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PROSITE entry PS00872


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PURL: https://purl.expasy.org/prosite/signature/PS00872

Direct ScanProsite submission
General information about the entry

Entry name [info] NA_GALACTOSIDE_SYMP
Accession [info] PS00872
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00680

Name and characterization of the entry

Description [info] Sodium:galactoside symporter family signature.
Pattern [info] 
[DG]-x(3)-G-x(3)-[DN]-x(6,8)-[GA]-[KRHQ]-[FSAR]-[KRL]-[PT]-[FYW]-
[LIVMWQ]-[LIV]-x(0,1)-[GAFV]-[GSTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 23 sequences 

GUTA_BACSU  (O34368), LACP_STAXY  (O33814), LACY_LACDA  (P22733), 

LACY_LACHE  (Q7WTB2), LACY_LEULA  (Q48624), LACY_STRTR  (P23936), 
MELB_ECOLI  (P02921), MELB_KLEAE  (O07366), MELB_KLEPN  (Q02581), 
MELB_SALTY  (P30878), RAFP_PEDPE  (P43466), UIDB2_ECOLI (P0CE45), 
UIDB_ECOLI  (P0CE44), XYLP_LACPE  (P96792), Y1374_SYNY3 (P74168), 
YAGG_ECOLI  (P75683), YICJ_ECOLI  (P31435), YIHO_ECOLI  (P32136), 
YIHO_SALTY  (Q9L7R4), YIHP_ECOLI  (P32137), YIHP_SALTY  (Q9L7R5), 
YJMB_BACSU  (O34961), YNAJ_BACSU  (P94488)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

YCR3_PSEVU  (Q01334)


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			pdb_00004m64; pdb_00008fq9; pdb_00008t60