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Entry: PS00848 |
Entry name [info] | COX5B_1 |
Accession [info] | PS00848 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00663 |
Description [info] | Cytochrome c oxidase subunit Vb, zinc binding region signature. |
Pattern [info] |
[LIVM](2)-[FYW]-x(10)-C-x(2)-C-G-x(2)-[FY]-K-L. |
Total number of hits | 13 in 13 different sequences |
Number of true positive hits | 10 in 10 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 3 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 76.92 % |
Recall (true positives / (true positives + false negatives)) | 76.92 % |
Taxonomic range [info] | Eukaryotes |
Maximum number of repetitions [info] | 1 |
Site [info] | zinc(?) at position 4 |
Site [info] | zinc(?) at position 6 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
10 sequences
COX4_SCHPO (P79010 ), COX4_YEAST (P04037 ), COX5B_BOVIN (P00428 ), COX5B_HUMAN (P10606 ), COX5B_MOUSE (P19536 ), COX5B_PIG (Q5S3G4 ), COX5B_PONAB (Q5REG2 ), COX5B_RAT (P12075 ), COX5B_VULVU (Q710D6 ), COX5_DICDI (P29505 )» more
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UniProtKB/Swiss-Prot False negative sequences |
3 sequences
COX4_NEUCR (P06809 ), CX5B1_ARATH (Q9LW15 ), CX5B2_ARATH (Q9SSB8 ) |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
COX5B_SOLTU (P80499 ), COX5B_THUOB (P80974 ), CX5B1_ONCMY (P80329 ), CX5B2_ONCMY (P80330 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
ACCD_CLOP1 (Q0TRG3 ), ACCD_CLOPE (Q8XLG6 ), ACCD_CLOPS (Q0STU2 ) |
PDB [Detailed view] |
64 PDB
1OCC; 1OCO; 1OCR; 1OCZ; 1V54; 1V55; 2DYR; 2DYS; 2EIJ; 2EIK; 2EIL; 2EIM; 2EIN; 2OCC; 2ODX; 2Y69; 2YBB; 2ZXW; 3ABK; 3ABL; 3ABM; 3AG1; 3AG2; 3AG3; 3AG4; 3ASN; 3ASO; 3WG7; 3X2Q; 5B1A; 5B1B; 5B3S; 5GPN; 5IY5; 5LUF; 5W97; 5WAU; 5X19; 5X1B; 5X1F; 5XDQ; 5XDX; 5XTH; 5XTI; 5Z62; 5Z84; 5Z85; 5Z86; 5ZCO; 5ZCP; 5ZCQ; 6GIQ; 6HU9; 6J8M; 6JUW; 6JY3; 6JY4; 6NKN; 6NMF; 6NMP; 6T0B; 6T15; 6YMX; 6YMY » more |