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Entry: PS00909

General information about the entry

Entry name [info] MR_MLE_2
Accession [info] PS00909
Entry type [info] PATTERN
Date [info] 01-OCT-1993 CREATED;
01-JUL-1999 DATA UPDATE;
12-AUG-2020 INFO UPDATE.
PROSITE Doc. [info] PDOC00706

Name and characterization of the entry

Description [info] Mandelate racemase / muconate lactonizing enzyme family signature 2.
Pattern [info]
[LIVF]-x(2)-D-x-[NH]-x(7)-[ACL]-x(6)-[LIVMF]-x(7)-[LIVM]-E-[DENQ]-P.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2020_04 which contains 563'082 sequence entries.


Total number of hits 81 in 81 different sequences
Number of true positive hits 81 in 81 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 108
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 42.86 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Site [info] magnesium_manganese at position 3
Site [info] magnesium_manganese at position 12
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
81 sequences

AEEP_ECOLI  (P51981    ), CATB1_ACILW (O33946    ), CATB2_ACILW (O33949    ), 
CATB_ACIAD  (Q43931    ), CATB_PSEPU  (P08310    ), CATB_RHOOP  (P95608    ), 
CBNB_CUPNE  (P83763    ), CLCB_PSEPU  (P11452    ), DGD_PANAM   (D4GJ14    ), 
DGD_SALEP   (B5R541    ), DGD_SALVI   (B5QBD4    ), DGOD1_ECOSM (B1LPS5    ), 
DGOD2_ECOSM (B1LL17    ), DGOD_CROS8  (A7MN07    ), DGOD_ECO24  (A7ZTP7    ), 
DGOD_ECO45  (B7MGB3    ), DGOD_ECO55  (B7L836    ), DGOD_ECO7I  (B7NQZ2    ), 
DGOD_ECO81  (B7N1Z6    ), DGOD_ECO8A  (B7M4I1    ), DGOD_ECOBW  (C4ZYW9    ), 
DGOD_ECODH  (B1X9C1    ), DGOD_ECOHS  (A8A6F2    ), DGOD_ECOK1  (A1AHM7    ), 
DGOD_ECOL5  (Q0TB15    ), DGOD_ECOLC  (B1IYQ2    ), DGOD_ECOLI  (Q6BF17    ), 
DGOD_ECOLU  (B7NF09    ), DGOD_ECOSE  (B6I3S5    ), DGOD_ECOUT  (Q1R4P4    ), 
DGOD_ENT38  (A4W4R9    ), DGOD_ESCF3  (B7LK34    ), DGOD_KLEP3  (B5XW18    ), 
DGOD_KLEP7  (A6TFZ4    ), DGOD_PECAS  (Q6CYT9    ), DGOD_RALPJ  (B2UCA8    ), 
DGOD_RALSO  (Q8XVS8    ), DGOD_SALCH  (Q57I11    ), DGOD_SALDC  (B5FN00    ), 
DGOD_SALEP  (B5QUN9    ), DGOD_SALG2  (B5RFZ8    ), DGOD_SALHS  (B4TA81    ), 
DGOD_SALNS  (B4SY97    ), DGOD_SALPB  (A9MWL9    ), DGOD_SALPK  (B5BIK9    ), 
DGOD_SALTY  (Q8ZKZ1    ), DGOD_SERP5  (A8G7R4    ), DGOD_VARPS  (C5CZC3    ), 
DGOD_VEREI  (A1WPC7    ), DGOD_XANAC  (Q8PLN0    ), DGOD_XANC5  (Q3BUN6    ), 
DGOD_XANC8  (Q4UTT5    ), DGOD_XANCB  (B0RTW1    ), DGOD_XANCP  (Q8P9V1    ), 
DGOD_XANOM  (Q2P1Q3    ), DGOD_XANOP  (B2SV55    ), DMGD_DICP7  (C6CBG9    ), 
ENOF1_BOVIN (Q2KIA9    ), ENOF1_HUMAN (Q7L5Y1    ), ENOF1_PONAB (Q5RAT4    ), 
HYEP_ENTFA  (Q834W6    ), HYEP_FLABM  (C0BK17    ), HYEP_ROSLO  (F7ZLS5    ), 
IMAND_OCEGH (Q2CIN0    ), KRDE_METCA  (Q607C7    ), LGD1_HYPJE  (Q0QWS4    ), 
MAND_ECOL6  (Q8FHC7    ), MAND_ECOMS  (D8ADB5    ), MAND_ENT38  (A4WA78    ), 
MAND_ESCAT  (B1ELW6    ), MAND_PECCP  (C6D9S0    ), MAND_SALG2  (B5RAG0    ), 
MANR_PSEPU  (P11444    ), PHYLO_ARATH (Q15KI9    ), RSPA_ECOLI  (P38104    ), 
TAGAD_SALTY (Q8ZL58    ), TCBD_PSESQ  (P27099    ), TFDD1_CUPPJ (P05404    ), 
TFDD_DELAC  (Q9RNZ9    ), XAD_HALVD   (D4GP40    ), YIN2_STRAM  (P32426    )
» more

