PROSITE entry PS00803
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General information about the entry
| Entry name [info] | CALRETICULIN_1 |
| Accession [info] | PS00803 |
| Entry type [info] | PATTERN |
| Date [info] |
01-DEC-1992 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00636 |
Name and characterization of the entry
| Description [info] | Calreticulin family signature 1. |
| Pattern [info] |
[KRHN]-x-[DEQN]-[DEQNK]-x(3)-C-G-G-[AG]-[FY]-[LIVM]-[KN]-[LIVMFY](2). |
Numerical results [info]
| Total number of hits | 54 in 54 different sequences |
| Number of true positive hits | 54 in 54 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 3 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 98.18 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
54 sequences
CALR1_ARATH (O04151), CALR2_ARATH (Q38858), CALR3_ARATH (O04153), CALR3_BOVIN (Q2TBR8), CALR3_HUMAN (Q96L12), CALR3_MOUSE (Q9D9Q6), CALR_BERST (Q9ZPP1), CALR_BETVU (O81919), CALR_BOMMO (Q7Z1E6), CALR_BOVIN (P52193), CALR_CAEBR (Q61KR9), CALR_CAEEL (P27798), CALR_CHLAE (Q4VIT5), CALR_CHLRE (Q9STD3), CALR_CRIGR (Q8K3H7), CALR_DROME (P29413), CALR_ENTH1 (P83003), CALR_EUGGR (Q9ZNY3), CALR_HUMAN (P27797), CALR_MACFA (Q4R6K8), CALR_MACFU (Q2HWU3), CALR_MAIZE (Q9SP22), CALR_MOUSE (P14211), CALR_NICPL (Q40401), CALR_ONCVO (P11012), CALR_ORYSJ (Q9SLY8), CALR_PIG(P28491), CALR_PRUAR (Q9XF98), CALR_RABIT (P15253), CALR_RAT(P18418), CALR_RICCO (P93508), CALR_SCHMA (Q06814), CALX1_ARATH (P29402), CALX2_ARATH (Q38798), CALX_ARTBC (D4AVD4), CALX_ASPFU (Q6Q487), CALX_CAEBR (A8XA40), CALX_CAEEL (P34652), CALX_CANLF (P24643), CALX_HELTU (Q39994), CALX_HUMAN (P27824), CALX_MOUSE (P35564), CALX_PEA(O82709), CALX_PONAB (Q5R440), CALX_RAT(P35565), CALX_SCHPO (P36581), CALX_SOYBN (Q39817), CALX_YEAST (P27825), CLGN_BOVIN (Q3SYT6), CLGN_CANLF (E2RA18), CLGN_HUMAN (O14967), CLGN_MOUSE (P52194), CNE1_CRYNH (J9VLH0), CNE1_USTMA (A0A0D1C6P2)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
YOFJ_SCHPO (Q9P7D0) |
| UniProtKB/Swiss-Prot 'Partial' sequences |
3 sequences
CALR_CANLF (P28490), CALR_PELLE (P31832), CALR_SPIOL (P30806) |
| PDB [Detailed view] |
12 PDB
1JHN; 3O0V; 3O0W; 3O0X; 3POS; 3POW; 3RG0; 5HCA; 5HCB; 5LK5; 6ENY; 7QPD |