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Entry: PS00871 |
Entry name [info] | CLPAB_2 |
Accession [info] | PS00871 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00679 |
Description [info] | Chaperonins clpA/B signature 2. |
Pattern [info] |
[RGT]-[LIVMFY]-[DN]-x-[ST]-E-[LIVMFY]-x-[ED]-[KRQEAS]-x-[STA]-x-[STAD]- [KRS]-[LIVM]-x-G-[STAP]. |
Total number of hits | 192 in 192 different sequences |
Number of true positive hits | 191 in 191 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 1 |
Number of false negative sequences | 13 |
Number of 'partial' sequences | 4 |
Precision (true positives / (true positives + false positives)) | 99.48 % |
Recall (true positives / (true positives + false negatives)) | 93.63 % |
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
191 sequences
CLPAA_SOLLC (P31541 ), CLPAB_SOLLC (P31542 ), CLPA_BRANA (P46523 ), CLPA_ECO57 (P0ABI1 ), CLPA_ECOL6 (P0ABI0 ), CLPA_ECOLI (P0ABH9 ), CLPA_FUSBL (P05444 ), CLPB1_ARATH (P42730 ), CLPB1_CHLTE (Q8KG79 ), CLPB1_NOSS1 (Q8YUL9 ), CLPB1_ORYSJ (Q6F2Y7 ), CLPB1_PARMW (Q7U637 ), CLPB1_STRAW (Q82EU9 ), CLPB1_SYNE7 (P53533 ), CLPB1_SYNY3 (P74459 ), CLPB1_THEVB (Q8DJ40 ), CLPB2_NOSS1 (Q8YM56 ), CLPB2_ORYSJ (Q75GT3 ), CLPB2_PARMW (Q7U3T3 ), CLPB2_STRAW (Q826F2 ), CLPB2_SYNE7 (O34209 ), CLPB2_SYNY3 (P74361 ), CLPB2_THEVB (Q8DG71 ), CLPB3_ARATH (Q9LF37 ), CLPB4_ARATH (Q8VYJ7 ), CLPB_AGRFC (Q7CU92 ), CLPB_AQUAE (O67588 ), CLPB_BACAN (Q81TT4 ), CLPB_BACC1 (Q73BY1 ), CLPB_BACCR (Q81GM5 ), CLPB_BACTN (Q89YY3 ), CLPB_BDEBA (Q6MIV0 ), CLPB_BIFLO (Q8G4X4 ), CLPB_BLOFL (Q7VQF3 ), CLPB_BORBR (Q7WHB6 ), CLPB_BORPA (Q7W9E6 ), CLPB_BORPE (Q7VYV6 ), CLPB_BRADU (Q89UL2 ), CLPB_BRUME (Q8YJ91 ), CLPB_BRUSU (Q7CEG6 ), CLPB_CAMJE (Q9PI02 ), CLPB_CAUVC (Q9A9T4 ), CLPB_CHLCV (Q822Q4 ), CLPB_CHLMU (Q9PKS5 ), CLPB_CHLPN (Q7AJA9 ), CLPB_CHLTR (O84115 ), CLPB_CHRVO (Q7NWN7 ), CLPB_CLOAB (Q97KG0 ), CLPB_CLOPE (Q8XKG8 ), CLPB_CLOTE (Q898C7 ), CLPB_CORDI (Q6NF05 ), CLPB_COREF (Q8FM94 ), CLPB_CORGL (P53532 ), CLPB_COXBU (Q83F55 ), CLPB_DEIRA (Q9RVI3 ), CLPB_DESVH (Q72AW6 ), CLPB_DICNO (P17422 ), CLPB_ECO57 (P63285 ), CLPB_ECOL6 (P63286 ), CLPB_ECOLI (P63284 ), CLPB_ENTFA (Q831Y7 ), CLPB_FUSNN (Q8RHQ8 ), CLPB_GEOSL (Q74FF1 ), CLPB_GLOVI (Q7NFE9 ), CLPB_HAEDU (Q7VNH1 ), CLPB_HAEIN (P44403 ), CLPB_HELHP (Q7VJY3 ), CLPB_HELPJ (Q9ZMH1 ), CLPB_HELPY (P71404 ), CLPB_LACLA (Q9CFF3 ), CLPB_LACLM (O68185 ), CLPB_LACPL (Q88VX7 ), CLPB_LEPBY (O87444 ), CLPB_LEPIC (Q72QU2 ), CLPB_LEPIN (Q8F509 ), CLPB_LISIN (Q929G7 ), CLPB_LISM4 (G2K265 ), CLPB_LISMF (Q71XF9 ), CLPB_LISMO (Q8Y570 ), CLPB_MALP2 (Q8EW28 ), CLPB_MEIRU (Q7X2S8 ), CLPB_MYCBO (P63287 ), CLPB_MYCGA (Q7NAZ3 ), CLPB_MYCGE (P47597 ), CLPB_MYCLE (Q9CB26 ), CLPB_MYCPA (Q73T66 ), CLPB_MYCPN (P75247 ), CLPB_MYCTO (P9WPD0 ), CLPB_MYCTU (P9WPD1 ), CLPB_NEIMA (Q9JTP9 ), CLPB_NEIMB (Q9JYQ8 ), CLPB_NITEU (Q82SD8 ), CLPB_OCEIH (Q8EU05 ), CLPB_PARUW (Q6MD97 ), CLPB_PASMU (Q9CKC0 ), CLPB_PHOLL (Q7N788 ), CLPB_PHOPR (Q6LMY0 ), CLPB_PORGI (Q7MVE7 ), CLPB_PROFC (Q7WSY8 ), CLPB_PROMA (Q7VBL0 ), CLPB_PROMM (Q7V8B1 ), CLPB_PROMP (Q7V2A3 ), CLPB_PSEAE (Q9HVN5 ), CLPB_PSEPK (Q88Q71 ), CLPB_PSESM (Q889C2 ), CLPB_RALSO (Q8XZR0 ), CLPB_RHILO (Q98G96 ), CLPB_RHIME (Q92MK7 ), CLPB_RHOBA (Q7UM33 ), CLPB_RHOPA (Q6N1H2 ), CLPB_RICBR (Q1RGR1 ), CLPB_RICCN (Q92JK8 ), CLPB_RICFE (Q4UN57 ), CLPB_RICPR (Q9ZEA9 ), CLPB_RICTY (Q68XR2 ), CLPB_SALTI (Q7AMH5 ), CLPB_SALTY (Q7CQ01 ), CLPB_SHEON (Q8EBE6 ), CLPB_SHIFL (Q7UBW5 ), CLPB_STAAC (Q5HHB0 ), CLPB_STAAM (Q99VB5 ), CLPB_STAAN (Q7A6G6 ), CLPB_STAAR (Q6GIB2 ), CLPB_STAAS (Q6GAV1 ), CLPB_STAAW (Q8NXE7 ), CLPB_STAEQ (Q5HQI5 ), CLPB_STAES (Q8CPT5 ), CLPB_STRAL (Q9Z6E4 ), CLPB_STRCO (Q8CJV9 ), CLPB_STRMU (Q8DTC7 ), CLPB_THET2 (Q72IK9 ), CLPB_THET8 (Q9RA63 ), CLPB_TREDE (Q73K92 ), CLPB_TREPA (O83110 ), CLPB_TROW8 (Q83N78 ), CLPB_TROWT (Q83FI1 ), CLPB_VIBCH (Q9KU18 ), CLPB_VIBPA (Q87S63 ), CLPB_VIBVU (Q8DEV2 ), CLPB_VIBVY (Q7MNK1 ), CLPB_WOLPM (Q73IE4 ), CLPB_WOLSU (Q7M9X4 ), CLPB_XANAC (Q8PHQ4 ), CLPB_XANCP (Q8P6A0 ), CLPB_XYLFA (Q9PGC1 ), CLPB_XYLFT (Q87AX8 ), CLPB_YEREN (Q9F746 ), CLPB_YERPE (Q74X11 ), CLPC1_ARATH (Q9FI56 ), CLPC1_ORYSJ (Q7F9I1 ), CLPC2_ARATH (Q9SXJ7 ), CLPC2_ORYSJ (Q2QVG9 ), CLPC3_ORYSJ (Q53LY0 ), CLPC4_ORYSJ (Q53N47 ), CLPC_BACSU (P37571 ), CLPC_CYACA (Q9TM05 ), CLPC_GUITH (O78410 ), CLPC_NEOYE (Q1XDF4 ), CLPC_PEA (P35100 ), CLPC_PORPU (P51332 ), CLPC_STAA3 (Q2FJB5 ), CLPC_STAA8 (Q2G0P5 ), CLPC_STAAB (Q2YSD6 ), CLPC_STAAC (P0C281 ), CLPC_STAAM (Q99W78 ), CLPC_STAAN (Q7A797 ), CLPC_STAAR (Q6GJE4 ), CLPC_STAAS (Q6GBW3 ), CLPC_STAAW (Q8NXY8 ), CLPC_STAEQ (Q5HRM8 ), CLPC_STAES (Q8CQ88 ), CLPC_STAHJ (Q4L3I4 ), CLPC_STAS1 (Q49V34 ), CLPC_STRP6 (Q5XCL7 ), CLPC_TRICV (P49574 ), CLPD1_ORYSJ (Q6H795 ), CLPD2_ORYSJ (Q7XL03 ), CLPD_ARATH (P42762 ), CLPE_BACSU (O31673 ), CLPE_LACLA (Q9CI09 ), CLPE_LACLM (Q9S5Z2 ), CLPE_STRPN (P35594 ), CLPL_LACLL (Q06716 ), CLP_TRYBB (P31543 ), HLYB_BRAHO (Q54316 ), HS104_SCHPO (O94641 ), HS104_YEAST (P31539 ), HSP78_CANAL (Q96UX5 ), HSP78_SCHPO (O74402 ), HSP78_YEAST (P33416 ), HSP98_NEUCR (P31540 )» more
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UniProtKB/Swiss-Prot False negative sequences |
13 sequences
ADPR_RHOER (Q01357 ), CLPB2_ARATH (F4JVJ1 ), CLPB2_CHLTE (Q8KA87 ), CLPL_STAA3 (Q2FDV8 ), CLPL_STAA8 (Q2FV74 ), CLPL_STAAB (Q2YWB1 ), CLPL_STAAC (Q5HD02 ), CLPL_STAAM (Q99R88 ), CLPL_STAAN (Q7A3F4 ), CLPL_STAAR (Q6GDQ0 ), CLPL_STAAS (Q6G6C6 ), CLPL_STAAW (Q8NUR7 ), CLPV1_PSEAE (Q9I742 )» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
4 sequences
CLPA_PINPS (P81671 ), CLPA_POPEU (P84565 ), CLPB_ACICA (P82956 ), CLP_TRYCR (O15885 )» more |
UniProtKB/Swiss-Prot False positive sequences |
1 sequence
CLPB3_ORYSJ (Q0E3C8 ) |
PDB [Detailed view] |
59 PDB
1KSF; 1QVR; 1R6B; 3J3R; 3J3S; 3J3T; 3J3U; 4CIU; 4D2Q; 4D2U; 4D2X; 4FCT; 4FCV; 4FCW; 4FD2; 4LJ4; 4LJ5; 4LJ6; 4LJ7; 5KNE; 5OFO; 5OG1; 5VJH; 5VY8; 5VY9; 5VYA; 6AHF; 6DJU; 6DJV; 6ED3; 6EM8; 6EM9; 6EMW; 6N8T; 6N8V; 6N8Z; 6OAX; 6OAY; 6OG1; 6OG2; 6OG3; 6QS6; 6QS7; 6QS8; 6UQE; 6UQO; 6W1Z; 6W20; 6W21; 6W22; 6W23; 6W24; 6W6E; 6W6G; 6W6H; 6W6I; 6W6J; 7ABR; 7L6N » more |