PROSITE entry PS00773
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | CHITINASE_19_1 |
| Accession [info] | PS00773 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-JUN-1994 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00620 |
Name and characterization of the entry
| Description [info] | Chitinases family 19 signature 1. |
| Pattern [info] |
C-x(4,5)-F-Y-[ST]-x(3)-[FY]-[LIVMF]-x-A-x(3)-[YF]-x(2)-F-[GSA]. |
Numerical results [info]
| Total number of hits | 60 in 60 different sequences |
| Number of true positive hits | 60 in 60 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 10 |
| Number of 'partial' sequences | 21 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 85.71 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
60 sequences
AGI_URTDI (P11218 ), CHI10_ORYSJ (Q5NB11 ), CHI12_ORYSJ (P25765 ), CHI1_GOSHI (Q39799 ), CHI1_HEVBR (Q949H3 ), CHI1_HORVU (P11955 ), CHI1_ORYSJ (Q42993 ), CHI1_SOLTU (P52403 ), CHI1_THECC (Q41596 ), CHI1_TOBAC (P08252 ), CHI2_BRANA (Q09023 ), CHI2_GOSHI (Q39785 ), CHI2_HEVBR (W0IWL0 ), CHI2_HORVU (P23951 ), CHI2_ORYSJ (Q7DNA1 ), CHI2_PEA (P21226 ), CHI2_SOLTU (P52404 ), CHI2_TOBAC (P24091 ), CHI3_ORYSJ (P24626 ), CHI3_SOLTU (P52405 ), CHI3_TOBAC (P29059 ), CHI4_BRANA (Q06209 ), CHI4_CRYJA (Q5NTA4 ), CHI4_ORYSJ (O04138 ), CHI4_PHAVU (P27054 ), CHI4_SOLTU (P52406 ), CHI58_ARATH (O24598 ), CHI59_ARATH (O24658 ), CHI5_ARATH (Q9M2U5 ), CHI5_ORYSJ (Q7Y1Z0 ), CHI5_PHAVU (P36361 ), CHI6_ORYSJ (Q6K8R2 ), CHI6_POPTR (P16579 ), CHI8_ORYSJ (Q7XCK6 ), CHI8_POPTR (P16061 ), CHIA_MAIZE (P29022 ), CHIA_SECCE (Q9FRV1 ), CHIA_SOLCI (Q40114 ), CHIA_SOLLC (Q05539 ), CHIB_ARATH (P19171 ), CHIB_MAIZE (P29023 ), CHIB_POPTR (P29031 ), CHIB_SOLLC (Q05540 ), CHIB_VITVI (P51613 ), CHIC_SECCE (Q9FRV0 ), CHIC_SOLLC (Q05538 ), CHID_SOLLC (Q05537 ), CHIL_HEVBR (Q8GUD7 ), CHIP_TOBAC (P17513 ), CHIQ_TOBAC (P17514 ), CHIT_ACTCC (P86473 ), CHIT_CARPA (P85084 ), CHIT_DIOJA (P80052 ), CHIT_PERAE (P93680 ), CHIT_PETHY (P29021 ), CHIT_PHAVU (P06215 ), CHIT_SOLTU (P05315 ), CHIX_PEA (P36907 ), CHI_ARATH (O24603 ), MLX56_MORAL (A7XQ02 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
10 sequences
AMP_LYMAR (P86521 ), AMP_TRIKH (P85966 ), CHI11_ORYSJ (Q10S66 ), CHI60_ARATH (O24654 ), CHI61_ARATH (O22842 ), CHI62_ARATH (O22841 ), CHI7_ORYSJ (Q7Y1Z1 ), CHI9_ORYSJ (Q688M5 ), CTL1_ARATH (Q9MA41 ), CTL2_ARATH (Q9LSP9 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
21 sequences
CHI1_CAPAA (P86078 ), CHI1_CAPCH (P86081 ), CHI1_CASSA (P29137 ), CHI1_GINBI (P85343 ), CHI1_PEA (P21225 ), CHI1_TAXBA (P85337 ), CHI2_ARAHY (Q06014 ), CHI2_CAPAA (P86079 ), CHI2_CAPCH (P86082 ), CHI2_TAXBA (P85338 ), CHI3_ARAHY (Q06015 ), CHI3_TAXBA (P85355 ), CHI4_ARAHY (Q06016 ), CHIA_ARAHY (Q06012 ), CHIB_ARAHY (Q06013 ), CHIB_PEA (P21227 ), CHIC_POPTR (P29032 ), CHIT_AVESA (P86181 ), CHIT_TRISX (C0HJM6 ), CHLY_CARPA (P81241 ), IAMY_COILA (P15326 )» more |
| PDB [Detailed view] |
11 PDB
1CNS; 2BAA; 2DKV; 3CQL; 3IWR; 4DWX; 4DYG; 4J0L; 4MCK; 4MST; 5H7T |