PROSITE logo

PROSITE entry PS00779


View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] GLYCO_HORMONE_ALPHA_1
Accession [info] PS00779
Entry type [info] PATTERN
Date [info] 01-DEC-1992 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00623

Name and characterization of the entry

Description [info] Glycoprotein hormones alpha chain signature 1.
Pattern [info] 
C-x-G-C-C-[FY]-S-[RQS]-A-[FY]-P-T-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 54 in 54 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 3
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.74 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Site [info] disulfide at position 1
Site [info] disulfide at position 4
Site [info] disulfide at position 5
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 54 sequences 

GLHA1_CYPCA (P01221), GLHA1_ONCKE (P13152), GLHA2_CYPCA (P18857), 

GLHA2_ONCKE (P69063), GLHA2_ONCTS (P69062), GLHA_ACALA  (P30970), 
GLHA_AILFU  (Q8HZS0), GLHA_AILME  (Q8WN20), GLHA_ANGAN  (P27794), 
GLHA_AOTNA  (Q3HRV5), GLHA_BALAC  (P37036), GLHA_BOSMU  (Q19PY8), 
GLHA_BOVIN  (P01217), GLHA_BUBBU  (Q9GL36), GLHA_CALJA  (P51499), 
GLHA_CANLF  (Q9XSW8), GLHA_CAPHI  (Q8WMW8), GLHA_CAVPO  (Q9JK68), 
GLHA_CERNI  (Q8WMR3), GLHA_CLAGA  (P53542), GLHA_COTJA  (P68242), 
GLHA_CTEID  (P30983), GLHA_EQUAS  (Q28365), GLHA_EQUQB  (O46642), 
GLHA_FELCA  (Q52R91), GLHA_FUNHE  (P47744), GLHA_HORSE  (P01220), 
GLHA_HUMAN  (P01215), GLHA_HYPMO  (P37037), GLHA_ICTPU  (Q9YGP3), 
GLHA_LITCT  (P80051), GLHA_MACFA  (Q9BEH3), GLHA_MACMU  (P22762), 
GLHA_MASCO  (Q9ERG4), GLHA_MELGA  (P68241), GLHA_MERUN  (Q9ERJ6), 
GLHA_MESAU  (Q9ERG5), GLHA_MICMO  (Q9ERG3), GLHA_MONDO  (Q6YNX4), 
GLHA_MORSA  (Q91119), GLHA_MOUSE  (P01216), GLHA_MURCI  (P12836), 
GLHA_NIPNI  (Q8JIE9), GLHA_OSPRU  (P68267), GLHA_PANTA  (Q9BDI8), 
GLHA_PHYMC  (P25329), GLHA_PIG(P01219), GLHA_RABIT  (P07474), 
GLHA_RAT(P11962), GLHA_SAIBB  (Q3YC03), GLHA_SHEEP  (P01218), 
GLHA_STRCA  (P80665), GLHA_THUOB  (P37204), GLHA_TRIVU  (P68268)
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

GPHA2_HUMAN (Q96T91), GPHA2_MOUSE (Q925Q5), GPHA2_RAT   (Q925Q4)


				
	

	

		PDB
[Detailed view]		
		
			17 PDB
			


			1DZ7; 1E9J; 1FL7; 1HCN; 1HD4; 1HRP; 1QFW; 1XWD; 4AY9; 4MQW; 7FIG; 7FIH; 
			
				7FII; 7T9I; 7UTZ; 7XW5; 8I2G
			
			

			» more