PROSITE entry PS00824

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General information about the entry

Entry name [info]	EF1BD_1
Accession [info]	PS00824
Entry type [info]	PATTERN
Date [info]	01-OCT-1993 CREATED; 01-APR-2006 DATA UPDATE; 13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info]	PDOC00648

Name and characterization of the entry

Description [info]	Elongation factor 1 beta/beta'/delta chain signature 1.
Pattern [info]	[DEG](2)-[DEK]-[DE]-[LIVMF]-D-L-F-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.

Total number of hits	36 in 36 different sequences
Number of true positive hits	35 in 35 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	3
Number of 'partial' sequences	2

Precision (true positives / (true positives + false positives))	97.22 %
Recall (true positives / (true positives + false negatives))	92.11 %

Comments [info]

Taxonomic range [info]	Eukaryotes
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	35 sequences EF1B1_CAEEL (P34460), EF1B2_ARATH (Q9SCX3), EF1B2_BOMMO (P29522), EF1B2_CAEEL (Q9U2H9), EF1B_ARTSA (P12262), EF1B_BOVIN (Q5E983), EF1B_CANAW (P78590), EF1B_CHICK (Q9YGQ1), EF1B_DROME (O96827), EF1B_HUMAN (P24534), EF1B_MOUSE (O70251), EF1B_ORYSJ (P29545), EF1B_PIG(P29412), EF1B_RABIT (P34826), EF1B_SCHPO (O74173), EF1B_TRYCR (P34827), EF1B_WHEAT (P29546), EF1B_XENLA (P30151), EF1B_XENTR (Q6DET9), EF1B_YEAST (P32471), EF1D1_ARATH (P48006), EF1D1_ORYSJ (Q40680), EF1D2_ARATH (Q9SI20), EF1D2_ORYSJ (Q40682), EF1D_ARTSA (P32192), EF1D_BETVU (O81918), EF1D_BOVIN (A5D989), EF1D_DROME (Q9VL18), EF1D_HUMAN (P29692), EF1D_MACFA (Q4R3D4), EF1D_MOUSE (P57776), EF1D_RABIT (P53787), EF1D_SHEEP (Q717R8), EF1D_SPUBR (P93447), EF1D_XENLA (P29693) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	3 sequences EF1B1_ARATH (Q84WM9), EF1B_DICDI (Q9GRF8), EF1B_PENCI (Q69BZ7)
UniProtKB/Swiss-Prot 'Partial' sequences	2 sequences EF1D_POPEU (P84973), IMPL_MOUSE (P83891)
UniProtKB/Swiss-Prot False positive sequences	1 sequence LMBL2_MOUSE (P59178)
PDB [Detailed view]	3 PDB 2MVM; 2MVN; 2N51