PROSITE entry PS00872
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | NA_GALACTOSIDE_SYMP |
Accession [info] | PS00872 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-DEC-2004 DATA UPDATE; 27-MAR-2024 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00680 |
Name and characterization of the entry
Description [info] | Sodium:galactoside symporter family signature. |
Pattern [info] |
[DG]-x(3)-G-x(3)-[DN]-x(6,8)-[GA]-[KRHQ]-[FSAR]-[KRL]-[PT]-[FYW]- [LIVMWQ]-[LIV]-x(0,1)-[GAFV]-[GSTA]. |
Numerical results [info]
Total number of hits | 23 in 23 different sequences |
Number of true positive hits | 23 in 23 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 1 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 95.83 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
23 sequences
GUTA_BACSU (O34368), LACP_STAXY (O33814), LACY_LACDA (P22733), LACY_LACHE (Q7WTB2), LACY_LEULA (Q48624), LACY_STRTR (P23936), MELB_ECOLI (P02921), MELB_KLEAE (O07366), MELB_KLEPN (Q02581), MELB_SALTY (P30878), RAFP_PEDPE (P43466), UIDB2_ECOLI (P0CE45), UIDB_ECOLI (P0CE44), XYLP_LACPE (P96792), Y1374_SYNY3 (P74168), YAGG_ECOLI (P75683), YICJ_ECOLI (P31435), YIHO_ECOLI (P32136), YIHO_SALTY (Q9L7R4), YIHP_ECOLI (P32137), YIHP_SALTY (Q9L7R5), YJMB_BACSU (O34961), YNAJ_BACSU (P94488)» more
|
UniProtKB/Swiss-Prot False negative sequences |
1 sequence
YCR3_PSEVU (Q01334) |
PDB [Detailed view] |
1 PDB
4M64 |