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PROSITE entry PS00854


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General information about the entry

Entry name [info] PROTEASOME_BETA_1
Accession [info] PS00854
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-JUL-2013 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00668

Name and characterization of the entry

Description [info] Proteasome beta-type subunits signature.
Pattern [info] 
[LIVMACFT]-[GSA]-[LIVMF]-x-[FYLVGAC]-x(2)-[GSACFYI]-[LIVMSTACF]-
[LIVMSTAC]-[LIVMFSTAC]-[GACI]-[GSTACV]-[DES]-x(15,16)-[RK]-x(12,13)-G-
x(2)-[GSTA]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 218 in 218 different sequences
Number of true positive hits 207 in 207 different sequences
Number of 'unknown' hits 0
Number of false positive hits 11 in 11 different sequences
Number of false negative sequences 95
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.95 %
Recall (true positives / (true positives + false negatives)) 68.54 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 207 sequences 

PB6LA_SALSA (A7KE01), PB6LB_SALSA (A7KII6), PSB10_BOVIN (Q3T0T1), 

PSB10_HUMAN (P40306), PSB10_MOUSE (O35955), PSB10_RAT   (Q4KM35), 
PSB11_HUMAN (A5LHX3), PSB11_MOUSE (Q8BG41), PSB1A_CARAU (Q9IB84), 
PSB1B_CARAU (Q9IB83), PSB1_AERPE  (Q9YES4), PSB1_ARATH  (P42742), 
PSB1_BOVIN  (Q2TBX6), PSB1_CAEEL  (P34286), PSB1_CENSY  (A0RU86), 
PSB1_DANRE  (Q6DRF3), PSB1_DICDI  (Q86A21), PSB1_DROME  (P40304), 
PSB1_ENCCU  (Q8SR11), PSB1_HUMAN  (P20618), PSB1_HYPBU  (A2BN24), 
PSB1_IGNH4  (A8AA46), PSB1_KORCO  (B1L6S7), PSB1_METS5  (A4YIE0), 
PSB1_MOUSE  (O09061), PSB1_NITMS  (A9A4A1), PSB1_ORYSJ  (O64464), 
PSB1_PETHY  (O82531), PSB1_PYRAB  (Q9V247), PSB1_PYRAE  (Q8ZYF2), 
PSB1_PYRAR  (A4WH05), PSB1_PYRCJ  (A3MS44), PSB1_PYRFU  (Q8U4C9), 
PSB1_PYRHO  (O57983), PSB1_PYRIL  (A1RSJ8), PSB1_PYRNV  (B1YA36), 
PSB1_RAT(P18421), PSB1_SACS2  (Q980L4), PSB1_SACS9  (D0KRX1), 
PSB1_SCHPO  (O43063), PSB1_STAMF  (A3DN21), PSB1_SULIA  (C3N5N4), 
PSB1_SULID  (D2PK63), PSB1_SULIK  (C4KHB0), PSB1_SULIL  (C3MQ16), 
PSB1_SULIM  (C3MVD5), PSB1_SULIN  (C3NFX2), PSB1_SULIY  (C3NE98), 
PSB1_SULTO  (Q975U8), PSB1_THEGJ  (C5A7L1), PSB1_THEKO  (Q5JDJ9), 
PSB1_THEON  (B6YSW2), PSB1_THEPD  (A1RWY6), PSB1_TRYBB  (Q9U794), 
PSB1_YEAST  (P38624), PSB2A_ARATH (O23714), PSB2B_ARATH (O24633), 
PSB2_BOVIN  (Q5E9K0), PSB2_CALMQ  (A8M8R5), PSB2_CENSY  (A0RXV1), 
PSB2_DROME  (Q9VQE5), PSB2_ENCCU  (Q8SQN7), PSB2_HUMAN  (P49721), 
PSB2_HYPBU  (A2BN27), PSB2_KORCO  (B1L6X8), PSB2_MOUSE  (Q9R1P3), 
PSB2_NITMS  (A9A2U7), PSB2_ORYSJ  (Q9LST6), PSB2_PYRAB  (Q9V0N9), 
PSB2_PYRAE  (Q8ZST5), PSB2_PYRAR  (A4WMZ0), PSB2_PYRFU  (Q8U125), 
PSB2_PYRHO  (O50110), PSB2_PYRIL  (A1RTI7), PSB2_PYRNV  (B1YDJ0), 
PSB2_RAT(P40307), PSB2_SACS2  (Q9UXF3), PSB2_SACS9  (D0KTH0), 
PSB2_SCHPO  (Q09841), PSB2_STAMF  (A3DN27), PSB2_SULAC  (Q4JAA8), 
