PROSITE entry PS00837
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General information about the entry
| Entry name [info] | ALADH_PNT_2 |
| Accession [info] | PS00837 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00654 |
Name and characterization of the entry
| Description [info] | Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. |
| Pattern [info] |
[LIVM]-[LIVMF]-G-[GAV]-G-x-[AV]-[GA]-x(2)-[SA]-x(3)-[GA]-x-[SGR]-[LIVM]- [GN]-A-x-V-x(3)-[DE]. |
Numerical results [info]
| Total number of hits | 41 in 41 different sequences |
| Number of true positive hits | 41 in 41 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.23 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
41 sequences
DHA1_STAA3 (Q2FH00 ), DHA1_STAA8 (Q2FYJ2 ), DHA1_STAAB (Q2YY66 ), DHA1_STAAC (Q5HFY4 ), DHA1_STAAM (P63478 ), DHA1_STAAN (P99151 ), DHA1_STAAR (Q6GGW9 ), DHA1_STAAS (Q6G9C3 ), DHA1_STAAW (Q8NWQ3 ), DHA2_STAA3 (Q2FG29 ), DHA2_STAA8 (Q2FXL7 ), DHA2_STAAB (Q2YTD1 ), DHA2_STAAC (Q5HF65 ), DHA2_STAAM (Q931P7 ), DHA2_STAAN (Q99TF4 ), DHA2_STAAR (Q6GFZ8 ), DHA2_STAAS (Q6G8L8 ), DHA2_STAAW (Q8NW54 ), DHA_BACSU (Q08352 ), DHA_BILW3 (E5Y944 ), DHA_BILWA (Q9AIK2 ), DHA_GEOSE (P17557 ), DHA_HALED (E1V931 ), DHA_LYSSH (P17556 ), DHA_METMP (Q6LX40 ), DHA_MYCS2 (A0QVQ8 ), DHA_MYCTO (P9WQB0 ), DHA_MYCTU (P9WQB1 ), DHA_OCEIH (Q8CX61 ), DHA_STAEQ (Q5HNJ6 ), DHA_STAES (Q8CNW8 ), DHA_STAHJ (Q4L750 ), DHA_STAS1 (Q49YD9 ), NNTM_BOVIN (P11024 ), NNTM_HUMAN (Q13423 ), NNTM_MOUSE (Q61941 ), NNTM_SHEEP (W5PFI3 ), PNTAA_RHORT (Q2RSB2 ), PNTAA_RHORU (P0C186 ), PNTA_ECOLI (P07001 ), PNTA_HAEIN (P43842 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
AASS_ARATH (Q9SMZ4 ), AASS_BOVIN (A8E657 ), AASS_HUMAN (Q9UDR5 ), AASS_MOUSE (Q99K67 ), AASS_RAT (A2VCW9 ), PNTA_CERSP (Q9ALA2 )» more |
| PDB [Detailed view] |
30 PDB
1F8G; 1HZZ; 1L7D; 1L7E; 1NM5; 1PTJ; 1U28; 1U2D; 1U2G; 1X13; 1X14; 1X15; 1XLT; 2BRU; 2FR8; 2FRD; 2FSV; 2OO5; 2OOR; 2VHV; 2VHW; 2VHX; 2VHY; 2VHZ; 2VOE; 2VOJ; 6O7F; 6QTI; 6QUE; 6S59 » more |