PROSITE entry PS00892
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General information about the entry
| Entry name [info] | HIT_1 |
| Accession [info] | PS00892 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-APR-2006 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00694 |
Name and characterization of the entry
| Description [info] | HIT domain signature. |
| Pattern [info] |
[NQAR]-x(4)-[GSAVY]-x-[QFLPA]-x-[LIVMY]-x-[HWYRQ]-[LIVMFYST]-H-[LIVMFT]- H-[LIVMF]-[LIVMFPT]-[PSGAWN]. |
Numerical results [info]
| Total number of hits | 87 in 87 different sequences |
| Number of true positive hits | 87 in 87 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 12 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.88 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 2 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
87 sequences
APH1_SCHPO (P49776), APTX_BOVIN (Q7YRZ2), APTX_CANLF (P61797), APTX_CHICK (P61798), APTX_CIOIN (P61802), APTX_DANRE (P61799), APTX_DROME (Q8MSG8), APTX_HUMAN (Q7Z2E3), APTX_MACFA (Q9BGQ0), APTX_MOUSE (Q7TQC5), APTX_PIG(Q7YRZ1), APTX_RAT(Q8K4H4), APTX_TAKRU (P61800), APTX_XENLA (Q7T287), APTX_XENTR (P61801), BH140_ARATH (Q9M041), DCPS_BOVIN (Q8MJJ7), DCPS_HUMAN (Q96C86), DCPS_MOUSE (Q9DAR7), DCPS_PIG(Q8MIZ3), DCPS_RAT(Q8K4F7), DCPS_YEAST (Q06151), DCS2_YEAST (Q12123), FHIT_ARATH (F4KEV7), FHIT_BOVIN (Q1KZG4), FHIT_DICDI (Q86KK2), FHIT_HUMAN (P49789), FHIT_MOUSE (O89106), FHIT_RAT(Q9JIX3), HINT1_ARATH (Q8GUN2), HINT1_BOVIN (P62958), HINT1_HUMAN (P49773), HINT1_MOUSE (P70349), HINT1_PONAB (Q5RF69), HINT1_RABIT (P80912), HINT1_RAT (P62959), HINT2_BOVIN (Q8SQ21), HINT2_HUMAN (Q9BX68), HINT2_MOUSE (Q9D0S9), HINT3_ARATH (F4K1R2), HINT_CAEEL (P53795), HINT_ECO57 (P0ACE8), HINT_ECOLI (P0ACE7), HINT_HAEIN (P44956), HINT_SHIFL (P0ACE9), HITA_NEIGO (O07817), HIT_BACSU (O07513), HIT_ENTH1 (C4LYI2), HNT1_CANAL (Q59WG0), HNT1_SCHPO (O94586), HNT1_YEAST (Q04344), HNT2_YEAS1 (B3LFZ1), HNT2_YEAS2 (C7GQV5), HNT2_YEAS6 (B5VGI4), HNT2_YEAS7 (A6ZYQ3), HNT2_YEAS8 (C8Z5L6), HNT2_YEAST (P49775), NFT1_CAEEL (O76463), NFT1_DROME (O76464), PKIA_DICDI (Q23921), Y1390_SYNE7 (P32084), Y664_CHLMU (Q9PK09), Y866_METJA (Q58276), YHI1_MYCBO (P0A5B6), YHI1_MYCLE (P49774), YHI1_MYCTO (P9WML2), YHI1_MYCTU (P9WML3), YHI2_MYCTO (P9WML0), YHI2_MYCTU (P9WML1), YHIT_AQUAE (O66536), YHIT_AZOBR (P26724), YHIT_BORBU (P94252), YHIT_BUCAI (P57438), YHIT_BUCAP (Q8K9I9), YHIT_BUCBP (Q89AG5), YHIT_CHLPN (Q9Z863), YHIT_CHLTR (O84390), YHIT_HELPJ (P64383), YHIT_HELPY (P64382), YHIT_MESHY (P32083), YHIT_MYCGE (P47378), YHIT_MYCPN (P75504), YHIT_RICPR (Q9ZDL1), YHIT_SACS2 (P95937), YHIT_SYNY3 (P73481), ZB14_BRAJU (P42855), ZB14_MAIZE (P42856)» more
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| UniProtKB/Swiss-Prot False negative sequences |
12 sequences
AP4A_MYCTO (P9WMK8), AP4A_MYCTU (P9WMK9), APTX_YEAST (Q08702), HINT3_BOVIN (Q2YDJ4), HINT3_DANRE (Q5PNN8), HINT3_HUMAN (Q9NQE9), HINT3_MOUSE (Q9CPS6), HINT3_PONAB (Q5R9L4), HINT3_RAT (Q8K3P7), HINT3_XENTR (Q28BZ2), HINT4_ARATH (Q84VV6), Y2839_DICDI (Q558W0)» more |
| PDB [Detailed view] |
95 PDB
1AV5; 1EMS; 1FHI; 1FIT; 1KPA; 1KPB; 1KPC; 1KPE; 1KPF; 1RZY; 1VLR; 1XML; 1XMM; 1Y23; 2FIT; 3BL7; 3BL9; 3BLA; 3FIT; 3N1S; 3O1C; 3O1X; 3O1Z; 3OJ7; 3OMF; 3OXK; 3QGZ; 3RHN; 3TW2; 4EQE; 4EQG; 4EQH; 4FIT; 4INC; 4INI; 4NDF; 4NDG; 4NDH; 4NDI; 4QDE; 4QDV; 4QEB; 4RHN; 4ZGL; 4ZKL; 4ZKV; 5ED3; 5EMT; 5FIT; 5I2E; 5I2F; 5IPD; 5IPE; 5KLZ; 5KM0; 5KM1; 5KM2; 5KM3; 5KM4; 5KM5; 5KM8; 5KM9; 5KMC; 5O8I; 5OSY; 5RHN; 5WAA; 6B42; 6CVO; 6CVP; 6CVQ; 6CVR; 6CVS; 6FIT; 6G9Z; 6IQ1; 6J53; 6J58; 6N3V; 6N3W; 6N3X; 6N3Y; 6RHN; 6YI0; 6YPR; 6YPX; 6YQD; 6YQM; 6YVP; 7Q2U; 8P8P; 8PA6; 8PA9; 8PAF; 8PAI » more |