PROSITE entry PS00892

View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission

General information about the entry

Entry name [info]	HIT_1
Accession [info]	PS00892
Entry type [info]	PATTERN
Date [info]	01-OCT-1993 CREATED; 01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00694

Name and characterization of the entry

Description [info]	HIT domain signature.
Pattern [info]	[NQAR]-x(4)-[GSAVY]-x-[QFLPA]-x-[LIVMY]-x-[HWYRQ]-[LIVMFYST]-H-[LIVMFT]- H-[LIVMF]-[LIVMFPT]-[PSGAWN].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_05 which contains 572'214 sequence entries.

Total number of hits	87 in 87 different sequences
Number of true positive hits	87 in 87 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	12
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	87.88 %

Comments [info]

Taxonomic range [info]	Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	1
Version [info]	2

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

87 sequences

APH1_SCHPO  (P49776), APTX_BOVIN  (Q7YRZ2), APTX_CANLF  (P61797),

APTX_CHICK  (P61798), APTX_CIOIN  (P61802), APTX_DANRE  (P61799), 
APTX_DROME  (Q8MSG8), APTX_HUMAN  (Q7Z2E3), APTX_MACFA  (Q9BGQ0), 
APTX_MOUSE  (Q7TQC5), APTX_PIG(Q7YRZ1), APTX_RAT(Q8K4H4), 
APTX_TAKRU  (P61800), APTX_XENLA  (Q7T287), APTX_XENTR  (P61801), 
BH140_ARATH (Q9M041), DCPS_BOVIN  (Q8MJJ7), DCPS_HUMAN  (Q96C86), 
DCPS_MOUSE  (Q9DAR7), DCPS_PIG(Q8MIZ3), DCPS_RAT(Q8K4F7), 
DCPS_YEAST  (Q06151), DCS2_YEAST  (Q12123), FHIT_ARATH  (F4KEV7), 
FHIT_BOVIN  (Q1KZG4), FHIT_DICDI  (Q86KK2), FHIT_HUMAN  (P49789), 
FHIT_MOUSE  (O89106), FHIT_RAT(Q9JIX3), HINT1_ARATH (Q8GUN2), 
HINT1_BOVIN (P62958), HINT1_HUMAN (P49773), HINT1_MOUSE (P70349), 
HINT1_PONAB (Q5RF69), HINT1_RABIT (P80912), HINT1_RAT   (P62959), 
HINT2_BOVIN (Q8SQ21), HINT2_HUMAN (Q9BX68), HINT2_MOUSE (Q9D0S9), 
HINT3_ARATH (F4K1R2), HINT_CAEEL  (P53795), HINT_ECO57  (P0ACE8), 
HINT_ECOLI  (P0ACE7), HINT_HAEIN  (P44956), HINT_SHIFL  (P0ACE9), 
HITA_NEIGO  (O07817), HIT_BACSU   (O07513), HIT_ENTH1   (C4LYI2), 
HNT1_CANAL  (Q59WG0), HNT1_SCHPO  (O94586), HNT1_YEAST  (Q04344), 
HNT2_YEAS1  (B3LFZ1), HNT2_YEAS2  (C7GQV5), HNT2_YEAS6  (B5VGI4), 
HNT2_YEAS7  (A6ZYQ3), HNT2_YEAS8  (C8Z5L6), HNT2_YEAST  (P49775), 
NFT1_CAEEL  (O76463), NFT1_DROME  (O76464), PKIA_DICDI  (Q23921), 
Y1390_SYNE7 (P32084), Y664_CHLMU  (Q9PK09), Y866_METJA  (Q58276), 
YHI1_MYCBO  (P0A5B6), YHI1_MYCLE  (P49774), YHI1_MYCTO  (P9WML2), 
YHI1_MYCTU  (P9WML3), YHI2_MYCTO  (P9WML0), YHI2_MYCTU  (P9WML1), 
YHIT_AQUAE  (O66536), YHIT_AZOBR  (P26724), YHIT_BORBU  (P94252), 
YHIT_BUCAI  (P57438), YHIT_BUCAP  (Q8K9I9), YHIT_BUCBP  (Q89AG5), 
YHIT_CHLPN  (Q9Z863), YHIT_CHLTR  (O84390), YHIT_HELPJ  (P64383), 
YHIT_HELPY  (P64382), YHIT_MESHY  (P32083), YHIT_MYCGE  (P47378), 
YHIT_MYCPN  (P75504), YHIT_RICPR  (Q9ZDL1), YHIT_SACS2  (P95937), 
YHIT_SYNY3  (P73481), ZB14_BRAJU  (P42855), ZB14_MAIZE  (P42856)

» more

Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

UniProtKB/Swiss-Prot
False negative sequences

12 sequences

AP4A_MYCTO  (P9WMK8), AP4A_MYCTU  (P9WMK9), APTX_YEAST  (Q08702),

HINT3_BOVIN (Q2YDJ4), HINT3_DANRE (Q5PNN8), HINT3_HUMAN (Q9NQE9), 
HINT3_MOUSE (Q9CPS6), HINT3_PONAB (Q5R9L4), HINT3_RAT   (Q8K3P7), 
HINT3_XENTR (Q28BZ2), HINT4_ARATH (Q84VV6), Y2839_DICDI (Q558W0)

» more

PDB
[Detailed view]

95 PDB

1AV5; 1EMS; 1FHI; 1FIT; 1KPA; 1KPB; 1KPC; 1KPE; 1KPF; 1RZY; 1VLR; 1XML; 1XMM; 1Y23; 2FIT; 3BL7; 3BL9; 3BLA; 3FIT; 3N1S; 3O1C; 3O1X; 3O1Z; 3OJ7; 3OMF; 3OXK; 3QGZ; 3RHN; 3TW2; 4EQE; 4EQG; 4EQH; 4FIT; 4INC; 4INI; 4NDF; 4NDG; 4NDH; 4NDI; 4QDE; 4QDV; 4QEB; 4RHN; 4ZGL; 4ZKL; 4ZKV; 5ED3; 5EMT; 5FIT; 5I2E; 5I2F; 5IPD; 5IPE; 5KLZ; 5KM0; 5KM1; 5KM2; 5KM3; 5KM4; 5KM5; 5KM8; 5KM9; 5KMC; 5O8I; 5OSY; 5RHN; 5WAA; 6B42; 6CVO; 6CVP; 6CVQ; 6CVR; 6CVS; 6FIT; 6G9Z; 6IQ1; 6J53; 6J58; 6N3V; 6N3W; 6N3X; 6N3Y; 6RHN; 6YI0; 6YPR; 6YPX; 6YQD; 6YQM; 6YVP; 7Q2U; 8P8P; 8PA6; 8PA9; 8PAF; 8PAI
» more