PROSITE entry PS00804

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General information about the entry

Entry name [info]	CALRETICULIN_2
Accession [info]	PS00804
Entry type [info]	PATTERN
Date [info]	01-DEC-1992 CREATED; 01-DEC-1992 DATA UPDATE; 03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00636

Name and characterization of the entry

Description [info]	Calreticulin family signature 2.
Pattern [info]	[LIVM](2)-F-G-P-D-x-C-[AG].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.

Total number of hits	54 in 54 different sequences
Number of true positive hits	54 in 54 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	2
Number of 'partial' sequences	3

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	96.43 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	54 sequences CALR1_ARATH (O04151 ), CALR2_ARATH (Q38858 ), CALR3_ARATH (O04153 ), CALR3_BOVIN (Q2TBR8 ), CALR3_HUMAN (Q96L12 ), CALR3_MOUSE (Q9D9Q6 ), CALR_BERST (Q9ZPP1 ), CALR_BETVU (O81919 ), CALR_BOMMO (Q7Z1E6 ), CALR_BOVIN (P52193 ), CALR_CAEBR (Q61KR9 ), CALR_CAEEL (P27798 ), CALR_CHLAE (Q4VIT5 ), CALR_CHLRE (Q9STD3 ), CALR_CRIGR (Q8K3H7 ), CALR_DICDI (Q23858 ), CALR_DROME (P29413 ), CALR_ENTH1 (P83003 ), CALR_EUGGR (Q9ZNY3 ), CALR_HUMAN (P27797 ), CALR_MACFA (Q4R6K8 ), CALR_MACFU (Q2HWU3 ), CALR_MOUSE (P14211 ), CALR_NICPL (Q40401 ), CALR_ONCVO (P11012 ), CALR_ORYSJ (Q9SLY8 ), CALR_PIG (P28491 ), CALR_PRUAR (Q9XF98 ), CALR_RABIT (P15253 ), CALR_RAT (P18418 ), CALR_RICCO (P93508 ), CALR_SCHMA (Q06814 ), CALX1_ARATH (P29402 ), CALX2_ARATH (Q38798 ), CALX_ARTBC (D4AVD4 ), CALX_ASPFU (Q6Q487 ), CALX_CAEBR (A8XA40 ), CALX_CAEEL (P34652 ), CALX_CANLF (P24643 ), CALX_HELTU (Q39994 ), CALX_HUMAN (P27824 ), CALX_MOUSE (P35564 ), CALX_PEA (O82709 ), CALX_PONAB (Q5R440 ), CALX_RAT (P35565 ), CALX_SCHPO (P36581 ), CALX_SOYBN (Q39817 ), CALX_YEAST (P27825 ), CLGN_BOVIN (Q3SYT6 ), CLGN_CANLF (E2RA18 ), CLGN_HUMAN (O14967 ), CLGN_MOUSE (P52194 ), CNE1_CRYNH (J9VLH0 ), CNE1_USTMA (A0A0D1C6P2) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	2 sequences CALR_MAIZE (Q9SP22 ), YOFJ_SCHPO (Q9P7D0 )
UniProtKB/Swiss-Prot 'Partial' sequences	3 sequences CALR_CANLF (P28490 ), CALR_PELLE (P31832 ), CALR_SPIOL (P30806 )
PDB [Detailed view]	12 PDB 1JHN; 3O0V; 3O0W; 3O0X; 3POS; 3POW; 3RG0; 5HCA; 5HCB; 5LK5; 6ENY; 7QPD