PROSITE entry PS00895
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General information about the entry
Entry name [info] | 3_HYDROXYISOBUT_DH |
Accession [info] | PS00895 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-DEC-2001 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00697 |
Name and characterization of the entry
Description [info] | 3-hydroxyisobutyrate dehydrogenase signature. |
Pattern [info] |
[LIVMFY](2)-G-L-G-x-[MQ]-G-x(2)-[MA]-[SAV]-x-[SNHR]. |
Numerical results [info]
Total number of hits | 34 in 34 different sequences |
Number of true positive hits | 32 in 32 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 2 in 2 different sequences |
Number of false negative sequences | 19 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 94.12 % |
Recall (true positives / (true positives + false negatives)) | 62.75 % |
Comments [info]
Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
32 sequences
3HIDH_ARATH (Q9SUC0), 3HIDH_CAEEL (Q9XTI0), 3HIDH_DROME (Q9V8M5), 3HIDH_HUMAN (P31937), 3HIDH_MOUSE (Q99L13), 3HIDH_PONAB (Q5R5E7), 3HIDH_RABIT (P32185), 3HIDH_RAT (P29266), FHMCD_RHILO (Q988C8), GARR_ECOL6 (P0ABQ3), GARR_ECOLI (P0ABQ2), GLXR_ECOLI (P77161), GLYR1_AEDAE (Q175F8), GLYR1_ARATH (Q9LSV0), HMGD_EUBBA (Q0QLF5), LTND_ECOL6 (A0A0H2VA68), LTND_ECOLI (Q46888), LTND_HAEIN (P44979), LTND_PECAS (Q6CZ26), MMSB_MYCBO (P63936), MMSB_MYCTO (P9WNY4), MMSB_MYCTU (P9WNY5), MMSB_PSEAE (P28811), SERDH_PSEAE (Q9I5I6), SQUU_ECOLI (P0A9V8), SQUU_SALTY (Q9L7S0), SQUU_SHIFL (P0A9V9), Y1503_SHEFN (O33730), Y229_SYNY3 (Q55702), Y770_MYCTO (P9WNY2), Y770_MYCTU (P9WNY3), YKWC_BACSU (O34948)» more
|
UniProtKB/Swiss-Prot False negative sequences |
19 sequences
3HID1_ARATH (Q9SZE1), 3HID2_ARATH (Q9C991), 3HID3_ARATH (Q949M8), 3HIDH_BOVIN (Q2HJD7), 3HIDH_DICDI (Q54CX6), GLYR1_ANOGA (Q7Q161), GLYR1_BOVIN (A4FUF0), GLYR1_CHICK (Q5ZLS7), GLYR1_DANRE (Q5RKN4), GLYR1_DROME (Q8T079), GLYR1_DROPS (Q29NG1), GLYR1_HUMAN (Q49A26), GLYR1_MOUSE (Q922P9), GLYR1_PONAB (Q5R7T2), GLYR1_RAT (Q5RKH0), GLYR1_XENTR (Q562D5), GLYR2_ARATH (F4I907), LTND_CUPNH (Q0KBC7), YFJR_BACSU (O34969)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
3HIDH_MESAU (P86199) |
UniProtKB/Swiss-Prot False positive sequences |
2 sequences
MSOX_STRAW (Q827H4), MSOX_STRSB (P40854) |
PDB [Detailed view] |
20 PDB
2GF2; 2I9P; 3CKY; 3DOJ; 3OBB; 3Q3C; 4OM8; 5Y8G; 5Y8H; 5Y8I; 5Y8J; 5Y8K; 5Y8L; 5Y8M; 5Y8N; 5Y8O; 5Y8P; 6SM7; 6SMY; 6SMZ » more |