PROSITE entry PS00846
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General information about the entry
Entry name [info] | HTH_ARSR_1 |
Accession [info] | PS00846 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-NOV-1995 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00661 |
Name and characterization of the entry
Description [info] | Bacterial regulatory proteins, arsR family signature. |
Pattern [info] |
C-x(2)-D-[LIVM]-x(6)-[ST]-x(4)-S-[HYR]-[HQ]. |
Numerical results [info]
Total number of hits | 15 in 15 different sequences |
Number of true positive hits | 14 in 14 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 36 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 93.33 % |
Recall (true positives / (true positives + false negatives)) | 28.00 % |
Comments [info]
Taxonomic range [info] | Archaea, Prokaryotes (Bacteria), Eukaryotic viruses |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
14 sequences
ARSR1_ECOLX (P15905), ARSR2_ECOLX (P52144), ARSR_BACSU (P45949), ARSR_ECOLI (P37309), ARSR_STAAU (P30338), ARSR_STAXY (Q01256), CADC_ALKPO (P30339), CADC_LACLL (P0A4U3), CADC_LISIN (P0A4U2), CADC_LISMN (Q56405), CADC_STAAU (P20047), CADF_STAAU (P37374), SMTB_SYNE7 (P30340), ZIAR_SYNY3 (Q55940)» more
|
UniProtKB/Swiss-Prot False negative sequences |
36 sequences
ARSR1_PSEPK (Q88LK1), ARSR2_PSEPK (Q88JD1), ASER_BACSU (P96677), B115_SSV1 (P0C7L5), BIGR_AGRFC (Q8UAA8), BIGR_XYLFA (Q9PFB1), BIGR_XYLFT (Q87AD5), CMTR_MYCBO (P67732), CMTR_MYCTO (P9WMI8), CMTR_MYCTU (P9WMI9), CZRA_BACSU (O31844), HLYU_VIBCH (P52695), HTHAR_MYCTU (O53478), KMTR_MYCTU (O53838), MERR_STRLI (P30346), NMTR_MYCTU (O69711), NOLR_RHIML (P28267), PAGR_BACAN (O31178), SDPR_BACSU (O32242), SMTB_MYCTO (P9WMI4), SMTB_MYCTU (P9WMI5), Y0081_MYCTO (P9WMI6), Y0081_MYCTU (P9WMI7), Y1325_METJA (Q58721), Y1398_METJA (Q58793), Y1553_METJA (Q58948), Y1563_METJA (Q58958), Y229_METJA (Q57682), Y361_METJA (Q57807), Y774_METJA (Q58184), YBZH_BACSU (C0H3S9), YCEK_BACSU (O34464), YCZG_BACSU (O31480), YDFF_BACSU (P96683), YGAV_ECOLI (P77295), YUZN_BACSU (C0H3Q8)» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
T121B_MOUSE (Q99MX7) |
PDB [Detailed view] |
5 PDB
1R1T; 1R23; 1SMT; 1U2W; 3F72 |