PROSITE entry PS00870
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General information about the entry
Entry name [info] | CLPAB_1 |
Accession [info] | PS00870 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE; 03-MAY-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00679 |
Name and characterization of the entry
Description [info] | Chaperonins clpA/B signature 1. |
Pattern [info] |
[DA]-[AI]-[SGA]-[NQS]-[LIVMF](2)-K-[PT]-x-[LM]-x(2)-G. |
Numerical results [info]
Total number of hits | 197 in 197 different sequences |
Number of true positive hits | 197 in 197 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 14 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 93.36 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 2 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
197 sequences
CLPAA_SOLLC (P31541), CLPAB_SOLLC (P31542), CLPA_BRANA (P46523), CLPA_ECO57 (P0ABI1), CLPA_ECOL6 (P0ABI0), CLPA_ECOLI (P0ABH9), CLPA_FUSBL (P05444), CLPB1_ARATH (P42730), CLPB1_NOSS1 (Q8YUL9), CLPB1_ORYSJ (Q6F2Y7), CLPB1_PARMW (Q7U637), CLPB1_STRAW (Q82EU9), CLPB1_SYNE7 (P53533), CLPB1_SYNY3 (P74459), CLPB1_THEVB (Q8DJ40), CLPB2_CHLTE (Q8KA87), CLPB2_NOSS1 (Q8YM56), CLPB2_ORYSJ (Q75GT3), CLPB2_PARMW (Q7U3T3), CLPB2_STRAW (Q826F2), CLPB2_SYNE7 (O34209), CLPB2_SYNY3 (P74361), CLPB2_THEVB (Q8DG71), CLPB3_ARATH (Q9LF37), CLPB3_ORYSJ (Q0E3C8), CLPB4_ARATH (Q8VYJ7), CLPB_AGRFC (Q7CU92), CLPB_AQUAE (O67588), CLPB_BACAN (Q81TT4), CLPB_BACC1 (Q73BY1), CLPB_BACCR (Q81GM5), CLPB_BACTN (Q89YY3), CLPB_BDEBA (Q6MIV0), CLPB_BIFLO (Q8G4X4), CLPB_BLOFL (Q7VQF3), CLPB_BORBR (Q7WHB6), CLPB_BORPA (Q7W9E6), CLPB_BORPE (Q7VYV6), CLPB_BRADU (Q89UL2), CLPB_BRUME (Q8YJ91), CLPB_BRUSU (Q7CEG6), CLPB_CAMJE (Q9PI02), CLPB_CAUVC (Q9A9T4), CLPB_CHLCV (Q822Q4), CLPB_CHLMU (Q9PKS5), CLPB_CHLPN (Q7AJA9), CLPB_CHLTR (O84115), CLPB_CHRVO (Q7NWN7), CLPB_CLOAB (Q97KG0), CLPB_CLOPE (Q8XKG8), CLPB_CLOTE (Q898C7), CLPB_CORDI (Q6NF05), CLPB_COREF (Q8FM94), CLPB_CORGL (P53532), CLPB_COXBU (Q83F55), CLPB_DEIRA (Q9RVI3), CLPB_DESVH (Q72AW6), CLPB_DICNO (P17422), CLPB_ECO57 (P63285), CLPB_ECOL6 (P63286), CLPB_ECOLI (P63284), CLPB_ENTFA (Q831Y7), CLPB_FUSNN (Q8RHQ8), CLPB_GEOSL (Q74FF1), CLPB_GLOVI (Q7NFE9), CLPB_HAEDU (Q7VNH1), CLPB_HAEIN (P44403), CLPB_HELHP (Q7VJY3), CLPB_HELPJ (Q9ZMH1), CLPB_HELPY (P71404), CLPB_LACLA (Q9CFF3), CLPB_LACLM (O68185), CLPB_LACPL (Q88VX7), CLPB_LEPBY (O87444), CLPB_LEPIC (Q72QU2), CLPB_LEPIN (Q8F509), CLPB_LISIN (Q929G7), CLPB_LISM4 (G2K265), CLPB_LISMF (Q71XF9), CLPB_LISMO (Q8Y570), CLPB_MALP2 (Q8EW28), CLPB_MEIRU (Q7X2S8), CLPB_MYCBO (P63287), CLPB_MYCGA (Q7NAZ3), CLPB_MYCGE (P47597), CLPB_MYCLE (Q9CB26), CLPB_MYCPA (Q73T66), CLPB_MYCPN (P75247), CLPB_MYCTO (P9WPD0), CLPB_MYCTU (P9WPD1), CLPB_NEIMA (Q9JTP9), CLPB_NEIMB (Q9JYQ8), CLPB_NITEU (Q82SD8), CLPB_OCEIH (Q8EU05), CLPB_PARUW (Q6MD97), CLPB_PASMU (Q9CKC0), CLPB_PHOLL (Q7N788), CLPB_PHOPR (Q6LMY0), CLPB_PORGI (Q7MVE7), CLPB_PROFC (Q7WSY8), CLPB_PROMA (Q7VBL0), CLPB_PROMM (Q7V8B1), CLPB_PROMP (Q7V2A3), CLPB_PSEAE (Q9HVN5), CLPB_PSEPK (Q88Q71), CLPB_PSESM (Q889C2), CLPB_RALSO (Q8XZR0), CLPB_RHILO (Q98G96), CLPB_RHIME (Q92MK7), CLPB_RHOBA (Q7UM33), CLPB_RHOPA (Q6N1H2), CLPB_RICBR (Q1RGR1), CLPB_RICCN (Q92JK8), CLPB_RICFE (Q4UN57), CLPB_RICPR (Q9ZEA9), CLPB_RICTY (Q68XR2), CLPB_SALTI (Q7AMH5), CLPB_SALTY (Q7CQ01), CLPB_SHEON (Q8EBE6), CLPB_SHIFL (Q7UBW5), CLPB_STAAC (Q5HHB0), CLPB_STAAM (Q99VB5), CLPB_STAAN (Q7A6G6), CLPB_STAAR (Q6GIB2), CLPB_STAAS (Q6GAV1), CLPB_STAAW (Q8NXE7), CLPB_STAEQ (Q5HQI5), CLPB_STAES (Q8CPT5), CLPB_STRAL (Q9Z6E4), CLPB_STRCO (Q8CJV9), CLPB_STRMU (Q8DTC7), CLPB_THET2 (Q72IK9), CLPB_THET8 (Q9RA63), CLPB_TREDE (Q73K92), CLPB_TREPA (O83110), CLPB_TROW8 (Q83N78), CLPB_TROWT (Q83FI1), CLPB_VIBCH (Q9KU18), CLPB_VIBPA (Q87S63), CLPB_VIBVU (Q8DEV2), CLPB_VIBVY (Q7MNK1), CLPB_WOLPM (Q73IE4), CLPB_WOLSU (Q7M9X4), CLPB_XANAC (Q8PHQ4), CLPB_XANCP (Q8P6A0), CLPB_XYLFA (Q9PGC1), CLPB_XYLFT (Q87AX8), CLPB_YEREN (Q9F746), CLPB_YERPE (Q74X11), CLPC1_ARATH (Q9FI56), CLPC1_MYCS2 (A0R574), CLPC1_MYCTO (P9WPC8), CLPC1_MYCTU (P9WPC9), CLPC1_ORYSJ (Q7F9I1), CLPC2_ARATH (Q9SXJ7), CLPC2_ORYSJ (Q2QVG9), CLPC3_ORYSJ (Q53LY0), CLPC4_ORYSJ (Q53N47), CLPC_BACSU (P37571), CLPC_CHLPN (Q9Z8A6), CLPC_CYACA (Q9TM05), CLPC_GUITH (O78410), CLPC_MYCBO (P0A523), CLPC_MYCLE (P24428), CLPC_NEOYE (Q1XDF4), CLPC_PEA(P35100), CLPC_PORPU (P51332), CLPC_STAA3 (Q2FJB5), CLPC_STAA8 (Q2G0P5), CLPC_STAAB (Q2YSD6), CLPC_STAAC (P0C281), CLPC_STAAM (Q99W78), CLPC_STAAN (Q7A797), CLPC_STAAR (Q6GJE4), CLPC_STAAS (Q6GBW3), CLPC_STAAW (Q8NXY8), CLPC_STAEQ (Q5HRM8), CLPC_STAES (Q8CQ88), CLPC_STAHJ (Q4L3I4), CLPC_STAS1 (Q49V34), CLPC_TRICV (P49574), CLPD1_ORYSJ (Q6H795), CLPD2_ORYSJ (Q7XL03), CLPD_ARATH (P42762), CLPE_BACSU (O31673), CLPE_LACLA (Q9CI09), CLPE_LACLM (Q9S5Z2), CLPE_STRPN (P35594), CLPV1_PSEAE (Q9I742), CLP_TRYBB (P31543), HLYB_BRAHO (Q54316), HS104_SCHPO (O94641), HS104_YEAST (P31539), HSP78_CANAL (Q96UX5), HSP78_SCHPO (O74402), HSP78_YEAST (P33416), HSP98_NEUCR (P31540)» more
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UniProtKB/Swiss-Prot False negative sequences |
14 sequences
ADPR_RHOER (Q01357), CLPB1_CHLTE (Q8KG79), CLPB2_ARATH (F4JVJ1), CLPC_STRP6 (Q5XCL7), CLPL_LACLL (Q06716), CLPL_STAA3 (Q2FDV8), CLPL_STAA8 (Q2FV74), CLPL_STAAB (Q2YWB1), CLPL_STAAC (Q5HD02), CLPL_STAAM (Q99R88), CLPL_STAAN (Q7A3F4), CLPL_STAAR (Q6GDQ0), CLPL_STAAS (Q6G6C6), CLPL_STAAW (Q8NUR7)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
CLPA_PINPS (P81671), CLPA_POPEU (P84565), CLPB_ACICA (P82956), CLP_TRYCR (O15885)» more |
PDB [Detailed view] |
60 PDB
1JBK; 1KSF; 1QVR; 1R6B; 3J3R; 3J3S; 3J3T; 3J3U; 3PXG; 3PXI; 4CIU; 4D2Q; 4D2U; 4D2X; 4HSE; 5KNE; 5OFO; 5OG1; 5VJH; 5VY8; 5VY9; 5VYA; 5WBW; 6AHF; 6AMN; 6DJU; 6DJV; 6ED3; 6EM8; 6EM9; 6EMW; 6N8T; 6N8V; 6N8Z; 6OAX; 6OAY; 6OG1; 6OG2; 6OG3; 6QS6; 6QS7; 6QS8; 6UQE; 6UQO; 6W1Z; 6W20; 6W21; 6W22; 6W23; 6W24; 6W6E; 6W6G; 6W6H; 6W6I; 6W6J; 7ABR; 7L6N; 8A8U; 8A8V; 8A8W » more |