PROSITE logo

PROSITE entry PS00903


View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry

Entry name [info] CYT_DCMP_DEAMINASES_1
Accession [info] PS00903
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00702

Name and characterization of the entry

Description [info] Cytidine and deoxycytidylate deaminases zinc-binding region signature.
Pattern [info]
[CH]-[AGV]-E-x(2)-[LIVMFGAT]-[LIVM]-x(17,33)-P-C-x(2,8)-C-x(3)-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_03 which contains 571'609 sequence entries.


Total number of hits 256 in 248 different sequences
Number of true positive hits 251 in 243 different sequences
Number of 'unknown' hits 0
Number of false positive hits 5 in 5 different sequences
Number of false negative sequences 25
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 98.05 %
Recall (true positives / (true positives + false negatives)) 90.94 %

Comments [info]

Taxonomic range [info] Archaea, Bacteriophages, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 2
Site [info] zinc at position 1
Site [info] zinc at position 9
Site [info] zinc at position 11
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
243 sequences

AB3CA_FELCA (Q4VDN5), ABC3A_HUMAN (P31941), ABC3B_HUMAN (Q9UH17), 
ABC3C_GORGO (Q694B5), ABC3C_HUMAN (Q9NRW3), ABC3D_HUMAN (Q96AK3), 
ABC3F_HUMAN (Q8IUX4), ABC3G_CHLAE (Q7YR25), ABC3G_ERYPA (Q694C5), 
ABC3G_GORGO (Q694C1), ABC3G_HUMAN (Q9HC16), ABC3G_LAGLA (Q694B8), 
ABC3G_MACFA (Q694C2), ABC3G_MACMU (Q7YR23), ABC3G_MACNG (Q694C4), 
ABC3G_PANPA (Q694B6), ABC3G_PANTR (Q7YR24), ABC3G_PAPAN (Q694B7), 
ABC3G_PONPY (Q694C0), ABC3G_SAGLB (Q694B9), ABC3H_FELCA (A9QA56), 
ABC3H_HUMAN (Q6NTF7), ABC3H_MACMU (Q19Q52), ABC3H_PONPY (Q1WBT4), 
ABEC1_HUMAN (P41238), ABEC1_MESAU (Q9EQP0), ABEC1_MONDO (Q9TUI7), 
ABEC1_MOUSE (P51908), ABEC1_PONPY (Q694B3), ABEC1_RABIT (P47855), 
ABEC1_RAT   (P38483), ABEC3_CRILO (P60704), ABEC3_MOUSE (Q99J72), 
ABEC3_RAT   (P60705), ADAT2_BOVIN (Q5E9J7), ADAT2_DANRE (Q5RIV4), 
ADAT2_HUMAN (Q7Z6V5), ADAT2_MOUSE (Q6P6J0), ADAT2_XENLA (Q4V7V8), 
ADAT2_XENTR (Q0P4H0), AICDA_BOVIN (Q2PT36), AICDA_CANLF (Q75W64), 
AICDA_HUMAN (Q9GZX7), AICDA_MOUSE (Q9WVE0), BSD_ASPTE   (P0C2P0), 
BSD_ASPTN   (P0C2P1), BSD_COCIM   (P0CI02), BSR_BACCE   (P33967), 
CDA1_ARATH  (O65896), CDA2_ARATH  (O65571), CDA3_ARATH  (Q9S847), 
CDA5_ARATH  (Q9S7L8), CDA8_ARATH  (Q9XEX4), CDAC1_DANRE (Q5U3U4), 
CDAC1_HUMAN (Q9BWV3), CDAC1_MACFA (Q4R683), CDAC1_MOUSE (Q8BMD5), 
CDAC1_PONAB (Q5RAX4), CDD_ACTP2   (A3N1Z1), CDD_ACTP7   (B3GYC3), 
CDD_ACTPJ   (B0BQT2), CDD_ACTSZ   (A6VLF5), CDD_AERHH   (A0KJH4), 
CDD_AERS4   (A4SNI2), CDD_ALIF1   (Q5E4R6), CDD_ALIFM   (B5FEN2), 
CDD_BACSU   (P19079), CDD_CITK8   (A8AE87), CDD_CROS8   (A7MLJ4), 
CDD_ECO24   (A7ZNW5), CDD_ECO27   (B7UFF9), CDD_ECO45   (B7MF55), 
CDD_ECO55   (B7LA09), CDD_ECO57   (Q8X648), CDD_ECO5E   (B5YW75), 
CDD_ECO7I   (B7NMA8), CDD_ECO81   (B7MXF5), CDD_ECO8A   (B7M4Y8), 
CDD_ECOBW   (C4ZSM3), CDD_ECODH   (B1X7N2), CDD_ECOHS   (A8A204), 
CDD_ECOK1   (A1AD04), CDD_ECOL5   (Q0TFU8), CDD_ECOL6   (Q8FFV3), 
CDD_ECOLC   (B1IYC6), CDD_ECOLI   (P0ABF6), CDD_ECOLU   (B7NCH2), 
CDD_ECOSE   (B6I8J3), CDD_ECOSM   (B1LKP0), CDD_ECOUT   (Q1R9T0), 
CDD_EDWI9   (C5BCM4), CDD_ENT38   (A4WCI1), CDD_ERWT9   (B2VIF3), 
CDD_ESCF3   (B7LVA3), CDD_HAEDU   (Q7VMJ6), CDD_HAEI8   (Q4QK60), 
