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Entry: PS00908

General information about the entry

Entry name [info] MR_MLE_1
Accession [info] PS00908
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-DEC-2001 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00706

Name and characterization of the entry

Description [info] Mandelate racemase / muconate lactonizing enzyme family signature 1.
Pattern [info]
[AT]-x-[SAGCN]-[SAGC]-[LIVM]-[DEQ]-x-A-[LA]-x-[DE]-[LIA]-x-[GA]-[KRQ]-
x(4)-[PSA]-[LIV]-x(2)-L-[LIVMF]-G.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 153 in 153 different sequences
Number of true positive hits 153 in 153 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 36
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 80.95 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
153 sequences

AEEP_CLOAB  (Q97MK4    ), AEEP_ECOLI  (P51981    ), CATB1_ACILW (O33946    ), 
CATB2_ACILW (O33949    ), CATB_ACIAD  (Q43931    ), CATB_PSEPU  (P08310    ), 
CATB_RHOOP  (P95608    ), CBNB_CUPNE  (P83763    ), CLCB_PSEPU  (P11452    ), 
DGD_PANAM   (D4GJ14    ), DGD_SALEP   (B5R541    ), DGD_SALVI   (B5QBD4    ), 
DGOD1_ECOSM (B1LPS5    ), DGOD2_ECOSM (B1LL17    ), DGOD_CROS8  (A7MN07    ), 
DGOD_ECO24  (A7ZTP7    ), DGOD_ECO45  (B7MGB3    ), DGOD_ECO55  (B7L836    ), 
DGOD_ECO7I  (B7NQZ2    ), DGOD_ECO81  (B7N1Z6    ), DGOD_ECO8A  (B7M4I1    ), 
DGOD_ECOBW  (C4ZYW9    ), DGOD_ECODH  (B1X9C1    ), DGOD_ECOHS  (A8A6F2    ), 
DGOD_ECOK1  (A1AHM7    ), DGOD_ECOL5  (Q0TB15    ), DGOD_ECOLC  (B1IYQ2    ), 
DGOD_ECOLI  (Q6BF17    ), DGOD_ECOLU  (B7NF09    ), DGOD_ECOSE  (B6I3S5    ), 
DGOD_ECOUT  (Q1R4P4    ), DGOD_ENT38  (A4W4R9    ), DGOD_ESCF3  (B7LK34    ), 
DGOD_KLEP3  (B5XW18    ), DGOD_KLEP7  (A6TFZ4    ), DGOD_PECAS  (Q6CYT9    ), 
DGOD_RALPJ  (B2UCA8    ), DGOD_RALSO  (Q8XVS8    ), DGOD_SALCH  (Q57I11    ), 
DGOD_SALDC  (B5FN00    ), DGOD_SALEP  (B5QUN9    ), DGOD_SALG2  (B5RFZ8    ), 
DGOD_SALHS  (B4TA81    ), DGOD_SALNS  (B4SY97    ), DGOD_SALPB  (A9MWL9    ), 
DGOD_SALPK  (B5BIK9    ), DGOD_SALTY  (Q8ZKZ1    ), DGOD_SERP5  (A8G7R4    ), 
DGOD_VARPS  (C5CZC3    ), DGOD_VEREI  (A1WPC7    ), DGOD_XANAC  (Q8PLN0    ), 
DGOD_XANC5  (Q3BUN6    ), DGOD_XANC8  (Q4UTT5    ), DGOD_XANCB  (B0RTW1    ), 
DGOD_XANCP  (Q8P9V1    ), DGOD_XANOM  (Q2P1Q3    ), DGOD_XANOP  (B2SV55    ), 
DMGD_CHRSD  (Q1QT89    ), DMGD_DICP7  (C6CBG9    ), DMGD_HALED  (E1V4Y0    ), 
