PROSITE entry PS00913
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General information about the entry
Entry name [info] | ADH_IRON_1 |
Accession [info] | PS00913 |
Entry type [info] | PATTERN |
Date [info] |
01-OCT-1993 CREATED;
01-JUL-1998 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00059 |
Name and characterization of the entry
Description [info] | Iron-containing alcohol dehydrogenases signature 1. |
Pattern [info] |
[STALIV]-[LIVF]-x-[DE]-x(6,7)-P-x(4)-[ALIV]-x-[GST]-x(2)-D-[TAIVM]- [LIVMF]-x(4)-E. |
Numerical results [info]
Total number of hits | 50 in 50 different sequences |
Number of true positive hits | 42 in 42 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 8 in 8 different sequences |
Number of false negative sequences | 30 |
Number of 'partial' sequences | 1 |
Precision (true positives / (true positives + false positives)) | 84.00 % |
Recall (true positives / (true positives + false negatives)) | 58.33 % |
Comments [info]
Taxonomic range [info] | Archaea, Eukaryotes, Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
42 sequences
4HBDH_CUPNE (Q59104), ADH1_CLOSA (P13604), ADH1_GEOTN (A4IP64), ADH2_ECOLI (P37686), ADH2_ENTH1 (Q24803), ADH2_GEOTN (A4ISB9), ADH2_ZYMMA (F8DVL8), ADH2_ZYMMO (P0DJA2), ADH4_SCHPO (Q09669), ADH4_YEAS7 (A6ZTT5), ADH4_YEAST (P10127), ADHA_CLOAB (Q04944), ADHB_CLOAB (Q04945), ADHE_CLOAB (P33744), ADHE_ECO57 (P0A9Q8), ADHE_ECOLI (P0A9Q7), ADHE_STRP2 (A0A0H2ZM56), ADHE_STRPN (A0A0H2URT2), DHAT_CITFR (P45513), DHAT_KLEPN (Q59477), EUTG_ECOLI (P76553), EUTG_SALTY (P41795), FUCO_ECO57 (P0A9S2), FUCO_ECOLI (P0A9S1), GBSB_BACSU (P71017), GLD1_SCHPO (O13702), GLDA_CITFR (P45511), GLDA_ECOL6 (P0A9S6), GLDA_ECOLI (P0A9S5), GLDA_GEOSE (P32816), GLDA_PSEPU (P50173), GLDA_THEMA (Q9WYQ4), HCXA_ECOLI (P45579), HOT_CAEBR (A8WTJ7), HOT_CAEEL (Q9U2M4), MEDH_BACMT (P31005), PDUQ_CITFR (B1VB76), PDUQ_SALTY (Q9XDN0), SARD_BILW3 (E5Y946), YQHD_ECOLI (Q46856), YUGJ_BACSU (O05239), YUGK_BACSU (O05240)» more
|
UniProtKB/Swiss-Prot False negative sequences |
30 sequences
4HBDH_CLOK5 (P38945), ADH3_ENTH1 (Q24857), ADHA_THEET (Q9F282), ADH_THEBA (A0A0S1X9S7), CLCE_PSEAI (O87612), CLCE_PSEKB (O30847), GRAC_RHIS5 (A1IIX4), HOT_AEDAE (Q17EN4), HOT_ANOGA (Q7Q547), HOT_BOVIN (A6QP15), HOT_DICDI (Q54GJ7), HOT_DROME (Q9W265), HOT_DROPS (Q28XT3), HOT_HUMAN (Q8IWW8), HOT_MOUSE (Q8R0N6), HOT_PONAB (Q5RF11), HOT_RAT (Q4QQW3), HOT_XENLA (Q08B39), HOT_XENTR (Q6P371), KDNB_SHEON (Q8EEB0), LINF_SPHIU (Q5W9E3), MACA1_RHOOP (O84992), MNO_RHOER (Q53062), PHPC_STRVT (D9XF45), TCBF_PSESQ (P27101), TFDF1_CUPPJ (P27137), TFDF2_CUPPJ (P94135), TFDF_DELAC (Q93T12), TFTE_BURCE (Q45072), Y1167_SYNY3 (P74246)» more |
UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
MACA2_RHOOP (P56870) |
UniProtKB/Swiss-Prot False positive sequences |
8 sequences
CARB_ARATH (Q42601), CARB_ORYSJ (B9EXM2), DNLJ_AGRRK (B9JH39), DNLJ_RHIE6 (B3PTU7), DNLJ_RHIEC (Q2K6D3), DNLJ_RHIL3 (Q1ME47), DNLJ_RHILW (B5ZWH9), SETD2_HUMAN (Q9BYW2)» more |
PDB [Detailed view] |
31 PDB
1JPU; 1JQ5; 1JQA; 1KQ3; 1OJ7; 1RRM; 1TA9; 2BI4; 2BL4; 3BFJ; 3OWO; 3OX4; 4QGS; 5BR4; 5ZXL; 6AHC; 6SCG; 6SCI; 6TQH; 6TQM; 7BVP; 7QLG; 7QLQ; 7QLS; 7QNF; 7QNH; 7QNI; 7QNJ; 7R0P; 7R3D; 7R5T » more |