CDD_HAEIE   (A5UBV9), CDD_HAEIG   (A5UEI7), CDD_HAEIN   (P44325), 
CDD_HALH5   (Q9KD53), CDD_HISS1   (Q0I4X6), CDD_HISS2   (B0USP2), 
CDD_HUMAN   (P32320), CDD_KLEP3   (B5XP65), CDD_KLEP7   (A6TBN1), 
CDD_MANSM   (Q65RG8), CDD_MOUSE   (P56389), CDD_MYCGE   (P47298), 
CDD_MYCPI   (P47718), CDD_MYCPN   (P75051), CDD_MYCTO   (P9WPH2), 
CDD_MYCTU   (P9WPH3), CDD_PASMU   (Q9CP11), CDD_PECAS   (Q6D3B4), 
CDD_PECCP   (C6DDS7), CDD_PHOLL   (Q7N6K3), CDD_PHOPR   (Q6LRI0), 
CDD_PROMH   (B4ESY3), CDD_PSET1   (Q3IBX5), CDD_SALA4   (B5EYN3), 
CDD_SALAR   (A9MKS5), CDD_SALCH   (Q57MF5), CDD_SALDC   (B5FMZ9), 
CDD_SALEP   (B5R153), CDD_SALG2   (B5RC22), CDD_SALHS   (B4TAK5), 
CDD_SALNS   (B4SY15), CDD_SALPA   (Q5PE68), CDD_SALPB   (A9N6L3), 
CDD_SALPC   (C0Q0V4), CDD_SALPK   (B5BE52), CDD_SALSV   (B4TNP0), 
CDD_SALTI   (Q8Z5A8), CDD_SALTY   (Q8ZNM0), CDD_SCHPO   (Q09190), 
CDD_SERP5   (A8GC32), CDD_SHEAM   (A1S723), CDD_SHEB2   (B8EF35), 
CDD_SHEB5   (A3D392), CDD_SHEB8   (A6WLY5), CDD_SHEB9   (A9KXF0), 
CDD_SHEFN   (Q083S7), CDD_SHEHH   (B0TQV3), CDD_SHELP   (A3QDC9), 
CDD_SHEON   (Q8EDG1), CDD_SHEPA   (A8H5H1), CDD_SHEPC   (A4Y5R0), 
CDD_SHEPW   (B8CR83), CDD_SHESA   (A0KYD1), CDD_SHESH   (A8FWK2), 
CDD_SHESM   (Q0HHI5), CDD_SHESR   (Q0HTT9), CDD_SHESW   (A1RL10), 
CDD_SHEWM   (B1KRC5), CDD_SHIB3   (B2TVV2), CDD_SHIBS   (Q322V3), 
CDD_SHIDS   (Q32EM3), CDD_SHIF8   (Q0T2Y0), CDD_SHIFL   (P0ABF7), 
CDD_SHISS   (Q3Z062), CDD_SODGM   (Q2NUD2), CDD_VIBA3   (B7VPF1), 
CDD_VIBC1   (A7MVH6), CDD_VIBC3   (A5F1V7), CDD_VIBCH   (Q9KSM5), 
CDD_VIBCM   (C3LLS7), CDD_VIBPA   (Q87Q52), CDD_VIBVU   (Q8DA31), 
CDD_VIBVY   (Q7MK48), CDD_YEAST   (Q06549), CDD_YERP3   (A7FJK3), 
CDD_YERPA   (Q1C9U7), CDD_YERPB   (B2JZJ6), CDD_YERPE   (Q8ZG08), 
CDD_YERPG   (A9R1B9), CDD_YERPN   (Q1CGT5), CDD_YERPP   (A4TKN7), 
CDD_YERPS   (Q66C79), CDD_YERPY   (B1JPZ5), COMEB_BACSU (P32393), 
DCTD_BPMD2  (O22000), DCTD_BPT2   (P00814), DCTD_BPT4   (P16006), 
DCTD_CAEEL  (P30648), DCTD_DROME  (Q9VWA2), DCTD_HUMAN  (P32321), 
DCTD_MOUSE  (Q8K2D6), DCTD_PONAB  (Q5RC69), DCTD_RAT(Q5M9G0), 
DCTD_SCHPO  (O43012), DCTD_YEAST  (P06773), FCA1_CANAL  (P78594), 
FCY1_YEAST  (Q12178), FCYS_SCHPO  (O59834), GSDA_ARATH  (Q94BU8), 
GUAD_BACSU  (O34598), RIBD1_BUCAI (P57533), RIBD1_BUCAP (Q8K9A4), 
RIBD_ACTPL  (P50853), RIBD_AQUAE  (O66534), RIBD_ARATH  (Q8GWP5), 
RIBD_BACAM  (P70814), RIBD_BACSU  (P17618), RIBD_BUCBP  (Q89AB0), 
RIBD_CHLPN  (Q9Z735), RIBD_CHLTR  (O84735), RIBD_CORAM  (O24750), 
RIBD_ECOLI  (P25539), RIBD_HAEIN  (P44326), RIBD_MAIZE  (B6TRH4), 
RIBD_MYCTO  (P9WPH0), RIBD_MYCTU  (P9WPH1), RIBD_SYNY3  (Q55158), 
TAD2_ARATH  (Q6IDB6), TAD2_SCHPO  (O94642), TAD2_YEAST  (P47058), 
TADA_AGRFC  (A9CK16), TADA_AQUAE  (O67050), TADA_BACSU  (P21335), 
TADA_BUCAI  (P57343), TADA_BUCAP  (Q8K9R4), TADA_BUCBP  (Q89AM8), 
TADA_ECO57  (Q8XA44), TADA_ECOL6  (Q8FF24), TADA_ECOLI  (P68398), 
TADA_HAEIN  (P44931), TADA_RICBR  (Q1RGK7), TADA_RICCN  (Q92G39), 
TADA_RICFE  (Q4UJW9), TADA_RICPR  (Q9ZCC6), TADA_RICTY  (Q68Y02), 
TADA_SALTI  (Q8XGY4), TADA_SALTY  (Q7CQ08), TADA_SHIFL  (P68397), 
TADA_STAAM  (Q99W51), TADA_STRP1  (P68999), TADA_STRP3  (P0DA20), 
TADA_STRP6  (Q5XE14), TADA_STRP8  (Q8P2R7), TADA_STRPQ  (P0DA21), 
TILS_THET2  (Q72IF6), TILS_THET8  (Q5SI38), YLXG_ALIFS  (P33968)
» more

