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PROSITE entry PS00845


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General information about the entry

Entry name [info] CAP_GLY_1
Accession [info] PS00845
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00660

Name and characterization of the entry

Description [info] CAP-Gly domain signature.
Pattern [info] 
[GD]-x(0,10)-[FYWA]-x(0,1)-G-[LIVM]-x(0,2)-[LIVMFYD]-x(0,7)-G-[KN]-[NHW]-
x(0,1)-G-[STARCV]-x(0,2)-[GD]-x(0,2)-[LY]-[FC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_06 which contains 572'619 sequence entries.


Total number of hits 68 in 54 different sequences
Number of true positive hits 67 in 53 different sequences
Number of 'unknown' hits 0
Number of false positive hits 1
Number of false negative sequences 2
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.53 %
Recall (true positives / (true positives + false negatives)) 97.10 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 2
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 53 sequences 

ALP11_SCHPO (Q10235), BIK1_YEAST  (P11709), CE350_HUMAN (Q5VT06), 

CE350_MOUSE (E9Q309), CL190_DROME (Q9VJE5), CLIP1_CHICK (O42184), 
CLIP1_HUMAN (P30622), CLIP1_MOUSE (Q922J3), CLIP1_RAT   (Q9JK25), 
CLIP2_HUMAN (Q9UDT6), CLIP2_MOUSE (Q9Z0H8), CLIP2_RAT   (O55156), 
CLIP3_HUMAN (Q96DZ5), CLIP3_MOUSE (B9EHT4), CLIP3_PONAB (Q5R686), 
CLIP3_XENLA (Q5U243), CLIP4_HUMAN (Q8N3C7), CLIP4_MOUSE (Q8CI96), 
CLIP4_RAT   (Q66HD5), CLP1H_CAEEL (P34531), CYLD_BOVIN  (Q1RMU2), 
CYLD_HUMAN  (Q9NQC7), CYLD_MOUSE  (Q80TQ2), CYLD_PONAB  (Q5RED8), 
CYLD_RAT(Q66H62), DCTN1_CHICK (P35458), DCTN1_DROME (P13496), 
DCTN1_HUMAN (Q14203), DCTN1_MOUSE (O08788), DCTN1_PIG   (A0A287B8J2), 
DCTN1_RAT   (P28023), DCTN1_XENLA (Q6PCJ1), DYNA_NEUCR  (Q01397), 
KI13B_HUMAN (Q9NQT8), NIP80_YEAST (P33420), PAC2_YEAST  (P39937), 
SSM4_SCHPO  (O42667), TBCB_BOVIN  (Q5E951), TBCB_CAEEL  (Q20728), 
TBCB_DICDI  (Q54Z01), TBCB_HUMAN  (Q99426), TBCB_MOUSE  (Q9D1E6), 
TBCB_YEAST  (P53904), TBCE_ARATH  (Q8GRL7), TBCE_BOVIN  (Q32KS0), 
TBCE_DANRE  (Q5U378), TBCE_DICDI  (Q55CN0), TBCE_HUMAN  (Q15813), 
TBCE_MOUSE  (Q8CIV8), TBCE_PONAB  (Q5RBD9), TBCE_RAT(Q5FVQ9), 
TBCE_XENLA  (Q5U508), TIP1_SCHPO  (P79065)
» more

UniProtKB/Swiss-Prot
False negative sequences		 2 sequences 

TBCB_ARATH  (Q67Z52), TBCE_DROME  (A1Z6J5)


				
	

	

		UniProtKB/Swiss-Prot
False positive sequences		
		
			1 sequence
			


			
YETA_BACSU  (O31530)


				
	

	

		PDB
[Detailed view]		
		
			39 PDB
			


			1LPL; 1TOV; 1TXQ; 1WHG; 1WHH; 1WHK; 1WHM; 2COW; 2COY; 2COZ; 2CP0; 2CP2; 
			
				2CP3; 2CP5; 2CP6; 2CP7; 2E3H; 2E3I; 2E4H; 2HKN; 2HKQ; 2HL3; 2HL5; 2HQH; 
				2M02; 2MPX; 2QK0; 2Z0W; 3E2U; 3RDV; 3TQ7; 6FC5; 6FC6; 6ZNL; 7Z8F; 8PQW; 
				8PQZ; 8PR0; 8PTK
			
			

			» more