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PROSITE entry PS00820


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General information about the entry

Entry name [info] GLUCOAMYLASE
Accession [info] PS00820
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-NOV-1995 DATA UPDATE;
03-MAY-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00646
Associated ProRule [info] PRU10051

Name and characterization of the entry

Description [info] Glucoamylase active site region signature.
Pattern [info] 
[STN]-[GP]-x(1,2)-[DE]-x-W-E-E-x(2)-[GS].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_02 which contains 569'516 sequence entries.


Total number of hits 18 in 18 different sequences
Number of true positive hits 16 in 16 different sequences
Number of 'unknown' hits 0
Number of false positive hits 2 in 2 different sequences
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 88.89 %
Recall (true positives / (true positives + false negatives)) 88.89 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] active_site at position 4
Site [info] active_site at position 7
Site [info] active_site at position 8
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 16 sequences 

AMYG_ASPAW  (P69327    ), AMYG_ASPKA  (P23176    ), AMYG_ASPNG  (P69328    ), 

AMYG_ASPOR  (P36914    ), AMYG_ASPUS  (P22832    ), AMYG_BLAAD  (P42042    ), 
AMYG_CLOS0  (P29761    ), AMYG_NEUCR  (P14804    ), AMYG_RHIOR  (P07683    ), 
AMYG_SACFI  (P08017    ), AMYG_SCHCM  (D8Q9M3    ), AMYG_YEAST  (P08019    ), 
AMYH_SACFI  (P26989    ), AMYH_YEASX  (P04065    ), AMYI_YEASX  (P29760    ), 
Y1610_METJA (Q59005    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

AMYG_AMORE  (Q03045    ), IMGH_KRIFD  (D2PPM8    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			2 sequences
			


			
CAS2_SOLTU  (Q9FS29    ), VPR_HV2D2   (P15837    )


				
	

	

		PDB
[Detailed view]		
		
			11 PDB
			


			1AGM; 1AYX; 1DOG; 1GAH; 1GAI; 1GLM; 2F6D; 2FBA; 3EQA; 3GLY; 6FRV