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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00879


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PURL: https://purl.expasy.org/prosite/signature/PS00879

Direct ScanProsite submission
General information about the entry

Entry name [info] ODR_DC_2_2
Accession [info] PS00879
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00685

Name and characterization of the entry

Description [info] Orn/DAP/Arg decarboxylases family 2 signature 2.
Pattern [info] 
[GSA]-x(2,6)-[LIVMSCP]-x-{N}-[LIVMF]-[DNS]-[LIVMCA]-G-G-G-[LIVMFY]-
[GSTPCEQ].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 198 in 196 different sequences
Number of true positive hits 154 in 154 different sequences
Number of 'unknown' hits 0
Number of false positive hits 44 in 42 different sequences
Number of false negative sequences 42
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 77.78 %
Recall (true positives / (true positives + false negatives)) 78.57 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 3
Version [info] 2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 154 sequences 

ADC1A_TOBAC (A0A1S3YCW2), ADC1B_TOBAC (A0A1S3WYR7), ADC2_ORYSJ  (Q7XRA1), 

AZIN1_HUMAN (O14977), AZIN1_MOUSE (O35484), AZIN1_PONAB (Q5R7K3), 
AZIN1_RAT   (Q63764), AZIN2_HUMAN (Q96A70), AZIN2_MOUSE (Q8BVM4), 
AZIN2_RAT   (D4A693), AZIN2_XENLA (Q9I8S4), BTRK_NIACI  (Q2L4H3), 
COMT1_SACOF (O82054), DCDA1_ARATH (Q949X7), DCDA2_ARATH (Q94A94), 
DCDA_AQUAE  (O67262), DCDA_ARCFU  (O29458), DCDA_BACMT  (P41023), 
DCDA_BACSU  (P23630), DCDA_BACTN  (Q8A800), DCDA_BUCAI  (P57513), 
DCDA_BUCAP  (Q8K9C4), DCDA_CAMJE  (Q9PII5), DCDA_COREF  (Q8RQM6), 
DCDA_CORGL  (P09890), DCDA_ECOLI  (P00861), DCDA_ECOLW  (E0IWI3), 
DCDA_HAEIN  (P44316), DCDA_HALH5  (Q9KCM5), DCDA_HELPJ  (Q9ZME5), 
DCDA_HELPY  (P56129), DCDA_METJA  (Q58497), DCDA_MYCBO  (P0A5M5), 
DCDA_MYCS2  (Q9X5M1), DCDA_MYCTO  (P9WIU6), DCDA_MYCTU  (P9WIU7), 
DCDA_NEIMA  (Q9JWA6), DCDA_NEIMB  (Q9JXM2), DCDA_ORYSJ  (Q6ZG77), 
DCDA_PSEAE  (P19572), DCDA_PSEFL  (O05321), DCDA_STAAC  (Q5HG20), 
DCDA_STRCO  (Q9ZBH5), DCDA_SYNY3  (Q55484), DCDA_VIBCH  (Q9KVL7), 
DCLO_SELRU  (O50657), DCOR1_DROME (P40807), DCOR1_XENLA (P27120), 
DCOR2_DROME (P40808), DCOR_BOVIN  (P27117), DCOR_CAEEL  (P41931), 
