PROSITE entry PS00858
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PURL: https://purl.expasy.org/prosite/signature/PS00858
Direct ScanProsite submission
General information about the entry
| Entry name [info] | PREPHENATE_DEHYDR_2 |
| Accession [info] | PS00858 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00671 |
Name and characterization of the entry
| Description [info] | Prephenate dehydratase signature 2. |
| Pattern [info] |
[LIVM]-[ST]-[KR]-[LIVMF]-E-[ST]-R-P. |
Numerical results [info]
| Total number of hits | 42 in 42 different sequences |
| Number of true positive hits | 40 in 40 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 2 in 2 different sequences |
| Number of false negative sequences | 8 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 95.24 % |
| Recall (true positives / (true positives + false negatives)) | 83.33 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
40 sequences
AROD1_ARATH (Q9SA96), AROD1_PETHY (D3U715), AROD2_ARATH (Q9SSE7), AROD2_PETHY (D3U716), AROD3_ARATH (Q9ZUY3), AROD3_PETHY (D3U717), AROD4_ARATH (O22241), AROD5_ARATH (Q9FNJ8), AROD6_ARATH (Q9SGD6), CMPDT_AQUAE (O67085), CMPDT_ECO57 (P0A9J9), CMPDT_ECOLI (P0A9J8), CMPDT_ENTAG (Q02286), CMPDT_HAEIN (P43900), CMPDT_NEIG1 (Q9ZHY3), CMPDT_PSEAE (Q9HZ67), CMPDT_SHIFL (P0A9K0), CMPDT_STUST (P27603), PHEA_BACSU (P21203), PHEA_CORGL (P10341), PHEA_LACLA (Q9CEU2), PHEA_LACLM (P43909), PHEA_METJA (Q58054), PHEA_MYCA1 (A0Q994), PHEA_MYCA9 (B1MEG8), PHEA_MYCBO (Q7TVJ6), PHEA_MYCBP (A1KQH3), PHEA_MYCLB (B8ZTU2), PHEA_MYCLE (Q9CDC4), PHEA_MYCMM (B2HMM5), PHEA_MYCPA (Q745J2), PHEA_MYCS2 (A0R643), PHEA_MYCSJ (A3Q7Q1), PHEA_MYCSK (A1UNA3), PHEA_MYCSS (Q1B1U6), PHEA_MYCTA (A5U9G7), PHEA_MYCTO (P9WIC2), PHEA_MYCTU (P9WIC3), PHEA_MYCUA (A0PX17), PHEA_MYCVP (A1TGX7)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
8 sequences
CMPDT_BUCAI (P57472), CMPDT_BUCAP (Q8K9F8), CMPDT_BUCBP (Q89AE5), GQQA_KOMEU (A0A0M0ELU2), PHA2_SCHPO (O14361), PHA2_YEAST (P32452), PHEA_AMYME (Q44104), PHEA_MYCGI (A4T6G3)» more |
| UniProtKB/Swiss-Prot False positive sequences |
2 sequences
DAAF1_AEDAE (Q16RY9), PH4H_DICDI (Q54XS1) |