PSB2_SULIA  (C3MZI0), PSB2_SULID  (D2PDG6), PSB2_SULIK  (C4KIR0), 
PSB2_SULIL  (C3MRE5), PSB2_SULIM  (C3MY41), PSB2_SULIN  (C3NHF1), 
PSB2_SULIY  (C3N7K2), PSB2_SULTO  (Q975D1), PSB2_THEGJ  (C5A2D5), 
PSB2_THEON  (B6YXV3), PSB2_THEPD  (A1RX71), PSB2_THESM  (C6A3R1), 
PSB2_YEAST  (P25043), PSB3A_ARATH (Q9XI05), PSB3B_ARATH (O81153), 
PSB3_BOVIN  (P33672), PSB3_CAEEL  (Q23237), PSB3_DROME  (Q9XYN7), 
PSB3_GIAIN  (Q9N9W8), PSB3_HUMAN  (P49720), PSB3_MOUSE  (Q9R1P1), 
PSB3_ONCMY  (O73817), PSB3_ORYSJ  (Q9LST7), PSB3_PICMA  (O65084), 
PSB3_RAT(P40112), PSB3_SCHPO  (Q9Y7T8), PSB3_TRYBB  (Q9NDA1), 
PSB3_YEAST  (P25451), PSB4_ARATH  (Q7DLR9), PSB4_BOVIN  (Q3T108), 
PSB4_CRYNB  (P0CQ13), PSB4_CRYNJ  (P0CQ12), PSB4_DICDI  (Q556Q0), 
PSB4_DROME  (Q9VNA5), PSB4_ENCCU  (Q8SRF1), PSB4_HUMAN  (P28070), 
PSB4_MOUSE  (P99026), PSB4_NEUCR  (Q9P6U7), PSB4_PICGU  (A5DB52), 
PSB4_PIG(Q29384), PSB4_RAT(P34067), PSB4_SCHPO  (Q09720), 
PSB4_XENLA  (P28024), PSB4_YEAST  (P22141), PSB5A_ARATH (O23717), 
PSB5B_ARATH (Q9LIP2), PSB5_BOVIN  (Q32KL2), PSB5_CHICK  (P34065), 
PSB5_HUMAN  (P28074), PSB5_MOUSE  (O55234), PSB5_PONAB  (Q5R8S2), 
PSB5_RAT(P28075), PSB5_SCHPO  (P30655), PSB5_SPIOL  (O24361), 
PSB5_YEAST  (P30656), PSB6_ARATH  (Q8LD27), PSB6_BOVIN  (Q3MHN0), 
PSB6_DICDI  (Q55GJ6), PSB6_HUMAN  (P28072), PSB6_MOUSE  (Q60692), 
PSB6_RAT(P28073), PSB6_SCHPO  (Q9UQY2), PSB6_TOBAC  (P93395), 
PSB6_YEAST  (P23724), PSB7A_ARATH (O23710), PSB7B_ARATH (Q7DLS1), 
PSB7_BOVIN  (Q2TBP0), PSB7_DICDI  (Q54QR2), PSB7_ENCCU  (Q8SS01), 
PSB7_HUMAN  (Q99436), PSB7_MOUSE  (P70195), PSB7_PIG(A1XQU1), 
PSB7_RAT(Q9JHW0), PSB7_SCHPO  (Q9USQ9), PSB7_YEAST  (P30657), 
PSB8_BOVIN  (Q3T112), PSB8_CANLF  (Q5W416), PSB8_HUMAN  (P28062), 
PSB8_MOUSE  (P28063), PSB8_RAT(P28064), PSB9_BOVIN  (Q3SZC2), 
PSB9_HUMAN  (P28065), PSB9_MOUSE  (P28076), PSB9_MUSMB  (O35522), 
PSB9_MUSPL  (O35523), PSB9_MUSSI  (O35524), PSB9_MUSTR  (O35521), 
PSB9_ONCMY  (Q9PT26), PSB9_ORYLA  (Q8UW64), PSB9_RAT(P28077), 
PSB9_SALSA  (Q9DD33), PSB_ARCFU   (Q9P996), PSB_ARCPA   (D2RGT4), 
PSB_FERPA   (D3RX66), PSB_META3   (A6UT20), PSB_METAC   (Q8TJB5), 
PSB_METAR   (Q0W2D6), PSB_METB6   (A7I841), PSB_METBF   (Q46G14), 
PSB_METBU   (Q12YV7), PSB_METFA   (C7P6N4), PSB_METHJ   (Q2FQL8), 
PSB_METJA   (Q58634), PSB_METKA   (Q8TW10), PSB_METLZ   (A2SS78), 
PSB_METM5   (A4FYA5), PSB_METM6   (A9A788), PSB_METM7   (A6VK02), 
PSB_METMA   (Q8PZ04), PSB_METMJ   (A3CUS9), PSB_METMP   (Q6LZD4), 
PSB_METMS   (D5EAS6), PSB_METPE   (B8GG66), PSB_METPS   (D1Z199), 
PSB_METRM   (D3E0A3), PSB_METS3   (A5UM14), PSB_METSF   (D3S8M7), 
PSB_METTE   (Q9P992), PSB_METTH   (O27270), PSB_METTP   (A0B5B1), 
PSB_METVM   (C9REN7), PSB_METVS   (A6USJ3), PSB_NANEQ   (Q74MP5), 
PSB_PICTO   (Q6L181), PSB_THEAC   (P28061), PSB_THEVO   (Q97AZ7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 95 sequences 

