PROSITE entry PS00820
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General information about the entry
Entry name [info] | GLUCOAMYLASE |
Accession [info] | PS00820 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00646 |
Associated ProRule [info] | PRU10051 |
Name and characterization of the entry
Description [info] | Glucoamylase active site region signature. |
Pattern [info] |
[STN]-[GP]-x(1,2)-[DE]-x-W-E-E-x(2)-[GS]. |
Numerical results [info]
Total number of hits | 18 in 18 different sequences |
Number of true positive hits | 16 in 16 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 88.89 % |
Recall (true positives / (true positives + false negatives)) | 88.89 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Site [info] | active_site at position 4 |
Site [info] | active_site at position 7 |
Site [info] | active_site at position 8 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
16 sequences
AMYG_ASPAW (P69327 ), AMYG_ASPKA (P23176 ), AMYG_ASPNG (P69328 ), AMYG_ASPOR (P36914 ), AMYG_ASPUS (P22832 ), AMYG_BLAAD (P42042 ), AMYG_CLOS0 (P29761 ), AMYG_NEUCR (P14804 ), AMYG_RHIOR (P07683 ), AMYG_SACFI (P08017 ), AMYG_SCHCM (D8Q9M3 ), AMYG_YEAST (P08019 ), AMYH_SACFI (P26989 ), AMYH_YEASX (P04065 ), AMYI_YEASX (P29760 ), Y1610_METJA (Q59005 )» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
AMYG_AMORE (Q03045 ), IMGH_KRIFD (D2PPM8 ) |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
CAS2_SOLTU (Q9FS29 ), VPR_HV2D2 (P15837 ) |
PDB [Detailed view] |
11 PDB
1AGM; 1AYX; 1DOG; 1GAH; 1GAI; 1GLM; 2F6D; 2FBA; 3EQA; 3GLY; 6FRV |