS00773 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-JUN-1994 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00620 |
Name and characterization of the entry
| Description [info] | Chitinases family 19 signature 1. |
| Pattern [info] |
C-x(4,5)-F-Y-[ST]-x(3)-[FY]-[LIVMF]-x-A-x(3)-[YF]-x(2)-F-[GSA]. |
Numerical results [info]
| Total number of hits | 60 in 60 different sequences |
| Number of true positive hits | 60 in 60 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 21 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 85.71 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
60 sequences
AGI_URTDI (P11218), CHI10_ORYSJ (Q5NB11), CHI12_ORYSJ (P25765), CHI1_GOSHI (Q39799), CHI1_HEVBR (Q949H3), CHI1_HORVU (P11955), CHI1_ORYSJ (Q42993), CHI1_SOLTU (P52403), CHI1_THECC (Q41596), CHI1_TOBAC (P08252), CHI2_BRANA (Q09023), CHI2_GOSHI (Q39785), CHI2_HEVBR (W0IWL0), CHI2_HORVU (P23951), CHI2_ORYSJ (Q7DNA1), CHI2_PEA(P21226), CHI2_SOLTU (P52404), CHI2_TOBAC (P24091), CHI3_ORYSJ (P24626), CHI3_SOLTU (P52405), CHI3_TOBAC (P29059), CHI4_BRANA (Q06209), CHI4_CRYJA (Q5NTA4), CHI4_ORYSJ (O04138), CHI4_PHAVU (P27054), CHI4_SOLTU (P52406), CHI58_ARATH (O24598), CHI59_ARATH (O24658), CHI5_ARATH (Q9M2U5), CHI5_ORYSJ (Q7Y1Z0), CHI5_PHAVU (P36361), CHI6_ORYSJ (Q6K8R2), CHI6_POPTR (P16579), CHI8_ORYSJ (Q7XCK6), CHI8_POPTR (P16061), CHIA_MAIZE (P29022), CHIA_SECCE (Q9FRV1), CHIA_SOLCI (Q40114), CHIA_SOLLC (Q05539), CHIB_ARATH (P19171), CHIB_MAIZE (P29023), CHIB_POPTR (P29031), CHIB_SOLLC (Q05540), CHIB_VITVI (P51613), CHIC_SECCE (Q9FRV0), CHIC_SOLLC (Q05538), CHID_SOLLC (Q05537), CHIL_HEVBR (Q8GUD7), CHIP_TOBAC (P17513), CHIQ_TOBAC (P17514), CHIT_ACTCC (P86473), CHIT_CARPA (P85084), CHIT_DIOJA (P80052), CHIT_PERAE (P93680), CHIT_PETHY (P29021), CHIT_PHAVU (P06215), CHIT_SOLTU (P05315), CHIX_PEA(P36907), CHI_ARATH (O24603), MLX56_MORAL (A7XQ02)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
AMP_LYMAR (P86521), AMP_TRIKH (P85966), CHI11_ORYSJ (Q10S66), CHI60_ARATH (O24654), CHI61_ARATH (O22842), CHI62_ARATH (O22841), CHI7_ORYSJ (Q7Y1Z1), CHI9_ORYSJ (Q688M5), CTL1_ARATH (Q9MA41), CTL2_ARATH (Q9LSP9)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
21 sequences
CHI1_CAPAA (P86078), CHI1_CAPCH (P86081), CHI1_CASSA (P29137), CHI1_GINBI (P85343), CHI1_PEA(P21225), CHI1_TAXBA (P85337), CHI2_ARAHY (Q06014), CHI2_CAPAA (P86079), CHI2_CAPCH (P86082), CHI2_TAXBA (P85338), CHI3_ARAHY (Q06015), CHI3_TAXBA (P85355), CHI4_ARAHY (Q06016), CHIA_ARAHY (Q06012), CHIB_ARAHY (Q06013), CHIB_PEA(P21227), CHIC_POPTR (P29032), CHIT_AVESA (P86181), CHIT_TRISX (C0HJM6), CHLY_CARPA (P81241), IAMY_COILA (P15326)» more |
| PDB [Detailed view] |
11 PDB
1CNS; 2BAA; 2DKV; 3CQL; 3IWR; 4DWX; 4DYG; 4J0L; 4MCK; 4MST; 5H7T |