Entry: PS00868

General information about the entry

Entry name [info] CYS_MET_METAB_PP
Accession [info] PS00868
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED; 01-DEC-2004 DATA UPDATE; 25-APR-2018 INFO UPDATE.
PROSITE Doc. [info] PDOC00677

Name and characterization of the entry

Description [info] Cys/Met metabolism enzymes pyridoxal-phosphate attachment site.
Pattern [info] 
[DQ]-[LIVMFY]-x(3)-[STAGCN]-[STAGCIL]-T-K-[FYWQI]-[LIVMF]-x-G-[HQD]-
[SGNH].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2018_04 which contains 557'275 sequence entries.


Total number of hits 52 in 52 different sequences
Number of true positive hits 52 in 52 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 6
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 89.66 %

Comments [info]

Taxonomic range [info] Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] pyridoxal_phosphate at position 6
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 52 sequences 

CBL_NEUCR   (Q1K8G0    ), CBL_SCHPO   (O94350    ), CGL2_CAEEL  (P55216    ), 

CGL_HUMAN   (P32929    ), CGL_MACFA   (Q60HG7    ), CGL_MOUSE   (Q8VCN5    ), 
CGL_PIG     (Q19QT7    ), CGL_RAT     (P18757    ), CGS1_ARATH  (P55217    ), 
CGS2_ARATH  (Q9C876    ), CYS3_YEAST  (P31373    ), CYSA_STRCO  (Q59829    ), 
CYSD_EMENI  (P50125    ), CYSD_KLULA  (Q92441    ), CYSD_SCHPO  (O13326    ), 
CYSD_YEAST  (P06106    ), FUB7_FUSO4  (A0A0D2YG02), FUB7_GIBF5  (S0DUX5    ), 
FUB7_GIBM7  (W7MS09    ), MCCB_BACSU  (O05394    ), MEGL_FUSNN  (Q8RDT4    ), 
MEGL_PORGI  (Q7MX71    ), MEGL_PSEPU  (P13254    ), MEGL_TREDE  (Q73KL7    ), 
MET7_SCHPO  (O74314    ), MET7_YEAST  (P47164    ), METB_ECOLI  (P00935    ), 
METB_HAEIN  (P44502    ), METB_HELPJ  (Q9ZMW7    ), METB_HELPX  (Q1M0P5    ), 
METB_HELPY  (P56069    ), METB_HERAU  (P24601    ), METB_MYCBO  (P66876    ), 
METB_MYCLE  (P46807    ), METB_MYCTO  (P9WGB6    ), METB_MYCTU  (P9WGB7    ), 
METC_ARATH  (P53780    ), METC_BACSU  (O31632    ), METC_BORAV  (Q07703    ), 
METC_COXBU  (Q83A83    ), METC_ECOLI  (P06721    ), METC_HAEIN  (P44527    ), 
METC_LACLA  (P0A4K2    ), METC_LACLC  (P0C2T9    ), METC_LACLM  (A2RM21    ), 
METC_SALTY  (P18949    ), METC_YEAST  (P43623    ), METI_BACSU  (O31631    ), 
METZ_PSEAE  (P55218    ), STR3_YEAST  (P53101    ), YFHE_SCHPO  (O42851    ), 
YHR2_YEAST  (P38716    )
» more

UniProtKB/Swiss-Prot
False negative sequences		 6 sequences 

MEGL_FUSNP  (Q8L0X4    ), MEGL_STRAW  (Q826W3    ), METC_RHIL3  (Q52811    ), 

METZ_MYCTO  (P9WGB4    ), METZ_MYCTU  (P9WGB5    ), MGL_ARATH   (Q9SGU9    )
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

METC_CRYLA  (P85217    )


				
	

	

		PDB
[Detailed view]		
		
			16 PDB
			


			1CL2; 1IBJ; 1N8P; 1PG8; 2FQ6; 2GQN; 2NMP; 3COG; 3ELP; 4ITX; 4L0O; 5TSU; 
			
				5X2W; 5X2X; 5X2Z; 5X30
			
			

			» more

				
	





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