GAD_THETE   (Q704D2    ), GCI_AGRFC   (A9CEQ8    ), GUDX_ECOLI  (Q46915    ), 
HYEP_ROSLO  (F7ZLS5    ), IMAND_CATAD (C7PW26    ), IMAND_CLOB8 (A6M2W4    ), 
IMAND_CLOBW (A8RQK7    ), IMAND_ENT38 (A4W7D6    ), IMAND_ENTCS (C9CN91    ), 
IMAND_OCEGH (Q2CIN0    ), IMAND_PAESJ (C6CVY9    ), IMAND_PECAS (Q6DAR4    ), 
IMAND_PECCP (C6DI84    ), IMAND_PECPW (D0KC90    ), IMAND_PSECP (B8HCK2    ), 
IMAND_STRSH (B5GCP6    ), IMAND_VIBBS (A5KUH4    ), IMAND_VIBH1 (D0X4R4    ), 
IMND1_ENTGE (C8ZZN2    ), IMND1_VIBCR (C9NUM5    ), IMND2_ENTGE (C9A1P5    ), 
IMND2_VIBCY (A6AMN2    ), MAND1_CAUSK (B0T0B1    ), MAND1_CAUVC (Q9A4L8    ), 
MAND2_CAUSK (B0T4L2    ), MAND2_CAUVC (Q9AAR4    ), MAND_CELJU  (B3PDB1    ), 
MAND_ECOL6  (Q8FHC7    ), MAND_ECOMS  (D8ADB5    ), MAND_ENT38  (A4WA78    ), 
MAND_ESCAT  (B1ELW6    ), MAND_MARMS  (A6VRA1    ), MAND_NOVAD  (A4XF23    ), 
MAND_PECCP  (C6D9S0    ), MAND_SALG2  (B5RAG0    ), MAND_SPHSS  (Q1NAJ2    ), 
MAND_SPHWW  (A5V6Z0    ), MAND_STRS3  (D9UNB2    ), MAND_XANOB  (G7TAD9    ), 
MANR_PSEPU  (P11444    ), RHMD_AZOC5  (A8I5F1    ), RHMD_BURA4  (B1YMY4    ), 
RHMD_BURCA  (Q1BGJ0    ), RHMD_BURCC  (B1KAV6    ), RHMD_BURCH  (A0KDV2    ), 
RHMD_BURCM  (Q0BA70    ), RHMD_CALMQ  (A8MA91    ), RHMD_DELAS  (A9BQY2    ), 
RHMD_ECO27  (B7UFQ9    ), RHMD_ECO45  (B7MG14    ), RHMD_ECO57  (Q8XE07    ), 
RHMD_ECO81  (B7MXS8    ), RHMD_ECOBW  (C4ZU89    ), RHMD_ECODH  (B1X8W0    ), 
RHMD_ECOHS  (A8A2B3    ), RHMD_ECOK1  (A1AD99    ), RHMD_ECOL5  (Q0TFJ5    ), 
RHMD_ECOL6  (Q8FFM8    ), RHMD_ECOLC  (B1IXU0    ), RHMD_ECOLI  (P77215    ), 
RHMD_ECOSM  (B1LLK1    ), RHMD_ECOUT  (Q1R9G8    ), RHMD_KLEP3  (B5XNY1    ), 
RHMD_KLEP7  (A6TBU8    ), RHMD_PARP8  (B2JLI8    ), RHMD_PARPJ  (B2TFM7    ), 
RHMD_PARXL  (Q13LW5    ), RHMD_POLSJ  (Q12DF1    ), RHMD_SACEN  (A4FLW9    ), 
RHMD_SALA4  (B5EZH0    ), RHMD_SALCH  (Q57M62    ), RHMD_SALDC  (B5FNT1    ), 
RHMD_SALEP  (B5R264    ), RHMD_SALG2  (B5RCB6    ), RHMD_SALHS  (B4TBF8    ), 
RHMD_SALNS  (B4SYW3    ), RHMD_SALPA  (Q5PIM9    ), RHMD_SALPB  (A9N5C2    ), 
RHMD_SALPC  (C0Q077    ), RHMD_SALPK  (B5BCQ4    ), RHMD_SALSV  (B4TPH4    ), 
RHMD_SALTI  (Q8Z548    ), RHMD_SALTY  (Q8ZNF9    ), RHMD_SHIBS  (Q31Z80    ), 
RHMD_SHISS  (Q3YZV9    ), RHMD_TOLAT  (C4LDK0    ), RHMD_VEREI  (A1WFL2    ), 
RSPA_ECOLI  (P38104    ), TCBD_PSESQ  (P27099    ), TFDD1_CUPPJ (P05404    ), 
TFDD2_CUPPJ (P42428    ), TFDD_DELAC  (Q9RNZ9    ), YIN2_STRAM  (P32426    )
» more

