PROSITE entry PS00910
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PURL: https://purl.expasy.org/prosite/signature/PS00910
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General information about the entry
| Entry name [info] | UPF0029 |
| Accession [info] | PS00910 |
| Entry type [info] | PATTERN |
| Date [info] |
01-OCT-1993 CREATED;
01-OCT-1993 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00707 |
Name and characterization of the entry
| Description [info] | Uncharacterized protein family UPF0029 signature. |
| Pattern [info] |
G-x(2)-[LIVM](2)-x(2)-[LIVM]-x(4)-[LIVM]-x(5)-[LIVM](2)-x-R-[FYW](2)-G- G-x(2)-[LIVM]-G. |
Numerical results [info]
| Total number of hits | 13 in 13 different sequences |
| Number of true positive hits | 13 in 13 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 6 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 68.42 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
13 sequences
IMPCT_BOVIN (A7YY45), IMPCT_DANRE (Q642J4), IMPCT_HUMAN (Q9P2X3), IMPCT_MOUSE (O55091), IMPCT_RABIT (Q5GFD8), IMPCT_RAT (Q5GFD9), IMPTB_XENTR (A9UMG5), Y722_HAEIN (P44842), YD177_YEAST (Q12257), YIGZ_ECOLI (P27862), YIH1_YEAST (P25637), YPOL_THETH (P32438), YVYE_BACSU (P32437)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
6 sequences
IMPCT_CAEEL (Q9XWF4), IMPCT_DICDI (Q54JW9), IMPCT_XENLA (Q9W625), IMPTA_XENTR (Q5M8G6), YIH1_SCHPO (O13997), YO29_SCHPO (O60090)» more |
| PDB [Detailed view] |
4 PDB
pdb_00001vi7; pdb_00006bqi; pdb_00006u1l; pdb_00006u1o |