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PURL:
https://purl.expasy.org/prosite/signature/PS00848
Direct ScanProsite submission
General information about the entry
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Entry name
[info]
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COX5B_1
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Accession
[info]
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PS00848
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Entry type
[info]
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PATTERN
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Date
[info]
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01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
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PROSITE Doc.
[info]
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PDOC00663
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Name and characterization of the entry
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Description
[info]
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Cytochrome c oxidase subunit Vb, zinc binding region signature.
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Pattern
[info]
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[LIVM](2)-[FYW]-x(10)-C-x(2)-C-G-x(2)-[FY]-K-L.
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Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.
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Total number of hits
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13 in 13 different sequences
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Number of true positive hits
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10 in 10 different sequences
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Number of 'unknown' hits
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0
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Number of false positive hits
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3 in 3 different sequences
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Number of false negative sequences
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3
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Number of 'partial' sequences
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4
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Precision (true positives / (true positives + false positives))
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76.92 %
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Recall (true positives / (true positives + false negatives))
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76.92 %
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Taxonomic range
[info]
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Eukaryotes |
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Maximum number of repetitions
[info]
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1 |
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Site
[info]
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zinc(?) at position 4 |
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Site
[info]
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zinc(?) at position 6 |
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Version
[info]
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1 |
UniProtKB/Swiss-Prot
True positive sequences |
10 sequences
COX4_SCHPO (P79010), COX4_YEAST (P04037), COX5B_BOVIN (P00428),
COX5B_HUMAN (P10606), COX5B_MOUSE (P19536), COX5B_PIG (Q5S3G4),
COX5B_PONAB (Q5REG2), COX5B_RAT (P12075), COX5B_VULVU (Q710D6),
COX5_DICDI (P29505)
» more
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UniProtKB/Swiss-Prot
False negative sequences |
3 sequences
COX4_NEUCR (P06809), CX5B1_ARATH (Q9LW15), CX5B2_ARATH (Q9SSB8)
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UniProtKB/Swiss-Prot
'Partial' sequences |
4 sequences
COX5B_SOLTU (P80499), COX5B_THUOB (P80974), CX5B1_ONCMY (P80329),
CX5B2_ONCMY (P80330)
» more
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UniProtKB/Swiss-Prot
False positive sequences |
3 sequences
ACCD_CLOP1 (Q0TRG3), ACCD_CLOPE (Q8XLG6), ACCD_CLOPS (Q0STU2)
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PDB
[Detailed view] |
110 PDB
pdb_00001occ; pdb_00001oco; pdb_00001ocr; pdb_00001ocz; pdb_00001v54; pdb_00001v55; pdb_00002dyr; pdb_00002dys; pdb_00002eij; pdb_00002eik; pdb_00002eil; pdb_00002eim;
pdb_00002ein; pdb_00002occ; pdb_00002odx; pdb_00002y69; pdb_00002ybb; pdb_00002zxw; pdb_00003abk; pdb_00003abl; pdb_00003abm; pdb_00003ag1; pdb_00003ag2; pdb_00003ag3;
pdb_00003ag4; pdb_00003asn; pdb_00003aso; pdb_00003wg7; pdb_00003x2q; pdb_00005b1a; pdb_00005b1b; pdb_00005b3s; pdb_00005gpn; pdb_00005iy5; pdb_00005luf; pdb_00005w97;
pdb_00005wau; pdb_00005x19; pdb_00005x1b; pdb_00005x1f; pdb_00005xdq; pdb_00005xdx; pdb_00005xth; pdb_00005xti; pdb_00005z62; pdb_00005z84; pdb_00005z85; pdb_00005z86;
pdb_00005zco; pdb_00005zcp; pdb_00005zcq; pdb_00006giq; pdb_00006hu9; pdb_00006j8m; pdb_00006juw; pdb_00006jy3; pdb_00006jy4; pdb_00006nkn; pdb_00006nmf; pdb_00006nmp;
pdb_00006t0b; pdb_00006t15; pdb_00006ymx; pdb_00006ymy; pdb_00007coh; pdb_00007cp5; pdb_00007d5w; pdb_00007d5x; pdb_00007dgq; pdb_00007dgr; pdb_00007dgs; pdb_00007dkf;
pdb_00007ev7; pdb_00007o37; pdb_00007o3c; pdb_00007o3e; pdb_00007thu; pdb_00007tie; pdb_00007tih; pdb_00007tii; pdb_00007vuw; pdb_00007vvr; pdb_00007w3e; pdb_00007xma;
pdb_00007xmb; pdb_00007y44; pdb_00007ypy; pdb_00007z10; pdb_00008c8q; pdb_00008d4t; pdb_00008dh6; pdb_00008e7s; pdb_00008ec0; pdb_00008gbt; pdb_00008gcq; pdb_00008gvm;
pdb_00008h8r; pdb_00008h8s; pdb_00008ijn; pdb_00008pw5; pdb_00008pw6; pdb_00008pw7; pdb_00008q1b; pdb_00008ugh; pdb_00008ugi; pdb_00008ugj; pdb_00008ugl; pdb_00008ugn;
pdb_00008ugr; pdb_00009etz
» more
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