DCOR_CANAL  (P78599), DCOR_CAPAN  (Q8S3N2), DCOR_CHICK  (P27118), 
DCOR_CRIGR  (P14019), DCOR_DATST  (P50134), DCOR_DICDI  (Q54UF3), 
DCOR_HUMAN  (P11926), DCOR_LEIDO  (P27116), DCOR_MOUSE  (P00860), 
DCOR_MUSPA  (P27119), DCOR_NEUCR  (P27121), DCOR_PANRE  (P49725), 
DCOR_PARBR  (Q92445), DCOR_RAT(P09057), DCOR_SOLLC  (O22616), 
DCOR_TRYBB  (P07805), DCOR_YEAST  (P08432), FLVG_ASPFN  (B8NHE2), 
LOLD1_EPIUN (Q5MNI5), LOLD2_EPIUN (Q5MNH7), NSPC_HERAR  (Q5QCP2), 
ODC1A_TOBAC (A0A1S4AUX8), ODC1B_TOBAC (P93351), ODC_NICGL   (E0WN94), 
ODC_NICGU   (Q9FPK5), SBNH_STAA8  (Q2G1M6), SPE1_ARATH  (Q9SI64), 
SPE1_AVESA  (P22220), SPE1_BRAJU  (O82475), SPE1_DIACA  (Q96412), 
SPE1_ORYSJ  (Q9SNN0), SPE1_PEA(Q43075), SPE1_SOLLC  (P49726), 
SPE1_SOYBN  (Q39827), SPE2_ARATH  (O23141), SPEA1_SYNY3 (P74576), 
SPEA_AERHH  (A0KIP8), SPEA_AERS4  (A4SPD6), SPEA_ALKEH  (Q0ACK8), 
SPEA_BACFN  (Q5LIQ3), SPEA_BACFR  (Q64ZT8), SPEA_BACTN  (Q8A2B1), 
SPEA_CHRVO  (Q7NU27), SPEA_CITBB  (B5EIW4), SPEA_DEIRA  (Q9RXR4), 
SPEA_ECO57  (Q8XCX9), SPEA_ECO5E  (B5YQD6), SPEA_ECOL6  (Q8FE34), 
SPEA_ECOLI  (P21170), SPEA_ECOSM  (B1LDE8), SPEA_GEODF  (B9M6H6), 
SPEA_GEOMG  (Q39X78), SPEA_GEOSL  (A0A4W3), SPEA_GEOSM  (C6E3V4), 
SPEA_GEOUR  (A5GB52), SPEA_HAMD5  (C4K6F4), SPEA_KLEP3  (B5XUB1), 
SPEA_MARN8  (A1TY02), SPEA_NEIMA  (Q9JT25), SPEA_NEIMB  (Q9K0U3), 
SPEA_NOSS1  (Q8YRP3), SPEA_PARMW  (Q7U3S0), SPEA_PASMU  (Q9CL60), 
SPEA_PELPD  (A1AS90), SPEA_PHOLL  (Q7N121), SPEA_PHOV8  (A6L012), 
SPEA_PROM0  (A3PA96), SPEA_PROM2  (A8G243), SPEA_PROM3  (A2CDK1), 
SPEA_PROM5  (A2BU00), SPEA_PROM9  (Q31DD8), SPEA_PROMA  (Q7VEG4), 
SPEA_PROMH  (B4F1A4), SPEA_PROMM  (Q7TUJ9), SPEA_PROMP  (Q7V3M9), 
SPEA_PROMS  (A2BNH3), SPEA_PSEAE  (Q9HUX1), SPEA_PSEPK  (Q88QC7), 
SPEA_PSESM  (Q87VU3), SPEA_RHOBA  (Q7UTS2), SPEA_SALA4  (B5F5L1), 
SPEA_SALCH  (Q57K30), SPEA_SALDC  (B5FUJ7), SPEA_SALHS  (B4THH1), 
SPEA_SALNS  (B4T5J3), SPEA_SALPB  (A9N4N1), SPEA_SALSV  (B4TV55), 
SPEA_SALTI  (P60658), SPEA_SALTY  (P60659), SPEA_SHIF8  (Q0T0V3), 
SPEA_SHIFL  (Q83Q93), SPEA_SYNR3  (A5GWM2), SPEA_THEVB  (Q8DHY6), 
SPEA_TOLAT  (C4L9A9), SPEA_TRIL1  (B3EAF3), SPEA_XANAC  (Q8PFQ5), 
SPEA_XANCP  (Q8P448), SPEA_XYLF2  (B2I6M1), SPEA_XYLFA  (Q9PH02), 
SPEA_XYLFM  (B0U1H6), SPEA_XYLFT  (Q87F25), SPEA_YERPE  (Q8ZHG8), 
TABA_PSEAJ  (P31851)
» more

