 |
|
| Entry: PS00909 |
General information about the entry
| Entry name [info] | MR_MLE_2 |
| Accession [info] | PS00909 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-JUL-1999 DATA UPDATE; 12-AUG-2020 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00706 |
Name and characterization of the entry
| Description [info] | Mandelate racemase / muconate lactonizing enzyme family signature 2. |
| Pattern [info] |
[LIVF]-x(2)-D-x-[NH]-x(7)-[ACL]-x(6)-[LIVMF]-x(7)-[LIVM]-E-[DENQ]-P. |
Numerical results [info]
| Total number of hits | 81 in 81 different sequences |
| Number of true positive hits | 81 in 81 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 108 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 42.86 % |
Comments [info]
| Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | magnesium_manganese at position 3 |
| Site [info] | magnesium_manganese at position 12 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
81 sequences
AEEP_ECOLI (P51981 ), CATB1_ACILW (O33946 ), CATB2_ACILW (O33949 ), CATB_ACIAD (Q43931 ), CATB_PSEPU (P08310 ), CATB_RHOOP (P95608 ), CBNB_CUPNE (P83763 ), CLCB_PSEPU (P11452 ), DGD_PANAM (D4GJ14 ), DGD_SALEP (B5R541 ), DGD_SALVI (B5QBD4 ), DGOD1_ECOSM (B1LPS5 ), DGOD2_ECOSM (B1LL17 ), DGOD_CROS8 (A7MN07 ), DGOD_ECO24 (A7ZTP7 ), DGOD_ECO45 (B7MGB3 ), DGOD_ECO55 (B7L836 ), DGOD_ECO7I (B7NQZ2 ), DGOD_ECO81 (B7N1Z6 ), DGOD_ECO8A (B7M4I1 ), DGOD_ECOBW (C4ZYW9 ), DGOD_ECODH (B1X9C1 ), DGOD_ECOHS (A8A6F2 ), DGOD_ECOK1 (A1AHM7 ), DGOD_ECOL5 (Q0TB15 ), DGOD_ECOLC (B1IYQ2 ), DGOD_ECOLI (Q6BF17 ), DGOD_ECOLU (B7NF09 ), DGOD_ECOSE (B6I3S5 ), DGOD_ECOUT (Q1R4P4 ), DGOD_ENT38 (A4W4R9 ), DGOD_ESCF3 (B7LK34 ), DGOD_KLEP3 (B5XW18 ), DGOD_KLEP7 (A6TFZ4 ), DGOD_PECAS (Q6CYT9 ), DGOD_RALPJ (B2UCA8 ), DGOD_RALSO (Q8XVS8 ), DGOD_SALCH (Q57I11 ), DGOD_SALDC (B5FN00 ), DGOD_SALEP (B5QUN9 ), DGOD_SALG2 (B5RFZ8 ), DGOD_SALHS (B4TA81 ), DGOD_SALNS (B4SY97 ), DGOD_SALPB (A9MWL9 ), DGOD_SALPK (B5BIK9 ), DGOD_SALTY (Q8ZKZ1 ), DGOD_SERP5 (A8G7R4 ), DGOD_VARPS (C5CZC3 ), DGOD_VEREI (A1WPC7 ), DGOD_XANAC (Q8PLN0 ), DGOD_XANC5 (Q3BUN6 ), DGOD_XANC8 (Q4UTT5 ), DGOD_XANCB (B0RTW1 ), DGOD_XANCP (Q8P9V1 ), DGOD_XANOM (Q2P1Q3 ), DGOD_XANOP (B2SV55 ), DMGD_DICP7 (C6CBG9 ), ENOF1_BOVIN (Q2KIA9 ), ENOF1_HUMAN (Q7L5Y1 ), ENOF1_PONAB (Q5RAT4 ), HYEP_ENTFA (Q834W6 ), HYEP_FLABM (C0BK17 ), HYEP_ROSLO (F7ZLS5 ), IMAND_OCEGH (Q2CIN0 ), KRDE_METCA (Q607C7 ), LGD1_HYPJE (Q0QWS4 ), MAND_ECOL6 (Q8FHC7 ), MAND_ECOMS (D8ADB5 ), MAND_ENT38 (A4WA78 ), MAND_ESCAT (B1ELW6 ), MAND_PECCP (C6D9S0 ), MAND_SALG2 (B5RAG0 ), MANR_PSEPU (P11444 ), PHYLO_ARATH (Q15KI9 ), RSPA_ECOLI (P38104 ), TAGAD_SALTY (Q8ZL58 ), TCBD_PSESQ (P27099 ), TFDD1_CUPPJ (P05404 ), TFDD_DELAC (Q9RNZ9 ), XAD_HALVD (D4GP40 ), YIN2_STRAM (P32426 )» more
|
