PROSITE entry PS00908
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| Entry name [info] | MR_MLE_1 |
| Accession [info] | PS00908 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00706 |
Name and characterization of the entry
| Description [info] | Mandelate racemase / muconate lactonizing enzyme family signature 1. |
| Pattern [info] |
[AT]-x-[SAGCN]-[SAGC]-[LIVM]-[DEQ]-x-A-[LA]-x-[DE]-[LIA]-x-[GA]-[KRQ]- x(4)-[PSA]-[LIV]-x(2)-L-[LIVMF]-G. |
Numerical results [info]
| Total number of hits | 154 in 154 different sequences |
| Number of true positive hits | 154 in 154 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 37 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 80.63 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
154 sequences
AEEP_CLOAB (Q97MK4), AEEP_ECOLI (P51981), CATB1_ACILW (O33946), CATB2_ACILW (O33949), CATB_ACIAD (Q43931), CATB_PSEPU (P08310), CATB_RHOOP (P95608), CBNB_CUPNE (P83763), CLCB_PSEPU (P11452), DGD_PANAM (D4GJ14), DGD_SALEP (B5R541), DGD_SALV4 (B5QBD4), DGOD1_ECOSM (B1LPS5), DGOD2_ECOSM (B1LL17), DGOD_CROS8 (A7MN07), DGOD_ECO24 (A7ZTP7), DGOD_ECO45 (B7MGB3), DGOD_ECO55 (B7L836), DGOD_ECO7I (B7NQZ2), DGOD_ECO81 (B7N1Z6), DGOD_ECO8A (B7M4I1), DGOD_ECOBW (C4ZYW9), DGOD_ECODH (B1X9C1), DGOD_ECOHS (A8A6F2), DGOD_ECOK1 (A1AHM7), DGOD_ECOL5 (Q0TB15), DGOD_ECOLC (B1IYQ2), DGOD_ECOLI (Q6BF17), DGOD_ECOLU (B7NF09), DGOD_ECOSE (B6I3S5), DGOD_ECOUT (Q1R4P4), DGOD_ENT38 (A4W4R9), DGOD_ESCF3 (B7LK34), DGOD_KLEP3 (B5XW18), DGOD_KLEP7 (A6TFZ4), DGOD_PECAS (Q6CYT9), DGOD_RALN1 (Q8XVS8), DGOD_RALPJ (B2UCA8), DGOD_SALCH (Q57I11), DGOD_SALDC (B5FN00), DGOD_SALEP (B5QUN9), DGOD_SALG2 (B5RFZ8), DGOD_SALHS (B4TA81), DGOD_SALNS (B4SY97), DGOD_SALPB (A9MWL9), DGOD_SALPK (B5BIK9), DGOD_SALTY (Q8ZKZ1), DGOD_SERP5 (A8G7R4), DGOD_VARPS (C5CZC3), DGOD_VEREI (A1WPC7), DGOD_XANAC (Q8PLN0), DGOD_XANC8 (Q4UTT5), DGOD_XANCB (B0RTW1), DGOD_XANCP (Q8P9V1), DGOD_XANE5 (Q3BUN6), DGOD_XANOM (Q2P1Q3), DGOD_XANOP (B2SV55), DMGD_CHRSD (Q1QT89), DMGD_HALED (E1V4Y0), DMGD_MUSP7 (C6CBG9), GAD_THETE (Q704D2), GCI_AGRFC (A9CEQ8), GUDX_ECOLI (Q46915), HYEP_ROSLO (F7ZLS5), IMAND_CATAD (C7PW26), IMAND_CLOB8 (A6M2W4), IMAND_ENT38 (A4W7D6), IMAND_ENTBW (A8RQK7), IMAND_ENTCS (C9CN91), IMAND_OCEGH (Q2CIN0), IMAND_PAESJ (C6CVY9), IMAND_PECAS (Q6DAR4), IMAND_PECCP (C6DI84), IMAND_PECPW (D0KC90), IMAND_PSECP (B8HCK2), IMAND_STRSH (B5GCP6), IMAND_VIBBS (A5KUH4), IMAND_VIBH1 (D0X4R4), IMND1_ENTGE (C8ZZN2), IMND1_VIBCR (C9NUM5), IMND2_ENTGE (C9A1P5), IMND2_VIBCY (A6AMN2), MAND1_CAUSK (B0T0B1), MAND1_CAUVC (Q9A4L8), MAND2_CAUSK (B0T4L2), MAND2_CAUVC (Q9AAR4), MAND_CELJU (B3PDB1), MAND_ECOL6 (Q8FHC7), MAND_ECOMS (D8ADB5), MAND_ENT38 (A4WA78), MAND_ESCAT (B1ELW6), MAND_MARMS (A6VRA1), MAND_NOVAD (A4XF23), MAND_PECCP (C6D9S0), MAND_RHIWR (A5V6Z0), MAND_SALG2 (B5RAG0), MAND_SPHSS (Q1NAJ2), MAND_STRS3 (D9UNB2), MAND_XANOB (G7TAD9), MANR_PSEPU (P11444), RHMD_AZOC5 (A8I5F1), RHMD_BURA4 (B1YMY4), RHMD_BURCH (A0KDV2), RHMD_BURCM (Q0BA70), RHMD_BURO0 (B1KAV6), RHMD_BURO1 (Q1BGJ0), RHMD_CALMQ (A8MA91), RHMD_DELAS (A9BQY2), RHMD_ECO27 (B7UFQ9), RHMD_ECO45 (B7MG14), RHMD_ECO57 (Q8XE07), RHMD_ECO81 (B7MXS8), RHMD_ECOBW (C4ZU89), RHMD_ECODH (B1X8W0), RHMD_ECOHS (A8A2B3), RHMD_ECOK1 (A1AD99), RHMD_ECOL5 (Q0TFJ5), RHMD_ECOL6 (Q8FFM8), RHMD_ECOLC (B1IXU0), RHMD_ECOLI (P77215), RHMD_ECOSM (B1LLK1), RHMD_ECOUT (Q1R9G8), RHMD_KLEP3 (B5XNY1), RHMD_KLEP7 (A6TBU8), RHMD_PARP8 (B2JLI8), RHMD_PARPJ (B2TFM7), RHMD_PARXL (Q13LW5), RHMD_POLSJ (Q12DF1), RHMD_SACEN (A4FLW9), RHMD_SALA4 (B5EZH0), RHMD_SALCH (Q57M62), RHMD_SALDC (B5FNT1), RHMD_SALEP (B5R264), RHMD_SALG2 (B5RCB6), RHMD_SALHS (B4TBF8), RHMD_SALNS (B4SYW3), RHMD_SALPA (Q5PIM9), RHMD_SALPB (A9N5C2), RHMD_SALPC (C0Q077), RHMD_SALPK (B5BCQ4), RHMD_SALSV (B4TPH4), RHMD_SALTI (Q8Z548), RHMD_SALTY (Q8ZNF9), RHMD_SHIBS (Q31Z80), RHMD_SHISS (Q3YZV9), RHMD_SPHSS (Q1NEI8), RHMD_TOLAT (C4LDK0), RHMD_VEREI (A1WFL2), RSPA_ECOLI (P38104), TCBD_PSESQ (P27099), TFDD1_CUPPJ (P05404), TFDD2_CUPPJ (P42428), TFDD_DELAC (Q9RNZ9), YIN2_STRAM (P32426)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
37 sequences
AAEP_CYTH3 (Q11T61), ACI_STRCO (Q9RKF7), ACI_VIBSJ (H2IFX0), AEEP_BACSU (O34508), AEEP_BACTN (Q8A861), AEEP_FRATN (A0Q5S7), AEEP_THEMA (Q9WXM1), AREP_HERA2 (A9B055), AXEP_FLAJ1 (A5FHW9), AXEP_MARSH (A4AQI7), AXEP_PEDPL (B9XEK4), AXEP_POPTR (B9I2J6), C3HPD_ANCN5 (D7A0Y2), C3HPD_ROSAI (A0NXQ8), DGD_STRBB (D7BPX0), ENOF1_BOVIN (Q2KIA9), ENOF1_HUMAN (Q7L5Y1), ENOF1_PONAB (Q5RAT4), ENOF1_XENLA (Q6INX4), GAD_SACS2 (Q97U27), GALRD_OCEIH (Q8EMJ9), HPBD_PARDP (A1B198), HPBD_SALBH (Q0FPQ4), HYEP_CITBB (B5EFW2), HYEP_ENTFA (Q834W6), HYEP_FLABM (C0BK17), KRDE_DESAH (C0QM06), KRDE_METCA (Q607C7), LGD1_HYPJE (Q0QWS4), NSAR_BACCR (Q81IL5), PHYLO_ARATH (Q15KI9), TAGAD_SALTY (Q8ZL58), TARD_BRADU (Q89FH0), XEEP_FRAP2 (B0TZW0), XEEP_SULDN (Q30PM2), Y4701_DICDI (P0CC06), YITF_BACSU (O06741)» more |
| PDB [Detailed view] |
72 PDB
1DTN; 1JPD; 1MDL; 1MDR; 1MNS; 1MRA; 1MUC; 1NU5; 2CHR; 2GSH; 2I5Q; 2MNR; 2MUC; 2P3Z; 2QJJ; 2QJM; 2QJN; 3BOX; 3BSM; 3CXO; 3D46; 3D47; 3DFH; 3GY1; 3MUC; 3OW1; 3P93; 3PK7; 3QKE; 3R25; 3RGT; 3RR1; 3RRA; 3S47; 3SBF; 3T6C; 3THU; 3TJI; 3TW9; 3TWA; 3TWB; 3UXK; 3UXL; 3V3W; 3V4B; 3VCN; 4E4F; 4F4R; 4FI4; 4FP1; 4GGB; 4GGH; 4GIR; 4GIS; 4GME; 4GYP; 4HNC; 4HNL; 4HPN; 4IHC; 4IL0; 4IL2; 4K1W; 4K2S; 4K8G; 4KPL; 4KT2; 4KWS; 4M6U; 4X2P; 6VIM; 7MQX » more |