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Entry: PS00841 |
Entry name [info] | XPG_1 |
Accession [info] | PS00841 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00658 |
Description [info] | XPG protein signature 1. |
Pattern [info] |
[VILT]-[KREIT]-[PV]-x-[FYIL]-[VI]-[FW]-D-G-x(2)-[PILHSTF]-x-[LVCQMFAKS]- K. |
Total number of hits | 189 in 189 different sequences |
Number of true positive hits | 189 in 189 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 26 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 87.91 % |
Taxonomic range [info] | Archaea, Eukaryotes, Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Version [info] | 2 |
UniProtKB/Swiss-Prot True positive sequences |
189 sequences
DIN7_YEAST (Q12086 ), ERCC5_HUMAN (P28715 ), ERCC5_MOUSE (P35689 ), ERCC5_XENLA (P14629 ), EXO1_DANRE (Q803U7 ), EXO1_DROME (Q24558 ), EXO1_HUMAN (Q9UQ84 ), EXO1_MOUSE (Q9QZ11 ), EXO1_ORYSJ (Q60GC1 ), EXO1_SCHPO (P53695 ), EXO1_XENLA (Q9W6K2 ), EXO1_YEAST (P39875 ), FEN11_LACBS (B0DSN9 ), FEN11_ORYSI (B8AW67 ), FEN11_ORYSJ (Q9SXQ6 ), FEN11_PHYPA (A9S0B8 ), FEN11_SORBI (C5YUK3 ), FEN12_LACBS (B0E412 ), FEN12_ORYSI (B8AMS4 ), FEN12_ORYSJ (Q75LI2 ), FEN12_PHYPA (A9U328 ), FEN12_SORBI (C5WU23 ), FEN1A_DANRE (Q6TNU4 ), FEN1A_XENLA (P70040 ), FEN1B_XENLA (P70054 ), FEN1_AEDAE (Q178M1 ), FEN1_AJECH (C6HQJ2 ), FEN1_AJECN (A6QV55 ), FEN1_AJEDR (C5GPA7 ), FEN1_ANOFI (C3KJE6 ), FEN1_ANOGA (Q7Q323 ), FEN1_ARATH (O65251 ), FEN1_ARTOC (C5FZT5 ), FEN1_ASHGO (Q75DS8 ), FEN1_ASPCL (A1CJ75 ), FEN1_ASPFC (B0XZ33 ), FEN1_ASPFN (B8NV37 ), FEN1_ASPFU (Q4WWJ1 ), FEN1_ASPNC (A5ABU3 ), FEN1_ASPTN (Q0CBS0 ), FEN1_BLAGS (C5JVG7 ), FEN1_BOVIN (Q58DH8 ), FEN1_BRAFL (C3ZBT0 ), FEN1_BRUMA (A8QCH0 ), FEN1_CAEBR (A8XL25 ), FEN1_CAEEL (Q9N3T2 ), FEN1_CANAL (Q5A6K8 ), FEN1_CANAW (C4YLS2 ), FEN1_CANDC (B9WLQ5 ), FEN1_CANGA (Q6FM28 ), FEN1_CANTT (C5M2X8 ), FEN1_CHICK (Q5ZLN4 ), FEN1_CHLRE (A8J2Z9 ), FEN1_CLAL4 (C4YBJ8 ), FEN1_COPC7 (A8NQC2 ), FEN1_COPCI (Q76F73 ), FEN1_CRYMR (B6AFP1 ), FEN1_CRYNB (P0CS61 ), FEN1_CRYNJ (P0CS60 ), FEN1_CRYPI (A3FPN7 ), FEN1_DEBHA (Q6BLF4 ), FEN1_DICDI (Q54NU0 ), FEN1_DROAN (B3MDA3 ), FEN1_DROER (B3NP61 ), FEN1_DROGR (B4J6M4 ), FEN1_DROME (Q7K7A9 ), FEN1_DROMO (B4KNM1 ), FEN1_DROPE (B4GIM3 ), FEN1_DROPS (B5DUR8 ), FEN1_DROSE (B4HTA1 ), FEN1_DROSI (B4QIG6 ), FEN1_DROVI (B4LM90 ), FEN1_DROWI (B4MR84 ), FEN1_DROYA (B4P5U9 ), FEN1_EMENI (Q5B9L6 ), FEN1_ENTDS (B0EN90 ), FEN1_ENTHI (C4M6G8 ), FEN1_FUSV7 (C7Z125 ), FEN1_GLOMM (D3TQJ5 ), FEN1_HUMAN (P39748 ), FEN1_KLULA (Q6CLH4 ), FEN1_KOMPG (C4QZ20 ), FEN1_LACTC (C5DGG4 ), FEN1_LEIBR (A4HFE4 ), FEN1_LEIIN (A4I2L4 ), FEN1_LEIMA (Q4FYU7 ), FEN1_LODEL (A5E121 ), FEN1_MACFA (Q4R5U5 ), FEN1_MAGO7 (A4QS18 ), FEN1_MAIZE (B4FHY0 ), FEN1_MICCC (C1E3X9 ), FEN1_MONBE (A9VB27 ), FEN1_MOUSE (P39749 ), FEN1_NAEGR (D2V434 ), FEN1_NEMVE (A7RRJ0 ), FEN1_NEOFI (A1D8A4 ), FEN1_NEUCR (A7UW97 ), FEN1_OSMMO (C1BM18 ), FEN1_OSTLU (A4S1G4 ), FEN1_OSTTA (Q013G9 ), FEN1_PENRW (B6HEM2 ), FEN1_PHANO (Q0UZR3 ), FEN1_PHATC (B7G7Y7 ), FEN1_PHYIT (D0MY34 ), FEN1_PICGU (A5DCF5 ), FEN1_PICST (A3M056 ), FEN1_PLABA (Q4Z015 ), FEN1_PLACH (Q4XXP8 ), FEN1_PLAF7 (Q7K734 ), FEN1_PLAFA (Q9GZ01 ), FEN1_PLAKH (B3L014 ), FEN1_PLAVS (A5KAL1 ), FEN1_PLAYO (Q7RME3 ), FEN1_POLPP (D3BN56 ), FEN1_PYRTR (B2VTT3 ), FEN1_RAT (Q5XIP6 ), FEN1_SALSA (B9EMY6 ), FEN1_SCHJY (B6JYI7 ), FEN1_SCHPO (P39750 ), FEN1_SHEEP (C8BKD0 ), FEN1_SORMK (D1ZT73 ), FEN1_SOYBN (C6TEX6 ), FEN1_TALMQ (B6QT52 ), FEN1_TALSN (B8MNF2 ), FEN1_THAPS (B8C6S5 ), FEN1_TRIAD (B3RVF0 ), FEN1_TRYB2 (Q57WW6 ), FEN1_TRYB9 (C9ZKW4 ), FEN1_TRYCC (Q4DKQ5 ), FEN1_UNCRE (C4JDR3 ), FEN1_USTMA (Q4P1V1 ), FEN1_VANPO (A7TJ59 ), FEN1_XENTR (B1H158 ), FEN1_XIPMA (Q5I4H3 ), FEN1_YARLI (Q6C116 ), FEN1_YEAS1 (B3LQY3 ), FEN1_YEAS2 (C7GVJ8 ), FEN1_YEAS7 (A6ZZK4 ), FEN1_YEAS8 (C8ZC62 ), FEN1_YEAST (P26793 ), FEN1_ZYGRC (C5DZA9 ), FEN_AERPE (Q9YFY5 ), FEN_ARCFU (O29975 ), FEN_CALMQ (A8M9L3 ), FEN_CENSY (A0RU95 ), FEN_HALS3 (B0R5F5 ), FEN_HALSA (Q9HQ27 ), FEN_HALWD (Q18HK0 ), FEN_IGNH4 (A8AAC1 ), FEN_KORCO (B1L6R9 ), FEN_METAC (Q8TIY5 ), FEN_METB6 (A7IA59 ), FEN_METBF (Q46D63 ), FEN_METBU (Q12UT1 ), FEN_METHJ (Q2FNC9 ), FEN_METKA (Q8TXU4 ), FEN_METLZ (A2SQC6 ), FEN_METMA (Q8PYF6 ), FEN_METMJ (A3CWV2 ), FEN_METPE (B8GIA0 ), FEN_METS3 (A5UL52 ), FEN_METST (Q2NFD4 ), FEN_METTH (O27670 ), FEN_METTP (A0B9M7 ), FEN_NANEQ (P61942 ), FEN_NATPD (Q3IPG8 ), FEN_NITMS (A9A4B0 ), FEN_PICTO (Q6L2I9 ), FEN_PYRAB (Q9V0P9 ), FEN_PYRAE (Q8ZYN2 ), FEN_PYRAR (A4WNC4 ), FEN_PYRCJ (A3MY15 ), FEN_PYRFU (O93634 ), FEN_PYRHO (O50123 ), FEN_PYRIL (A1RSC7 ), FEN_PYRNV (B1YC46 ), FEN_SACS2 (Q980U8 ), FEN_SULAC (Q4JAN1 ), FEN_SULTO (Q976H6 ), FEN_THEAC (Q9HJD4 ), FEN_THEGJ (C5A639 ), FEN_THEKO (Q5JGN0 ), FEN_THEON (B6YWX4 ), FEN_THEPD (A1RWY2 ), FEN_THESM (C6A1U9 ), FEN_THEVO (Q97B98 ), RAD13_SCHPO (P28706 ), RAD2_YEAST (P07276 ), UVH3_ARATH (Q9ATY5 )» more
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UniProtKB/Swiss-Prot False negative sequences |
26 sequences
EXO1_ARATH (Q8L6Z7 ), FEN11_PARTE (A0CXT3 ), FEN12_PARTE (A0CYG2 ), FEN1B_DANRE (B0UXL7 ), FEN1_BABBO (A7AX58 ), FEN1_ENCCU (Q8SS91 ), FEN1_ENTBH (B7XHS8 ), FEN1_GIAIC (A8B672 ), FEN1_TETTS (A4VDN2 ), FEN1_THEAN (Q4UFP0 ), FEN1_THEPA (Q4N3S6 ), FEN_HALMA (Q5V5T7 ), FEN_HYPBU (A2BMI0 ), FEN_META3 (A6UX46 ), FEN_METAR (Q0W6I0 ), FEN_METJA (Q58839 ), FEN_STAMF (A3DMG2 ), GENL1_ARATH (Q9LPD2 ), GENL1_ORYSJ (Q64MA3 ), GENL2_ARATH (Q9M2Z3 ), GENL2_ORYSJ (Q8W5R1 ), GEN_DROME (Q9VRJ0 ), GEN_DROPS (Q29FC1 ), GEN_HUMAN (Q17RS7 ), GEN_MOUSE (Q8BMI4 ), VF369_IIV6 (Q91FF5 )» more |
PDB [Detailed view] |
38 PDB
1B43; 1MC8; 1RXV; 1RXW; 1UL1; 2IZO; 3Q8K; 3Q8L; 3Q8M; 3QE9; 3QEA; 3QEB; 4Q0R; 4Q0W; 4Q0Z; 4Q10; 4WA8; 5FV7; 5K97; 5KSE; 5UZV; 5V04; 5V05; 5V06; 5V07; 5V08; 5V09; 5V0A; 5V0B; 5V0C; 5V0D; 5V0E; 5ZOD; 5ZOE; 5ZOF; 5ZOG; 6TNZ; 6VBH » more |