UniProtKB/Swiss-Prot
False negative sequences
36 sequences

AAEP_CYTH3  (Q11T61    ), ACI_VIBSJ   (H2IFX0    ), AEEP_BACSU  (O34508    ), 
AEEP_BACTN  (Q8A861    ), AEEP_FRATN  (A0Q5S7    ), AEEP_THEMA  (Q9WXM1    ), 
AREP_HERA2  (A9B055    ), AXEP_FLAJ1  (A5FHW9    ), AXEP_MARSH  (A4AQI7    ), 
AXEP_PEDPL  (B9XEK4    ), AXEP_POPTR  (B9I2J6    ), C3HPD_LABAI (A0NXQ8    ), 
C3HPD_STAND (D7A0Y2    ), DGD_STRBB   (D7BPX0    ), ENOF1_BOVIN (Q2KIA9    ), 
ENOF1_HUMAN (Q7L5Y1    ), ENOF1_PONAB (Q5RAT4    ), ENOF1_XENLA (Q6INX4    ), 
GAD_SACS2   (Q97U27    ), GALRD_OCEIH (Q8EMJ9    ), HPBD_PARDP  (A1B198    ), 
HPBD_SALBH  (Q0FPQ4    ), HYEP_ENTFA  (Q834W6    ), HYEP_FLABM  (C0BK17    ), 
HYEP_GEOBB  (B5EFW2    ), KRDE_DESAH  (C0QM06    ), KRDE_METCA  (Q607C7    ), 
LGD1_HYPJE  (Q0QWS4    ), NSAR_BACCR  (Q81IL5    ), PHYLO_ARATH (Q15KI9    ), 
TAGAD_SALTY (Q8ZL58    ), TARD_BRADU  (Q89FH0    ), XEEP_FRAP2  (B0TZW0    ), 
XEEP_SULDN  (Q30PM2    ), Y4701_DICDI (P0CC06    ), YITF_BACSU  (O06741    )
» more

PDB
[Detailed view]
70 PDB

1DTN; 1JPD; 1MDL; 1MDR; 1MNS; 1MRA; 1MUC; 1NU5; 2CHR; 2GSH; 2I5Q; 2MNR; 2MUC; 2P3Z; 2QJJ; 2QJM; 2QJN; 3BOX; 3BSM; 3CXO; 3D46; 3D47; 3DFH; 3GY1; 3MUC; 3OW1; 3P93; 3PK7; 3QKE; 3R25; 3RGT; 3RR1; 3RRA; 3S47; 3SBF; 3T6C; 3THU; 3TJI; 3TW9; 3TWA; 3TWB; 3UXK; 3UXL; 3V3W; 3V4B; 3VCN; 4E4F; 4F4R; 4FI4; 4FP1; 4GGB; 4GGH; 4GIR; 4GIS; 4GME; 4GYP; 4HNC; 4HNL; 4HPN; 4IHC; 4IL0; 4IL2; 4K1W; 4K2S; 4K8G; 4KPL; 4KT2; 4KWS; 4M6U; 4X2P
» more

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