PBS5_CAEEL  (Q9XUV0), PSB1_CALMQ  (A8MBW0), PSB1_DESA1  (B8D673), 

PSB1_HALMA  (Q5V4S6), PSB1_HALTV  (D2RQX3), PSB1_RHOER  (Q53079), 
PSB1_SALTO  (A4X3P0), PSB1_STRAW  (Q82JE3), PSB1_SULAC  (Q4JAY3), 
PSB1_THECD  (D1A2S9), PSB1_THESM  (C6A2V9), PSB2_AERPE  (Q9YER0), 
PSB2_CAEEL  (P91477), PSB2_DESA1  (B8D683), PSB2_DICDI  (Q55DY7), 
PSB2_HALMA  (Q5V1D5), PSB2_HALTV  (D2RUI0), PSB2_IGNH4  (A8AB58), 
PSB2_METS5  (A4YJ04), PSB2_PYRCJ  (A3MXQ6), PSB2_RHOER  (Q53083), 
PSB2_SALTO  (A4X744), PSB2_STRAW  (Q828I8), PSB2_THECD  (D1A3V2), 
PSB2_THEKO  (Q5JHL8), PSB2_TRYBB  (Q9NHC6), PSB3_DICDI  (Q55D66), 
PSB5_DICDI  (Q54BC8), PSB6_ENCCU  (Q8SRH6), PSB_ACIB4   (B5IEE5), 
PSB_ACIC1   (A0LU50), PSB_ACIFD   (C7LYP7), PSB_ACTMD   (C6WID8), 
PSB_ARTS2   (A0JWY6), PSB_BEUC1   (C5BVA2), PSB_CATAD   (C7PVV2), 
PSB_FRAAA   (Q0RLT7), PSB_FRACC   (Q2J9Q3), PSB_FRASN   (A8LH54), 
PSB_GEOOG   (D2S6E2), PSB_GORB4   (D0LDT1), PSB_HALLT   (B9LTS6), 
PSB_HALMD   (C7NVQ4), PSB_HALS3   (B0R4C8), PSB_HALSA   (Q9HR36), 
PSB_HALUD   (C7NQ99), PSB_HALVD   (D4GYZ1), PSB_HALWD   (Q18GX3), 
PSB_JONDD   (C7R403), PSB_KINRD   (A6W970), PSB_KRIFD   (D2Q4H4), 
PSB_METST   (Q2NI68), PSB_MYCA1   (A0QFB5), PSB_MYCA9   (B1MAI2), 
PSB_MYCBO   (Q7TZ13), PSB_MYCBP   (A1KKF3), PSB_MYCBT   (C1AQ26), 
PSB_MYCGI   (A4TB64), PSB_MYCLB   (B8ZRF3), PSB_MYCLE   (Q49780), 
PSB_MYCMM   (B2HFV6), PSB_MYCPA   (Q73YW8), PSB_MYCS2   (A0QZ47), 
PSB_MYCSJ   (A3Q193), PSB_MYCSK   (A1UHS7), PSB_MYCSS   (Q1B797), 
PSB_MYCTA   (A5U4D6), PSB_MYCTF   (A5WP84), PSB_MYCTK   (C6DPV1), 
PSB_MYCTO   (P9WHT8), PSB_MYCTU   (P9WHT9), PSB_MYCUA   (A0PQT3), 
PSB_MYCVP   (A1TAP4), PSB_NAKMY   (C8XAQ4), PSB_NATMM   (D3SSQ6), 
PSB_NATPD   (Q3IPX1), PSB_NOCFA   (Q5YUX2), PSB_NOCSJ   (A1SK13), 
PSB_PAEAT   (A1R6Q7), PSB_PSECP   (B8H8L6), PSB_RENSM   (A9WSI1), 
PSB_RHOE4   (C0ZZU7), PSB_RHOJR   (Q0SIF9), PSB_RHOOB   (C1ASP7), 
PSB_SACEN   (A4FBY1), PSB_SACVD   (C7MWV7), PSB_SALAI   (A8M2A3), 
PSB_SANKS   (D1BHT9), PSB_STANL   (D3Q557), PSB_STRCO   (Q7AKQ5), 
PSB_STRGG   (B1W306), PSB_STRRD   (D2ATV1), PSB_STRSW   (C9Z4D0), 
PSB_THEFY   (Q47NZ4), PSB_XYLCX   (D1BS26)
» more

