PROSITE entry PS00839
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General information about the entry
Entry name [info] | SUMT_1 |
Accession [info] | PS00839 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-JUL-1998 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00656 |
Name and characterization of the entry
Description [info] | Uroporphyrin-III C-methyltransferase signature 1. |
Pattern [info] |
[LIVM]-[GS]-[STAL]-G-P-G-x(3)-[LIVMFY]-[LIVM]-T-[LIVM]-[KRHQG]-[AG]. |
Numerical results [info]
Total number of hits | 130 in 130 different sequences |
Number of true positive hits | 130 in 130 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 43 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 75.14 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
130 sequences
CBIF_METJA (Q58973), CBIF_PRIMG (O87696), CBIF_SALTI (P0A2H0), CBIF_SALTY (P0A2G9), CBIL_SALTY (Q05593), COBIJ_MYCBO (P66878), COBIJ_MYCTO (P9WGB2), COBIJ_MYCTU (P9WGB3), COBI_SINSX (P21639), COBM_MYCTO (P9WGB0), COBM_MYCTU (P9WGB1), COBM_PSEAE (Q9HZP9), COBM_RHOCB (O68100), COBM_RHOER (Q53138), COBM_SINSX (P21922), CYSG1_AERS4 (A4SHL4), CYSG1_CROS8 (A7MJ67), CYSG1_KLEP7 (A6TD45), CYSG1_PECAS (Q6D1A4), CYSG1_SERP5 (A8G9Y3), CYSG1_YERE8 (A1JJS8), CYSG1_YERP3 (A7FLY4), CYSG1_YERPN (Q1CLS2), CYSG1_YERPP (A4TGU8), CYSG1_YERPS (Q66EC9), CYSG2_AERHH (A0KP37), CYSG2_AERS4 (A4SRH0), CYSG2_CROS8 (A7MKK9), CYSG2_KLEP7 (A6TF07), CYSG2_PECAS (Q6CZS0), CYSG2_SERP5 (A8GKQ1), CYSG2_YERE8 (A1JSB7), CYSG2_YERP3 (A7FNS9), CYSG2_YERPN (Q1CCP6), CYSG2_YERPP (A4TPZ1), CYSG2_YERPS (Q664M6), CYSG3_AERHH (A0KQJ4), CYSG_ACIAD (Q6F8G6), CYSG_ACTP7 (B3GZA0), CYSG_ACTPJ (B0BTC2), CYSG_ACTSZ (A6VPZ6), CYSG_ALKEH (Q0A812), CYSG_BAUCH (Q1LTP4), CYSG_BLOFL (Q7VQG9), CYSG_BLOPB (Q493N1), CYSG_BORA1 (Q2KWB0), CYSG_BORBR (Q7WMM4), CYSG_BORPA (Q7WB57), CYSG_BORPD (A9HZV6), CYSG_BORPE (Q7VZ77), CYSG_BUCAI (P57500), CYSG_CITK8 (A8AQS4), CYSG_ECO24 (A7ZSP4), CYSG_ECO27 (B7UK79), CYSG_ECO45 (B7MCY5), CYSG_ECO55 (B7L4P2), CYSG_ECO57 (P0AEA9), CYSG_ECO5E (B5YTS6), CYSG_ECO7I (B7NMD7), CYSG_ECO81 (B7N1F1), CYSG_ECO8A (B7M1S1), CYSG_ECOBW (C4ZUM4), CYSG_ECODH (B1X716), CYSG_ECOHS (A8A5H5), CYSG_ECOK1 (A1AGQ2), CYSG_ECOL5 (Q0TC92), CYSG_ECOL6 (Q8FCW8), CYSG_ECOLC (B1IP96), CYSG_ECOLI (P0AEA8), CYSG_ECOLU (B7NDX8), CYSG_ECOSE (B6I2S7), CYSG_ECOSM (B1LHG9), CYSG_ECOUT (Q1R5R3), CYSG_EDWI9 (C5BGP8), CYSG_ENT38 (A4WFH1), CYSG_ESCF3 (B7LS75), CYSG_GLUDA (A9H259), CYSG_GLUOX (Q5FP95), CYSG_MANSM (Q65T49), CYSG_METCA (Q606C9), CYSG_NEIM0 (A9LZ77), CYSG_NEIMA (P57001), CYSG_NEIMB (P95370), CYSG_NEIMF (A1KU10), CYSG_PHOLL (Q7N8L2), CYSG_PHOPR (Q6LM67), CYSG_PSET1 (Q3ILQ9), CYSG_PSYIN (A1SRP9), CYSG_SALA4 (B5F8J0), CYSG_SALAR (A9MME5), CYSG_SALCH (Q57IZ5), CYSG_SALDC (B5FJQ1), CYSG_SALEP (B5R2C7), CYSG_SALG2 (B5R7N6), CYSG_SALHS (B4TKQ4), CYSG_SALNS (B4SVI1), CYSG_SALPA (Q5PLV8), CYSG_SALPB (A9MT45), CYSG_SALPC (C0Q0F3), CYSG_SALPK (B5BH22), CYSG_SALSV (B4TY38), CYSG_SALTI (Q8Z201), CYSG_SALTY (P25924), CYSG_SHIB3 (B2U3H4), CYSG_SHIBS (Q31VS0), CYSG_SHIDS (Q32AZ8), CYSG_SHIF8 (Q0SZU8), CYSG_SHIFL (Q83JB3), CYSG_SHISS (Q3YWQ3), CYSG_SODGM (Q2NVN0), CYSG_TOLAT (C4LAG5), CYSG_YERPA (Q1C2P9), CYSG_YERPE (Q74Y23), CYSG_ZYMMO (Q5NRM4), HEM4_RUMJO (Q59294), NASF_BACSU (P42437), NIRE_PARDP (Q51701), SUMT_BACSU (O34744), SUMT_CYACA (O19889), SUMT_METBF (Q46BL0), SUMT_METIV (P29564), SUMT_METJA (Q58375), SUMT_PRIMG (P29928), SUMT_PSEAE (Q9I2W4), SUMT_PSEFL (P37725), SUMT_SINSX (P21631), SUMT_SYNE7 (P42451), SUMT_SYNY3 (Q55749), SUMT_YEAST (P36150), UPM1_ARATH (Q42606)» more
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UniProtKB/Swiss-Prot False negative sequences |
43 sequences
COBI_PSEAE (Q9HZU3), CYSG1_AERHH (A0KLD7), CYSG1_HALHL (A1WWP8), CYSG2_HALHL (A1WYD5), CYSG_ALCBS (Q0VQ05), CYSG_AZOVD (C1DKY7), CYSG_CHRVO (Q7NZV7), CYSG_HAHCH (Q2SJB7), CYSG_HYDCU (Q31GG8), CYSG_METFK (Q1H3L5), CYSG_NITEC (Q0AHC1), CYSG_NITEU (Q820Q4), CYSG_NITMU (Q2Y6L7), CYSG_NITOC (Q3JCS0), CYSG_PSE14 (Q48H75), CYSG_PSEA6 (Q15YU1), CYSG_PSEA7 (A6V4H6), CYSG_PSEA8 (B7UW11), CYSG_PSEAB (Q02NA3), CYSG_PSEAE (Q9I0M7), CYSG_PSEE4 (Q1IBC9), CYSG_PSEF5 (Q4K9V8), CYSG_PSEFS (C3JY53), CYSG_PSEMY (A4XUX3), CYSG_PSEP1 (A5W1H7), CYSG_PSEPF (Q3KA85), CYSG_PSEPK (Q88FT3), CYSG_PSEPW (B1JBD9), CYSG_PSESM (Q87ZT0), CYSG_PSEU2 (Q4ZRL6), CYSG_PSYA2 (Q4FSU1), CYSG_PSYCK (Q1QAX7), CYSG_PSYWF (A5WEG6), CYSG_RUTMC (A1AVU5), CYSG_SACD2 (Q21K21), CYSG_STUS1 (A4VLU6), CYSG_THIDA (Q3SG32), CYSG_THISH (B8GUD3), CYSG_VESOH (A5CXE4), CYSG_XYLF2 (B2I985), CYSG_XYLFA (Q9PF46), CYSG_XYLFM (B0U4X0), CYSG_XYLFT (Q87AI5)» more |
PDB [Detailed view] |
20 PDB
1CBF; 1PJQ; 1PJS; 1PJT; 1S4D; 2CBF; 3NDC; 3NEI; 6P5X; 6P5Z; 6P7C; 6P7D; 6PQZ; 6PR0; 6PR1; 6PR2; 6PR3; 6PR4; 6ULU; 6VEB » more |