UniProtKB/Swiss-Prot
False negative sequences
108 sequences

AAEP_CYTH3  (Q11T61    ), ACI_VIBSJ   (H2IFX0    ), AEEP_BACSU  (O34508    ), 
AEEP_BACTN  (Q8A861    ), AEEP_CLOAB  (Q97MK4    ), AEEP_FRATN  (A0Q5S7    ), 
AEEP_THEMA  (Q9WXM1    ), AREP_HERA2  (A9B055    ), AXEP_FLAJ1  (A5FHW9    ), 
AXEP_MARSH  (A4AQI7    ), AXEP_PEDPL  (B9XEK4    ), AXEP_POPTR  (B9I2J6    ), 
C3HPD_LABAI (A0NXQ8    ), C3HPD_STAND (D7A0Y2    ), DGD_STRBB   (D7BPX0    ), 
DMGD_CHRSD  (Q1QT89    ), DMGD_HALED  (E1V4Y0    ), ENOF1_XENLA (Q6INX4    ), 
GAD_SACS2   (Q97U27    ), GAD_THETE   (Q704D2    ), GALRD_OCEIH (Q8EMJ9    ), 
GCI_AGRFC   (A9CEQ8    ), HPBD_PARDP  (A1B198    ), HPBD_SALBH  (Q0FPQ4    ), 
HYEP_GEOBB  (B5EFW2    ), IMAND_CATAD (C7PW26    ), IMAND_CLOB8 (A6M2W4    ), 
IMAND_CLOBW (A8RQK7    ), IMAND_CROTZ (C9Y5D5    ), IMAND_ENT38 (A4W7D6    ), 
IMAND_ENTCS (C9CN91    ), IMAND_PAESJ (C6CVY9    ), IMAND_PECAS (Q6DAR4    ), 
IMAND_PECCP (C6DI84    ), IMAND_PECPW (D0KC90    ), IMAND_PSECP (B8HCK2    ), 
IMAND_STRSH (B5GCP6    ), IMAND_VIBBS (A5KUH4    ), IMAND_VIBH1 (D0X4R4    ), 
IMND1_ENTGE (C8ZZN2    ), IMND1_VIBCR (C9NUM5    ), IMND2_ENTGE (C9A1P5    ), 
IMND2_VIBCY (A6AMN2    ), KRDE_DESAH  (C0QM06    ), MAND1_CAUSK (B0T0B1    ), 
MAND1_CAUVC (Q9A4L8    ), MAND2_CAUSK (B0T4L2    ), MAND2_CAUVC (Q9AAR4    ), 
MAND_CELJU  (B3PDB1    ), MAND_MARMS  (A6VRA1    ), MAND_NOVAD  (A4XF23    ), 
MAND_SPHSS  (Q1NAJ2    ), MAND_SPHWW  (A5V6Z0    ), MAND_STRS3  (D9UNB2    ), 
MAND_XANOB  (G7TAD9    ), NSAR_BACCR  (Q81IL5    ), RHMD_AZOC5  (A8I5F1    ), 
RHMD_BURA4  (B1YMY4    ), RHMD_BURCA  (Q1BGJ0    ), RHMD_BURCC  (B1KAV6    ), 
RHMD_BURCH  (A0KDV2    ), RHMD_BURCM  (Q0BA70    ), RHMD_CALMQ  (A8MA91    ), 
RHMD_DELAS  (A9BQY2    ), RHMD_ECO27  (B7UFQ9    ), RHMD_ECO45  (B7MG14    ), 
RHMD_ECO57  (Q8XE07    ), RHMD_ECO81  (B7MXS8    ), RHMD_ECOBW  (C4ZU89    ), 
RHMD_ECODH  (B1X8W0    ), RHMD_ECOHS  (A8A2B3    ), RHMD_ECOK1  (A1AD99    ), 
RHMD_ECOL5  (Q0TFJ5    ), RHMD_ECOL6  (Q8FFM8    ), RHMD_ECOLC  (B1IXU0    ), 
RHMD_ECOLI  (P77215    ), RHMD_ECOSM  (B1LLK1    ), RHMD_ECOUT  (Q1R9G8    ), 
RHMD_KLEP3  (B5XNY1    ), RHMD_KLEP7  (A6TBU8    ), RHMD_PARP8  (B2JLI8    ), 
RHMD_PARPJ  (B2TFM7    ), RHMD_PARXL  (Q13LW5    ), RHMD_POLSJ  (Q12DF1    ), 
RHMD_SACEN  (A4FLW9    ), RHMD_SALA4  (B5EZH0    ), RHMD_SALCH  (Q57M62    ), 
RHMD_SALDC  (B5FNT1    ), RHMD_SALEP  (B5R264    ), RHMD_SALG2  (B5RCB6    ), 
RHMD_SALHS  (B4TBF8    ), RHMD_SALNS  (B4SYW3    ), RHMD_SALPA  (Q5PIM9    ), 
RHMD_SALPB  (A9N5C2    ), RHMD_SALPC  (C0Q077    ), RHMD_SALPK  (B5BCQ4    ), 
RHMD_SALSV  (B4TPH4    ), RHMD_SALTI  (Q8Z548    ), RHMD_SHIBS  (Q31Z80    ), 
RHMD_SHISS  (Q3YZV9    ), RHMD_TOLAT  (C4LDK0    ), RHMD_VEREI  (A1WFL2    ), 
TARD_BRADU  (Q89FH0    ), TFDD2_CUPPJ (P42428    ), XEEP_FRAP2  (B0TZW0    ), 
XEEP_SULDN  (Q30PM2    ), Y4701_DICDI (P0CC06    ), YITF_BACSU  (O06741    )
» more

PDB
[Detailed view]
38 PDB

1DTN; 1JPD; 1MDL; 1MDR; 1MNS; 1MRA; 1MUC; 1NU5; 2CHR; 2MNR; 2MUC; 2PP0; 2PP1; 2PP3; 3JVA; 3JW7; 3JZU; 3K1G; 3KUM; 3MUC; 3RIT; 3RO6; 3RR1; 3RRA; 3T6C; 3TW9; 3TWA; 3TWB; 3UXK; 3UXL; 4A35; 4E4F; 4FP1; 4HNC; 4IHC; 4IL2; 4M6U; 4X2P
» more

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