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Entry: PS00824

General information about the entry

Entry name [info] EF1BD_1
Accession [info] PS00824
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE;
11-DEC-2019 INFO UPDATE.
PROSITE Doc. [info] PDOC00648

Name and characterization of the entry

Description [info] Elongation factor 1 beta/beta'/delta chain signature 1.
Pattern [info] 
[DEG](2)-[DEK]-[DE]-[LIVMF]-D-L-F-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2019_11 which contains 561'568 sequence entries.


Total number of hits 36 in 36 different sequences
Number of true positive hits 35 in 35 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 3
Number of 'partial' sequences 2
Precision (true positives / (true positives + false positives)) 97.22 %
Recall (true positives / (true positives + false negatives)) 92.11 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 35 sequences 

EF1B1_CAEEL (P34460    ), EF1B2_ARATH (Q9SCX3    ), EF1B2_BOMMO (P29522    ), 

EF1B2_CAEEL (Q9U2H9    ), EF1B_ARTSA  (P12262    ), EF1B_BOVIN  (Q5E983    ), 
EF1B_CANAW  (P78590    ), EF1B_CHICK  (Q9YGQ1    ), EF1B_DROME  (O96827    ), 
EF1B_HUMAN  (P24534    ), EF1B_MOUSE  (O70251    ), EF1B_ORYSJ  (P29545    ), 
EF1B_PIG    (P29412    ), EF1B_RABIT  (P34826    ), EF1B_SCHPO  (O74173    ), 
EF1B_TRYCR  (P34827    ), EF1B_WHEAT  (P29546    ), EF1B_XENLA  (P30151    ), 
EF1B_XENTR  (Q6DET9    ), EF1B_YEAST  (P32471    ), EF1D1_ARATH (P48006    ), 
EF1D1_ORYSJ (Q40680    ), EF1D2_ARATH (Q9SI20    ), EF1D2_ORYSJ (Q40682    ), 
EF1D_ARTSA  (P32192    ), EF1D_BETVU  (O81918    ), EF1D_BOVIN  (A5D989    ), 
EF1D_DROME  (Q9VL18    ), EF1D_HUMAN  (P29692    ), EF1D_MACFA  (Q4R3D4    ), 
EF1D_MOUSE  (P57776    ), EF1D_PIMBR  (P93447    ), EF1D_RABIT  (P53787    ), 
EF1D_SHEEP  (Q717R8    ), EF1D_XENLA  (P29693    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 3 sequences 

EF1B1_ARATH (Q84WM9    ), EF1B_DICDI  (Q9GRF8    ), EF1B_PENCI  (Q69BZ7    )


				
	

	

		UniProtKB/Swiss-Prot
'Partial' sequences		
		
			2 sequences
			


			
EF1D_POPEU  (P84973    ), IMPL_MOUSE  (P83891    )


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
LMBL2_MOUSE (P59178    )


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			2MVM; 2MVN; 2N51
				
	





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