UniProtKB/Swiss-Prot
False positive sequences		 11 sequences 

PSA3_SCHPO  (Q09682), PSA3_YEAST  (P23638), PSA4_BOVIN  (Q3ZCK9), 

PSA4_DICDI  (P34119), PSA4_DROME  (P18053), PSA4_HUMAN  (P25789), 
PSA4_MACFA  (Q4R932), PSA4_MOUSE  (Q9R1P0), PSA4_RAT(P21670), 
PSA4_SPIOL  (P52427), PSA4_YEAST  (P40303)
» more

PDB
[Detailed view]		 465 PDB

1FNT; 1G0U; 1G65; 1IRU; 1J2Q; 1JD2; 1PMA; 1RYP; 1YA7; 1YAR; 1YAU; 1Z7Q; 2F16; 2FAK; 2GPL; 2ZCY; 3BDM; 3C91; 3C92; 3D29; 3DY3; 3DY4; 3E47; 3GPJ; 3GPT; 3GPW; 3H4P; 3HYE; 3IPM; 3J9I; 3JCO; 3JCP; 3JRM; 3JSE; 3JTL; 3MG0; 3MG4; 3MG6; 3MG7; 3MG8; 3NZJ; 3NZW; 3NZX; 3OEU; 3OEV; 3OKJ; 3SDI; 3SDK; 3SHJ; 3TDD; 3UN4; 3UN8; 3UNB; 3UNE; 3UNF; 3UNH; 3WXR; 4CR2; 4CR3; 4CR4; 4EU2; 4FZC; 4FZG; 4G4S; 4GK7; 4HNP; 4HRC; 4HRD; 4INR; 4INT; 4INU; 4J70; 4JSQ; 4JSU; 4JT0; 4LQI; 4LTC; 4NNN; 4NNW; 4NO1; 4NO6; 4NO8; 4NO9; 4Q1S; 4QBY; 4QLQ; 4QLS; 4QLT; 4QLU; 4QLV; 4QUX; 4QUY; 4QV0; 4QV1; 4QV3; 4QV4; 4QV5; 4QV6; 4QV7; 4QV8; 4QV9; 4QVL; 4QVM; 4QVN; 4QVP; 4QVQ; 4QVV; 4QVW; 4QVY; 4QW0; 4QW1; 4QW3; 4QW4; 4QW5; 4QW6; 4QW7; 4QWF; 4QWG; 4QWI; 4QWJ; 4QWK; 4QWL; 4QWR; 4QWS; 4QWU; 4QWX; 4QXJ; 4QZ0; 4QZ1; 4QZ2; 4QZ3; 4QZ4; 4QZ5; 4QZ6; 4QZ7; 4QZW; 4QZX; 4QZZ; 4R00; 4R02; 4R17; 4R18; 4R3O; 4R67; 4RUR; 4V7O; 4X6Z; 4Y69; 4Y6A; 4Y6V; 4Y6Z; 4Y70; 4Y74; 4Y75; 4Y77; 4Y78; 4Y7W; 4Y7X; 4Y7Y; 4Y80; 4Y81; 4Y82; 4Y84; 4Y8G; 4Y8H; 4Y8I; 4Y8J; 4Y8K; 4Y8L; 4Y8M; 4Y8N; 4Y8O; 4Y8P; 4Y8Q; 4Y8R; 4Y8S; 4Y8T; 4Y8U; 4Y9Y; 4Y9Z; 4YA0; 4YA1; 4YA2; 4YA3; 4YA4; 4YA5; 4YA7; 4YA9; 4Z1L; 5A0Q; 5A5B; 5AHJ; 5BOU; 5BXL; 5BXN; 5CGF; 5CGG; 5CGH; 5CGI; 5CZ4; 5CZ5; 5CZ6; 5CZ7; 5CZ8; 