UniProtKB/Swiss-Prot
False negative sequences
25 sequences

ABEC2_BOVIN (Q3SYR3), ABEC2_HUMAN (Q9Y235), ABEC2_MOUSE (Q9WV35), 
ABEC2_PONPY (Q694B4), ABEC4_HUMAN (Q8WW27), ABEC4_MACFA (Q8WP22), 
ABEC4_MOUSE (Q497M3), ABEC4_RAT   (Q6AXX9), ADAT3_DANRE (Q8JFW4), 
ADAT3_HUMAN (Q96EY9), ADAT3_MOUSE (Q6PAT0), ADAT3_RAT   (Q561R2), 
CDA4_ARATH  (Q9S7S2), CDA6_ARATH  (Q9SU86), CDA7_ARATH  (Q9SU87), 
CDA9_ARATH  (Q9S789), CDAT8_METKA (Q8TWU6), CDD_DICDI   (Q54I82), 
CDD_SPOPS   (Q9S3M0), RIB2_SCHPO  (P87241), RIBD_CHLMU  (Q9PLJ6), 
TAD3_ARATH  (F4KH86), TAD3_SCHPO  (Q9P7N4), TAD3_YEAST  (Q9URQ3), 
TADA_ARATH  (Q9S7I0)
» more

UniProtKB/Swiss-Prot
False positive sequences
5 sequences

SECA_COXBU  (Q83F06), SECA_PSEMY  (A4XQT3), SECA_SHELP  (A3QIL3), 
SECA_STUS1  (A4VPA3), Y949_METJA  (Q58359)
» more

PDB
[Detailed view]
86 PDB

1AF2; 1ALN; 1CTT; 1CTU; 1JTK; 1MQ0; 1OX7; 1P6O; 1R5T; 1RB7; 1TIY; 1UAQ; 1UWZ; 1UX0; 1UX1; 1VQ2; 1WKQ; 1WN5; 1WN6; 1WWR; 1YSB; 1YSD; 1Z3A; 1ZAB; 2A8N; 2B3J; 2B3Z; 2D5N; 2FR5; 2FR6; 2G6V; 2NX8; 2O3K; 2O7P; 2OBC; 2W4L; 2Z3G; 2Z3H; 2Z3J; 3DH1; 3EX8; 3IJF; 3OJ6; 4EG2; 4G3M; 4WIF; 4WIG; 5CQH; 5CQI; 5JJ4; 5W0Z; 5ZVA; 5ZVB; 6B0B; 6BWY; 6K63; 6L08; 6VPC; 7BV5; 7CPH; 7DBF; 7DCA; 7DCB; 7DCW; 7DGC; 7DH1; 7DLC; 7DM5; 7DM6; 7DOW; 7DOX; 7DOY; 7DPK; 7DQN; 7NZ7; 7NZ8; 7NZ9; 8E2P; 8E2Q; 8E2R; 8E2S; 8H0I; 8I3N; 8I3O; 8I3P; 8J62
» more