UniProtKB/Swiss-Prot
False negative sequences		 42 sequences 

CAPDC_SYNY3 (P73562), DCDA_ACTPA  (O69203), DCDA_BUCBP  (Q89AC6), 

DCDA_DEIRA  (Q9RTK2), DCDA_FRATH  (Q2A5D5), DCDA_METTH  (O27390), 
DCDA_MYCLE  (Q50140), DCDA_THEAC  (Q9HK20), DCDA_THEMA  (Q9X1K5), 
DCDA_ZYMMO  (Q9Z661), DCOR_SCHPO  (Q9UQW9), DOKDC_SALTY (Q8ZNC4), 
NSPC_CAMJ8  (A8FNH9), NSPC_VIBAL  (Q56575), NSPC_VIBCH  (Q9KRL4), 
NSPC_VIBCO  (C6YCI2), NSPC_VIBVU  (Q8D8D2), SPEA2_SYNY3 (P72587), 
SPEA_GLOVI  (Q7NE10), SPEA_SHEAM  (A1S712), SPEA_SHEB2  (B8EAI2), 
SPEA_SHEB5  (A3D3G2), SPEA_SHEB8  (A6WM65), SPEA_SHEB9  (A9KY70), 
SPEA_SHEDO  (Q12LW6), SPEA_SHEFN  (Q083L6), SPEA_SHEHH  (B0TQX3), 
SPEA_SHELP  (A3QDD8), SPEA_SHEON  (Q8EFU5), SPEA_SHEPA  (A8H5G3), 
SPEA_SHEPC  (A4Y5Y9), SPEA_SHEPW  (B8CR70), SPEA_SHESA  (A0KVN8), 
SPEA_SHESH  (A8FWJ3), SPEA_SHESM  (Q0HJY2), SPEA_SHESR  (Q0HW78), 
SPEA_SHESW  (A1RKK8), SPEA_SHEWM  (B1KRD4), SPEA_VIBCH  (Q9KLD1), 
SPEA_VIBPA  (Q87JS8), SPEA_VIBVU  (Q8DA54), SPEA_VIBVY  (Q7MK24)
» more

UniProtKB/Swiss-Prot
False positive sequences		 42 sequences 

AATR2_DICDI (Q54K00), AB15B_ARATH (Q9LHD1), AFLO_ASPPU  (Q9UQY0), 

APF5_GIBF5  (S0DL59), COMT1_MAIZE (Q06509), CUDP_METAN  (P29138), 
DCDA_HELPX  (B4XMC6), DPFGI_GIBZE (I1RL18), DPMPI_MACPH (K2RGJ8), 
EF114_ARATH (Q9FH54), EPAD1_ORYSJ (Q75GY0), GRF1_MAIZE  (A0A060D764), 
GSFD_PENAE  (D7PI18), HMDH_CANAL  (A0A1D8PD39), HMDH_CYBJA  (O74164), 
HMDH_GANLU  (B2KX91), MCRC_METVA  (P07960), MRAY_GEOMG  (Q39YM2), 
MRAY_GEOSL  (Q748D3), NBN_DANRE   (Q5I2W8), OMT1_ORYSJ  (Q6ZD89), 
OMTB_ASPFN  (Q9P900), PBCC_EMENI  (C8VN86), PFDA_METLZ  (A2STI6), 
PPE34_MYCTU (Q79FI9), PPN_MOUSE   (Q9EPX2), PYRH_VESOH  (A5CXD7), 
RABE2_HUMAN (Q9H5N1), RABE2_PONAB (Q5RCR6), RU1C_MYCMD  (Q4P2Q5), 
SBT13_ARATH (Q9FLI4), SBT17_ARATH (O65351), SBT3D_ARATH (Q8GUK4), 
SBT42_ARATH (O23357), SEPF_PROM3  (A2CBM2), SEPF_PROMM  (Q7V8W6), 
TM86B_PIG   (F1RMN2), TPC14_HUMAN (Q8WVR3), UXP_ADE05   (A8W995), 
Y4YA_SINFN  (P55709), YP251_YEAST (Q12058), ZRP4_MAIZE  (P47917)
» more

PDB
[Detailed view]		 38 PDB

pdb_00001d7k; pdb_00001f3t; pdb_00001hkv; pdb_00001hkw; pdb_00001knw; pdb_00001ko0; pdb_00001qu4; pdb_00001szr; pdb_00001tuf; pdb_00001twi; pdb_00002j66; pdb_00002o0t; pdb_00002on3; pdb_00002oo0; pdb_00002p3e; pdb_00002tod; pdb_00003btn; pdb_00003n2b; pdb_00003nzq; pdb_00004zgy; pdb_00004zgz; pdb_00005bwa; pdb_00005gjm; pdb_00005gjn; pdb_00005gjo; pdb_00005gjp; pdb_00005x7m; pdb_00005x7n; pdb_00006n2a; pdb_00006n2f; pdb_00007odc; pdb_00007ru7; pdb_00007s3f; pdb_00007s3g; pdb_00007u6p; pdb_00007u6u; pdb_00009b8m; pdb_00009b8n
» more