PROSITE entry PS00938
View entry in original PROSITE format
View entry in raw text format (no links)
View entry auxiliary file in raw text format (no links)
Direct ScanProsite submission
General information about the entry
| PURL [info] | https://purl.expasy.org/prosite/signature/PS00938 |
| Entry name [info] | IF3 |
| Accession [info] | PS00938 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-DEC-2001 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00723 |
Name and characterization of the entry
| Description [info] | Initiation factor 3 signature. |
| Pattern [info] |
[KR]-[LIVM](2)-[DN]-[FY]-[GSTN]-[KR]-[LIVMFYS]-x-[FY]-[DEQTAHI]-x(2)- [KRQ]. |
Numerical results [info]
| Total number of hits | 261 in 261 different sequences |
| Number of true positive hits | 253 in 253 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 8 in 8 different sequences |
| Number of false negative sequences | 61 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 96.93 % |
| Recall (true positives / (true positives + false negatives)) | 80.57 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
253 sequences
IF32_ARATH (O82234), IF34_ARATH (Q94B52), IF3B_NOSS1 (Q8YUH8), IF3C_CYAM1 (Q85G77), IF3C_EUGGR (P36177), IF3C_GALSU (Q9MS97), IF3C_GRATL (Q6B8N5), IF3C_NEOYE (Q1XDQ6), IF3C_PORPU (P51231), IF3_ACAM1 (B0CD77), IF3_ALISL (B6EN33), IF3_AQUAE (O67653), IF3_AROAE (Q5P7X6), IF3_AZOC5 (A8HWL0), IF3_BACAN (Q81L15), IF3_BACC1 (Q72ZG2), IF3_BACCR (Q812P6), IF3_BACCZ (Q633M1), IF3_BACFN (Q5LEQ5), IF3_BACFR (Q64VP1), IF3_BACSU (P55872), IF3_BACTN (Q8AAP1), IF3_BLOFL (Q7VR70), IF3_BORAP (Q0SNX3), IF3_BORBR (Q7WKF6), IF3_BORBU (O51208), IF3_BORBZ (B7J1C3), IF3_BORDL (B5RL16), IF3_BORGP (Q662H4), IF3_BORHD (B2RZQ1), IF3_BORPA (Q7W911), IF3_BORPE (Q7VY63), IF3_BORRA (B5RR09), IF3_BORT9 (A1QYY5), IF3_BUCA5 (B8D8S7), IF3_BUCAI (P57226), IF3_BUCAP (P46243), IF3_BUCAT (B8D731), IF3_BUCBP (P59446), IF3_CALS4 (Q8R9C2), IF3_CAMC1 (A7ZAZ8), IF3_CAMC5 (A7GVZ3), IF3_CAMFF (A0RRI8), IF3_CAMJ8 (A8FK08), IF3_CAMJD (A7H1S1), IF3_CAMJE (Q9PIS2), IF3_CAMJJ (A1VXT6), IF3_CAMJR (Q5HWW2), IF3_CAMLR (B9KEB2), IF3_CAUSK (B0SY03), IF3_CAUVC (Q9A9D9), IF3_CAUVN (B8H312), IF3_CERS4 (O33567), IF3_CHLCV (Q822B2), IF3_CHLMU (Q9PL86), IF3_CHLTR (O84840), IF3_CHRVO (Q7NYC5), IF3_CLOAB (Q97GK5), IF3_CLOPE (Q8XJ67), IF3_CLOTE (Q891T1), IF3_COREF (Q8FTQ2), IF3_CORGB (A4QDY1), IF3_CORGL (Q8NQP8), IF3_COXBU (Q83C11), IF3_DEIDV (C1D0V9), IF3_DEIGD (Q1IY80), IF3_DEIRA (Q9RSN7), IF3_ECO27 (B7USA1), IF3_ECO57 (P0A709), IF3_ECOBW (C4ZYI0), IF3_ECOL6 (P0A708), IF3_ECOLC (B1IPL0), IF3_ECOLI (P0A707), IF3_ELUMP (B2KB83), IF3_ENDTX (B1GZU2), IF3_ENTFA (Q837C9), IF3_FUSNN (Q8R5Y3), IF3_GEOMG (Q39VS8), IF3_GEOSE (P03000), IF3_GEOSL (Q74D03), IF3_GLOVI (Q7NJS6), IF3_HAEDU (Q7VKS0), IF3_HAEIN (P43814), IF3_HALH5 (Q9K867), IF3_HAMD5 (C4K777), IF3_HELHP (Q7VJ08), IF3_HELPJ (Q9ZMV2), IF3_HELPY (P55973), IF3_HYPNA (Q0C535), IF3_IDILO (Q5QYN5), IF3_KLEPN (P33318), IF3_LACJO (Q74IC4), IF3_LACLA (Q9CEJ7), IF3_LACPL (Q88WU8), IF3_LEGPA (Q5X1H4), IF3_LEGPL (Q5WT83), IF3_LEPBA (B0SCH4), IF3_LEPBJ (Q04U56), IF3_LEPBL (Q04ZG9), IF3_LEPBP (B0SKZ7), IF3_LEPIC (Q72PK8), IF3_LEPIN (Q8F6Q9), IF3_LISIN (P0A3L2), IF3_LISMF (Q71YN3), IF3_LISMO (P0A3L1), IF3_MACCJ (B9E784), IF3_MESFL (Q6F1S8), IF3_MICAN (B0JKQ1), IF3_MYCBO (P65136), IF3_MYCCT (Q2SSS1), IF3_MYCFE (Q05426), IF3_MYCGE (P47438), IF3_MYCLE (Q9CC22), IF3_MYCMS (Q6MU22), IF3_MYCPN (P78024), IF3_MYCPU (Q98QV2), IF3_MYCTO (P9WKJ8), IF3_MYCTU (P9WKJ9), IF3_MYXXA (P48516), IF3_MYXXD (Q1DES4), IF3_NAUPA (B9L5U8), IF3_NEIG1 (Q5F9U3), IF3_NEIMA (P65137), IF3_NEIMB (P65138), IF3_NEIMF (A1KSY3), IF3_NITSB (A6Q167), IF3_NITV2 (Q728R6), IF3_NITV4 (A1VBB5), IF3_NITV9 (B8DPN1), IF3_NOSP7 (B2IY66), IF3_NOSS1 (Q8YNE3), IF3_OCEIH (Q8EPF5), IF3_PARL1 (A7HPJ7), IF3_PARMW (Q7UA08), IF3_PASMU (Q9CN42), IF3_PECAS (Q6D4G9), IF3_PECCP (C6DFY7), IF3_PHEZH (B4R9C1), IF3_PHOV8 (A6L7J6), IF3_PICP2 (B1XM04), IF3_PROHU (P33319), IF3_PROM0 (A3PFC5), IF3_PROM1 (A2C586), IF3_PROM2 (A8G7E2), IF3_PROM3 (A2C600), IF3_PROM4 (A9BD81), IF3_PROM5 (A2BZ21), IF3_PROM9 (Q318A5), IF3_PROMA (Q7V9N2), IF3_PROMH (B4ETK7), IF3_PROMM (Q7TV76), IF3_PROMP (Q7TU24), IF3_PROMS (A2BTL8), IF3_PROMT (Q46IH3), IF3_PSEF5 (Q4KEW3), IF3_PSEFS (C3JZN6), IF3_PSEPH (Q9X6E7), IF3_PSESM (P0A132), IF3_PSESY (P0A133), IF3_PSET1 (Q3IL80), IF3_RALN1 (Q8XZ28), IF3_RHOBA (Q7UJ17), IF3_RICCN (Q92HK6), IF3_RICFE (Q4ULG2), IF3_RICPR (Q9ZD19), IF3_RICTY (Q68WK5), IF3_RIPO1 (B7JYL4), IF3_RUEPO (Q5LQ58), IF3_SALPA (Q5PH88), IF3_SALTI (Q8Z6I3), IF3_SALTY (P33321), IF3_SERMA (P33320), IF3_SHEB2 (B8EES7), IF3_SHEB8 (A6WNH1), IF3_SHEON (Q8EER8), IF3_SHEWM (B1KG60), IF3_SHIFL (Q83L38), IF3_SHOC1 (Q5WEI6), IF3_SORC5 (A9F8E5), IF3_STAA3 (Q2FG56), IF3_STAA8 (Q2FXP9), IF3_STAAB (Q2YTA9), IF3_STAAC (Q5HF92), IF3_STAAE (A6QHL4), IF3_STAAM (P65139), IF3_STAAN (P65140), IF3_STAAR (Q6GG25), IF3_STAAS (Q6G8P5), IF3_STAAW (P65141), IF3_STACT (B9DNC6), IF3_STAEQ (Q5HNM3), IF3_STAES (Q8CS75), IF3_STAS1 (Q49YB2), IF3_STRA1 (Q3K0C8), IF3_STRA3 (P65142), IF3_STRA5 (P65143), IF3_STRE4 (C0M8S9), IF3_STREM (B4U2J9), IF3_STRMU (Q8DV22), IF3_STRP1 (P65146), IF3_STRP2 (Q04KW9), IF3_STRP3 (P0DB86), IF3_STRP4 (B5E478), IF3_STRP6 (Q5XCU2), IF3_STRP7 (C1C6T6), IF3_STRP8 (P65148), IF3_STRPB (Q1JCH2), IF3_STRPC (Q1JMF0), IF3_STRPD (Q1JHJ7), IF3_STRPF (Q1J7B8), IF3_STRPG (A2RF84), IF3_STRPI (B1IBB9), IF3_STRPJ (B8ZP56), IF3_STRPM (Q48U94), IF3_STRPN (P65144), IF3_STRPQ (P0DB87), IF3_STRPZ (B5XKT8), IF3_STRR6 (P65145), IF3_STRS7 (C0MGM0), IF3_STRT1 (Q5LZL7), IF3_STRT2 (Q5M470), IF3_STRTD (Q03KI9), IF3_STRU0 (B9DU40), IF3_STRZJ (C1CDV4), IF3_STRZP (C1CK40), IF3_STRZT (C1CRU1), IF3_SULDN (Q30UI3), IF3_SYNPW (A5GI06), IF3_SYNR3 (A5GQ34), IF3_SYNS3 (Q0IDZ5), IF3_SYNS9 (Q3B0M2), IF3_SYNSC (Q3ANG8), IF3_SYNY3 (P72874), IF3_THEMA (Q9X1S6), IF3_THEVB (Q8DIG8), IF3_TREPA (O83822), IF3_TREPS (B2S488), IF3_TRIV2 (Q3MBH6), IF3_TROW8 (Q83HH0), IF3_TROWT (Q83GT2), IF3_UREPA (Q9PQR4), IF3_VIBCH (O68844), IF3_WIGBR (Q8D3B9), IF3_WOLSU (Q7M9L9), IF3_XANAC (Q8PJE2), IF3_XANCP (Q8P7Z3), IF3_XANP2 (A7IGN8), IF3_XYLFA (Q9PFE1), IF3_XYLFT (Q87AB3), IF3_YERE8 (A1JMK2), IF3_YERP3 (A7FHG2), IF3_YERPE (Q8ZDW6), IF3_YERPS (Q669Z1)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
61 sequences
IF31_ARATH (Q6NLP2), IF3C_CYACA (Q9TLX8), IF3M_BOVIN (Q32KZ1), IF3M_HUMAN (Q9H2K0), IF3M_MOUSE (Q9CZD5), IF3_ACIAD (Q6F861), IF3_ACIBS (B0VV99), IF3_ACIBY (B0V5P1), IF3_ANAD2 (B8J830), IF3_ANADE (Q2IJB8), IF3_ANADF (A7HBI7), IF3_ANASK (B4UAN5), IF3_AZOPC (B6YQ94), IF3_AZOVI (Q8RQ01), IF3_BARBK (A1UUD5), IF3_BARHE (Q6G570), IF3_BARQU (Q6G1I3), IF3_BART1 (A9ILC8), IF3_BRADU (Q89WH7), IF3_BRUA4 (A6WX21), IF3_BRUAB (P0A3L0), IF3_BRUME (P0A3K8), IF3_BRUSU (P0A3K9), IF3_CAMHC (A7I108), IF3_CHLCH (Q3APW0), IF3_CHLL2 (B3EEC0), IF3_CHLL3 (Q3B6L9), IF3_CHLP8 (B3QRM3), IF3_CHLPB (B3EKG8), IF3_CHLPD (A1BJB3), IF3_CHLPM (A4SCK3), IF3_CHLPN (Q9Z6R9), IF3_CHLTE (Q8KAM9), IF3_EHRCR (Q2GI91), IF3_EHRRG (Q5FGP0), IF3_EHRRW (Q5H9Z3), IF3_METC4 (B7KV98), IF3_METI4 (B3DYI1), IF3_METPB (B1ZGB8), IF3_METRJ (B1M6P9), IF3_METS4 (B0UP34), IF3_PARD8 (A6L9S3), IF3_PORG3 (B2RJD7), IF3_PORGI (Q7MVQ6), IF3_PROA2 (B4S3D1), IF3_PSEAE (Q9I0A0), IF3_PSEE4 (Q1IC14), IF3_PSEP1 (A5W5E0), IF3_PSEPG (B0KKR7), IF3_PSEPK (Q88K26), IF3_PSEPW (B1J6U5), IF3_RHILO (Q98CP5), IF3_RHILW (B5ZXR7), IF3_RHIME (Q92ST3), IF3_SOLUE (Q02D92), IF3_STRAW (Q828D2), IF3_STRCO (O88060), IF3_THET2 (Q9ACJ8), IF3_THET8 (Q5SKU2), IF3_THETH (Q70YI5), IF3_ZYMMO (Q5NL80)» more |
| UniProtKB/Swiss-Prot False positive sequences |
8 sequences
T2R20_GORGO (Q646A0), T2R20_HUMAN (P59543), T2R20_PANPA (Q646E3), T2R20_PANTR (Q646C2), T2R20_PAPHA (Q646G1), T2R20_PONPY (Q645V6), T2R36_HUMAN (P0DTE0), TRM13_DICDI (Q54BD5)» more |
| PDB [Detailed view] |
5 PDB
1TIF; 5ME0; 5ME1; 6O6D; 8JSG |