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PROSITE entry PS00820


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General information about the entry

Entry name [info] GLUCOAMYLASE
Accession [info] PS00820
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-NOV-1995 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00646
Associated ProRule [info] PRU10051

Name and characterization of the entry

Description [info] Glucoamylase active site region signature.
Pattern [info] 
[STN]-[GP]-x(1,2)-[DE]-x-W-E-E-x(2)-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 88.89 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Site [info] active_site at position 7
Site [info] active_site at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 16 sequences 

AMYG_ASPAW  (P69327), AMYG_ASPKA  (P23176), AMYG_ASPNG  (P69328), 

AMYG_ASPOR  (P36914), AMYG_ASPUS  (P22832), AMYG_BLAAD  (P42042), 
AMYG_CLOS0  (P29761), AMYG_NEUCR  (P14804), AMYG_RHIOR  (P07683), 
AMYG_SACFI  (P08017), AMYG_SCHCM  (D8Q9M3), AMYG_YEAST  (P08019), 
AMYH_SACFI  (P26989), AMYH_YEASX  (P04065), AMYI_YEASX  (P29760), 
Y1610_METJA (Q59005)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

AMYG_AMORE  (Q03045), IMGH_KRIFD  (D2PPM8)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CAS2_SOLTU  (Q9FS29), VPR_HV2D2   (P15837)


				
	

	

		PDB
[Detailed view]		
		
			11 PDB
			


			1AGM; 1AYX; 1DOG; 1GAH; 1GAI; 1GLM; 2F6D; 2FBA; 3EQA; 3GLY; 6FRV