| UniProtKB/Swiss-Prot False negative sequences |
108 sequences
AAEP_CYTH3 (Q11T61 ), ACI_VIBSJ (H2IFX0 ), AEEP_BACSU (O34508 ), AEEP_BACTN (Q8A861 ), AEEP_CLOAB (Q97MK4 ), AEEP_FRATN (A0Q5S7 ), AEEP_THEMA (Q9WXM1 ), AREP_HERA2 (A9B055 ), AXEP_FLAJ1 (A5FHW9 ), AXEP_MARSH (A4AQI7 ), AXEP_PEDPL (B9XEK4 ), AXEP_POPTR (B9I2J6 ), C3HPD_LABAI (A0NXQ8 ), C3HPD_STAND (D7A0Y2 ), DGD_STRBB (D7BPX0 ), DMGD_CHRSD (Q1QT89 ), DMGD_HALED (E1V4Y0 ), ENOF1_XENLA (Q6INX4 ), GAD_SACS2 (Q97U27 ), GAD_THETE (Q704D2 ), GALRD_OCEIH (Q8EMJ9 ), GCI_AGRFC (A9CEQ8 ), HPBD_PARDP (A1B198 ), HPBD_SALBH (Q0FPQ4 ), HYEP_GEOBB (B5EFW2 ), IMAND_CATAD (C7PW26 ), IMAND_CLOB8 (A6M2W4 ), IMAND_CLOBW (A8RQK7 ), IMAND_CROTZ (C9Y5D5 ), IMAND_ENT38 (A4W7D6 ), IMAND_ENTCS (C9CN91 ), IMAND_PAESJ (C6CVY9 ), IMAND_PECAS (Q6DAR4 ), IMAND_PECCP (C6DI84 ), IMAND_PECPW (D0KC90 ), IMAND_PSECP (B8HCK2 ), IMAND_STRSH (B5GCP6 ), IMAND_VIBBS (A5KUH4 ), IMAND_VIBH1 (D0X4R4 ), IMND1_ENTGE (C8ZZN2 ), IMND1_VIBCR (C9NUM5 ), IMND2_ENTGE (C9A1P5 ), IMND2_VIBCY (A6AMN2 ), KRDE_DESAH (C0QM06 ), MAND1_CAUSK (B0T0B1 ), MAND1_CAUVC (Q9A4L8 ), MAND2_CAUSK (B0T4L2 ), MAND2_CAUVC (Q9AAR4 ), MAND_CELJU (B3PDB1 ), MAND_MARMS (A6VRA1 ), MAND_NOVAD (A4XF23 ), MAND_SPHSS (Q1NAJ2 ), MAND_SPHWW (A5V6Z0 ), MAND_STRS3 (D9UNB2 ), MAND_XANOB (G7TAD9 ), NSAR_BACCR (Q81IL5 ), RHMD_AZOC5 (A8I5F1 ), RHMD_BURA4 (B1YMY4 ), RHMD_BURCA (Q1BGJ0 ), RHMD_BURCC (B1KAV6 ), RHMD_BURCH (A0KDV2 ), RHMD_BURCM (Q0BA70 ), RHMD_CALMQ (A8MA91 ), RHMD_DELAS (A9BQY2 ), RHMD_ECO27 (B7UFQ9 ), RHMD_ECO45 (B7MG14 ), RHMD_ECO57 (Q8XE07 ), RHMD_ECO81 (B7MXS8 ), RHMD_ECOBW (C4ZU89 ), RHMD_ECODH (B1X8W0 ), RHMD_ECOHS (A8A2B3 ), RHMD_ECOK1 (A1AD99 ), RHMD_ECOL5 (Q0TFJ5 ), RHMD_ECOL6 (Q8FFM8 ), RHMD_ECOLC (B1IXU0 ), RHMD_ECOLI (P77215 ), RHMD_ECOSM (B1LLK1 ), RHMD_ECOUT (Q1R9G8 ), RHMD_KLEP3 (B5XNY1 ), RHMD_KLEP7 (A6TBU8 ), RHMD_PARP8 (B2JLI8 ), RHMD_PARPJ (B2TFM7 ), RHMD_PARXL (Q13LW5 ), RHMD_POLSJ (Q12DF1 ), RHMD_SACEN (A4FLW9 ), RHMD_SALA4 (B5EZH0 ), RHMD_SALCH (Q57M62 ), RHMD_SALDC (B5FNT1 ), RHMD_SALEP (B5R264 ), RHMD_SALG2 (B5RCB6 ), RHMD_SALHS (B4TBF8 ), RHMD_SALNS (B4SYW3 ), RHMD_SALPA (Q5PIM9 ), RHMD_SALPB (A9N5C2 ), RHMD_SALPC (C0Q077 ), RHMD_SALPK (B5BCQ4 ), RHMD_SALSV (B4TPH4 ), RHMD_SALTI (Q8Z548 ), RHMD_SHIBS (Q31Z80 ), RHMD_SHISS (Q3YZV9 ), RHMD_TOLAT (C4LDK0 ), RHMD_VEREI (A1WFL2 ), TARD_BRADU (Q89FH0 ), TFDD2_CUPPJ (P42428 ), XEEP_FRAP2 (B0TZW0 ), XEEP_SULDN (Q30PM2 ), Y4701_DICDI (P0CC06 ), YITF_BACSU (O06741 )» more |
| PDB [Detailed view] |
38 PDB
1DTN; 1JPD; 1MDL; 1MDR; 1MNS; 1MRA; 1MUC; 1NU5; 2CHR; 2MNR; 2MUC; 2PP0; 2PP1; 2PP3; 3JVA; 3JW7; 3JZU; 3K1G; 3KUM; 3MUC; 3RIT; 3RO6; 3RR1; 3RRA; 3T6C; 3TW9; 3TWA; 3TWB; 3UXK; 3UXL; 4A35; 4E4F; 4FP1; 4HNC; 4IHC; 4IL2; 4M6U; 4X2P » more |
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission