PROSITE entry PS00935

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General information about the entry

Entry name [info]	GLYOXALASE_I_2
Accession [info]	PS00935
Entry type [info]	PATTERN
Date [info]	01-JUN-1994 CREATED; 01-JUL-1999 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC00720

Name and characterization of the entry

Description [info]	Glyoxalase I signature 2.
Pattern [info]	G-[NTKQ]-x(0,5)-[GA]-[LVFY]-[GH]-H-[IVF]-[CGA]-x-[STAGLE]-x(2)-[DNC].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.

Total number of hits	30 in 28 different sequences
Number of true positive hits	29 in 27 different sequences
Number of 'unknown' hits	0
Number of false positive hits	1
Number of false negative sequences	5
Number of 'partial' sequences	1

Precision (true positives / (true positives + false positives))	96.67 %
Recall (true positives / (true positives + false negatives))	85.29 %

Comments [info]

Taxonomic range [info]	Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info]	2
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot True positive sequences	27 sequences GLX1_ARATH (O65398), LGUL_ARATH (Q8H0V3), LGUL_BRAJU (O04885), LGUL_BRAOG (Q39366), LGUL_CICAR (O49818), LGUL_ECO57 (P0AC82), LGUL_ECOLI (P0AC81), LGUL_HAEIN (P44638), LGUL_HUMAN (Q04760), LGUL_MACFA (Q4R5F2), LGUL_MOUSE (Q9CPU0), LGUL_NEIMA (P0A0T2), LGUL_NEIMB (P0A0T3), LGUL_PSEAE (Q9HU72), LGUL_PSEPU (P16635), LGUL_RAT(Q6P7Q4), LGUL_SALTI (P0A1Q3), LGUL_SALTY (P0A1Q2), LGUL_SCHPO (Q09751), LGUL_SHIFL (P0AC83), LGUL_SOLLC (Q42891), LGUL_SOYBN (Q9ZS21), LGUL_SYNY3 (Q55595), LGUL_VIBCH (Q9KT93), LGUL_VIBPA (P46235), LGUL_YEAST (P50107), YQJC_BACSU (P54540) » more Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits: [Clustal format, color, condensed view] [Clustal format, color] [Clustal format, plain text] [Fasta format] Retrieve the sequence logo from the alignment
UniProtKB/Swiss-Prot False negative sequences	5 sequences LGUC_ARATH (Q8W593), LGUL_ORYSJ (Q948T6), YRAH_BACSU (O07918), YURT_BACSU (O32161), YWBC_BACSU (P39586) » more
UniProtKB/Swiss-Prot 'Partial' sequences	1 sequence LGUL_PINST (P84719)
UniProtKB/Swiss-Prot False positive sequences	1 sequence NKD1_HUMAN (Q969G9)
PDB [Detailed view]	23 PDB 1BH5; 1F9Z; 1FA5; 1FA6; 1FA7; 1FA8; 1FRO; 1QIN; 1QIP; 2ZA0; 3VW9; 3W0T; 3W0U; 4KYH; 4KYK; 4OPN; 4PV5; 4X2A; 6L0U; 7WSZ; 7WT0; 7WT1; 7WT2 » more