5CZ9; 5CZA; 5D0S; 5D0T; 5D0V; 5D0W; 5D0X; 5D0Z; 5DKI; 5DKJ; 5FG7; 5FG9; 5FGA; 5FGD; 5FGE; 5FGF; 5FGG; 5FGH; 5FGI; 5FHS; 5GJQ; 5GJR; 5JHR; 5JHS; 5L4G; 5L52; 5L54; 5L55; 5L5A; 5L5B; 5L5D; 5L5E; 5L5F; 5L5H; 5L5I; 5L5J; 5L5O; 5L5P; 5L5Q; 5L5R; 5L5S; 5L5T; 5L5U; 5L5V; 5L5W; 5L5X; 5L5Y; 5L5Z; 5L60; 5L61; 5L62; 5L63; 5L64; 5L65; 5L66; 5L67; 5L68; 5L69; 5L6A; 5L6B; 5L6C; 5LAI; 5LAJ; 5LE5; 5LEX; 5LEY; 5LEZ; 5LF0; 5LF1; 5LF3; 5LF4; 5LF6; 5LF7; 5LN3; 5LTT; 5M2B; 5M32; 5MP9; 5MPA; 5MPB; 5MPC; 5NIF; 5T0C; 5T0G; 5T0H; 5T0I; 5T0J; 5VFO; 5VFP; 5VFQ; 5VFR; 5VFS; 5VFT; 5VFU; 5VY3; 5VY4; 5WVI; 5WVK; 6AVO; 6BDF; 6E5B; 6EF3; 6EPC; 6EPD; 6EPE; 6EPF; 6FVT; 6FVU; 6FVV; 6FVW; 6FVX; 6FVY; 6G7F; 6G8M; 6G8N; 6GOP; 6H39; 6HE5; 6HE7; 6HE8; 6HE9; 6HEA; 6HEC; 6HED; 6HTB; 6HTC; 6HTD; 6HTP; 6HTR; 6HUB; 6HUC; 6HUQ; 6HUU; 6HUV; 6HV3; 6HV4; 6HV5; 6HV7; 6HVA; 6HVR; 6HVS; 6HVT; 6HVU; 6HVV; 6HVW; 6HVX; 6HVY; 6HW0; 6HW3; 6HW4; 6HW5; 6HW6; 6HW7; 6HW8; 6HW9; 6HWA; 6HWB; 6HWC; 6HWD; 6HWE; 6HWF; 6J2C; 6J2N; 6J2Q; 6J2X; 6J30; 6KWY; 6MSB; 6MSD; 6MSE; 6MSG; 6MSH; 6MSJ; 6MSK; 6R70; 6REY; 6RGQ; 6TU3; 6UTF; 6UTG; 6UTH; 6UTI; 6UTJ; 6WJD; 6WJN; 6XMJ; 6ZOU; 6ZP6; 6ZP8; 7AWE; 7B12; 7DR6; 7DR7; 7DRW; 7LS5; 7LS6; 7LSX; 7LXV; 7NAN; 7NAO; 7NAP; 7NAQ; 7NHT; 7O2L; 7PG9; 7QO3; 7QO5; 7QO6; 7QVE; 7QXN; 7QXP; 7QXU; 7QXW; 7QXX; 7QY7; 7QYA; 7QYB; 7TEJ; 7TEO; 7V5G; 7V5M; 7W37; 7W38; 7W39; 7W3A; 7W3B; 7W3C; 7W3F; 7W3G; 7W3H; 7W3I; 7W3J; 7W3K; 7W3M; 8AZK; 8BW1; 8BZL; 8CVR; 8CVS; 8CVT; 8CXB; 8F66; 8F6A; 8F7K; 8FZ5; 8FZ6; 8OHZ; 8OI1; 8OLR; 8QYJ; 8QYL; 8QYM; 8QYN; 8QYO; 8QYS; 8QZ9; 8T08; 8T0M; 8U6Y; 8U7U; 8UD9
» more