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Entry: PS00868

General information about the entry

Entry name [info] CYS_MET_METAB_PP
Accession [info] PS00868
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00677

Name and characterization of the entry

Description [info] Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.
Pattern [info] 
[DQ]-[LIVMFY]-x(3)-[STAGCN]-[STAGCIL]-T-K-[FYWQI]-[LIVMF]-x-G-[HQD]-
[SGNH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 59 in 59 different sequences
Number of true positive hits 59 in 59 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 8
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 88.06 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 59 sequences 

ALGLR_THEMA (Q9X0Z7    ), CBL_NEUCR   (Q1K8G0    ), CBL_SCHPO   (O94350    ), 

CGL2_CAEEL  (P55216    ), CGL_HUMAN   (P32929    ), CGL_MACFA   (Q60HG7    ), 
CGL_MOUSE   (Q8VCN5    ), CGL_PIG     (Q19QT7    ), CGL_RAT     (P18757    ), 
CGS1_ARATH  (P55217    ), CGS2_ARATH  (Q9C876    ), CYS3_YEAST  (P31373    ), 
CYSA_STRCO  (Q59829    ), CYSD_EMENI  (P50125    ), CYSD_KLULA  (Q92441    ), 
CYSD_SCHPO  (O13326    ), CYSD_YEAST  (P06106    ), FUB7_FUSO4  (A0A0D2YG02), 
FUB7_GIBF5  (S0DUX5    ), FUB7_GIBM7  (W7MS09    ), LOLC1_EPIUN (Q8J0B2    ), 
LOLC2_EPIUN (Q5MNH8    ), MCCB_BACSU  (O05394    ), MEGL_FUSNN  (Q8RDT4    ), 
MEGL_PORGI  (Q7MX71    ), MEGL_PSEDM  (A0A0J6G7P5), MEGL_PSEPU  (P13254    ), 
MEGL_TREDE  (Q73KL7    ), MET7_SCHPO  (O74314    ), MET7_YEAST  (P47164    ), 
METB_ECOLI  (P00935    ), METB_HAEIN  (P44502    ), METB_HELPJ  (Q9ZMW7    ), 
METB_HELPX  (Q1M0P5    ), METB_HELPY  (P56069    ), METB_HERAU  (P24601    ), 
METB_MYCBO  (P66876    ), METB_MYCLE  (P46807    ), METB_MYCTO  (P9WGB6    ), 
METB_MYCTU  (P9WGB7    ), METC_ARATH  (P53780    ), METC_BACSU  (O31632    ), 
METC_BORAV  (Q07703    ), METC_COXBU  (Q83A83    ), METC_ECOLI  (P06721    ), 
METC_HAEIN  (P44527    ), METC_LACLA  (P0A4K2    ), METC_LACLC  (P0C2T9    ), 
METC_LACLM  (A2RM21    ), METC_SALTY  (P18949    ), METC_STAHJ  (Q4L332    ), 
METC_YEAST  (P43623    ), METI_BACSU  (O31631    ), METY_LEPME  (P94890    ), 
METY_THEMA  (Q9WZY4    ), METZ_PSEAE  (P55218    ), STR3_YEAST  (P53101    ), 
YFHE_SCHPO  (O42851    ), YHR2_YEAST  (P38716    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 8 sequences 

ALGLR_WOLPM (Q73GL9    ), BESB_STREN  (G8XHD7    ), MEGL_FUSNP  (Q8L0X4    ), 

MEGL_STRAW  (Q826W3    ), METC_RHIL3  (Q52811    ), METZ_MYCTO  (P9WGB4    ), 
METZ_MYCTU  (P9WGB5    ), MGL_ARATH   (Q9SGU9    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

METC_PAPLA  (P85217    )


				
	

	

		PDB
[Detailed view]		
		
			33 PDB
			


			1CL1; 1CL2; 1CS1; 1GC0; 1GC2; 1IBJ; 1N8P; 1PG8; 1UKJ; 2FQ6; 2GQN; 2NMP; 
			
				2O7C; 3COG; 3ELP; 3VK2; 3VK3; 3VK4; 4ITG; 4ITX; 4L0O; 5EIG; 5TSU; 5TT2; 
				5X2V; 5X2W; 5X2X; 5X2Y; 5X2Z; 5X30; 6NBA; 6OVG; 7BQW
			
			

			» more

				
	





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