PROSITE logo

PROSITE entry PS00872


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] NA_GALACTOSIDE_SYMP
Accession [info] PS00872
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00680

Name and characterization of the entry

Description [info] Sodium:galactoside symporter family signature.
Pattern [info]
[DG]-x(3)-G-x(3)-[DN]-x(6,8)-[GA]-[KRHQ]-[FSAR]-[KRL]-[PT]-[FYW]-
[LIVMWQ]-[LIV]-x(0,1)-[GAFV]-[GSTA].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 23 in 23 different sequences
Number of true positive hits 23 in 23 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 95.83 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
23 sequences

GUTA_BACSU  (O34368), LACP_STAXY  (O33814), LACY_LACDA  (P22733), 
LACY_LACHE  (Q7WTB2), LACY_LEULA  (Q48624), LACY_STRTR  (P23936), 
MELB_ECOLI  (P02921), MELB_KLEAE  (O07366), MELB_KLEPN  (Q02581), 
MELB_SALTY  (P30878), RAFP_PEDPE  (P43466), UIDB2_ECOLI (P0CE45), 
UIDB_ECOLI  (P0CE44), XYLP_LACPE  (P96792), Y1374_SYNY3 (P74168), 
YAGG_ECOLI  (P75683), YICJ_ECOLI  (P31435), YIHO_ECOLI  (P32136), 
YIHO_SALTY  (Q9L7R4), YIHP_ECOLI  (P32137), YIHP_SALTY  (Q9L7R5), 
YJMB_BACSU  (O34961), YNAJ_BACSU  (P94488)
» more

UniProtKB/Swiss-Prot
False negative sequences
1 sequence

YCR3_PSEVU  (Q01334)

		
PDB
[Detailed view]
1 PDB

4M64