PROSITE entry PS00938
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General information about the entry
| Entry name [info] | IF3 |
| Accession [info] | PS00938 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-DEC-2001 DATA UPDATE; 13-SEP-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00723 |
Name and characterization of the entry
| Description [info] | Initiation factor 3 signature. |
| Pattern [info] |
[KR]-[LIVM](2)-[DN]-[FY]-[GSTN]-[KR]-[LIVMFYS]-x-[FY]-[DEQTAHI]-x(2)- [KRQ]. |
Numerical results [info]
| Total number of hits | 261 in 261 different sequences |
| Number of true positive hits | 253 in 253 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 8 in 8 different sequences |
| Number of false negative sequences | 61 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 96.93 % |
| Recall (true positives / (true positives + false negatives)) | 80.57 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
253 sequences
IF32_ARATH (O82234), IF34_ARATH (Q94B52), IF3B_NOSS1 (Q8YUH8), IF3C_CYAM1 (Q85G77), IF3C_EUGGR (P36177), IF3C_GALSU (Q9MS97), IF3C_GRATL (Q6B8N5), IF3C_NEOYE (Q1XDQ6), IF3C_PORPU (P51231), IF3_ACAM1 (B0CD77), IF3_ALISL (B6EN33), IF3_ALKCK (Q5WEI6), IF3_AQUAE (O67653), IF3_AROAE (Q5P7X6), IF3_AZOC5 (A8HWL0), IF3_BACAN (Q81L15), IF3_BACC1 (Q72ZG2), IF3_BACCR (Q812P6), IF3_BACCZ (Q633M1), IF3_BACFN (Q5LEQ5), IF3_BACFR (Q64VP1), IF3_BACSU (P55872), IF3_BACTN (Q8AAP1), IF3_BLOFL (Q7VR70), IF3_BORAP (Q0SNX3), IF3_BORBR (Q7WKF6), IF3_BORBU (O51208), IF3_BORBZ (B7J1C3), IF3_BORDL (B5RL16), IF3_BORGP (Q662H4), IF3_BORHD (B2RZQ1), IF3_BORPA (Q7W911), IF3_BORPE (Q7VY63), IF3_BORRA (B5RR09), IF3_BORT9 (A1QYY5), IF3_BUCA5 (B8D8S7), IF3_BUCAI (P57226), IF3_BUCAP (P46243), IF3_BUCAT (B8D731), IF3_BUCBP (P59446), IF3_CALS4 (Q8R9C2), IF3_CAMC1 (A7ZAZ8), IF3_CAMC5 (A7GVZ3), IF3_CAMFF (A0RRI8), IF3_CAMJ8 (A8FK08), IF3_CAMJD (A7H1S1), IF3_CAMJE (Q9PIS2), IF3_CAMJJ (A1VXT6), IF3_CAMJR (Q5HWW2), IF3_CAMLR (B9KEB2), IF3_CAUSK (B0SY03), IF3_CAUVC (Q9A9D9), IF3_CAUVN (B8H312), IF3_CERS4 (O33567), IF3_CHLCV (Q822B2), IF3_CHLMU (Q9PL86), IF3_CHLTR (O84840), IF3_CHRVO (Q7NYC5), IF3_CLOAB (Q97GK5), IF3_CLOPE (Q8XJ67), IF3_CLOTE (Q891T1), IF3_COREF (Q8FTQ2), IF3_CORGB (A4QDY1), IF3_CORGL (Q8NQP8), IF3_COXBU (Q83C11), IF3_DEIDV (C1D0V9), IF3_DEIGD (Q1IY80), IF3_DEIRA (Q9RSN7), IF3_DESVH (Q728R6), IF3_DESVM (B8DPN1), IF3_DESVV (A1VBB5), IF3_ECO27 (B7USA1), IF3_ECO57 (P0A709), IF3_ECOBW (C4ZYI0), IF3_ECOL6 (P0A708), IF3_ECOLC (B1IPL0), IF3_ECOLI (P0A707), IF3_ELUMP (B2KB83), IF3_ENDTX (B1GZU2), IF3_ENTFA (Q837C9), IF3_FUSNN (Q8R5Y3), IF3_GEOMG (Q39VS8), IF3_GEOSE (P03000), IF3_GEOSL (Q74D03), IF3_GLOVI (Q7NJS6), IF3_HAEDU (Q7VKS0), IF3_HAEIN (P43814), IF3_HALH5 (Q9K867), IF3_HAMD5 (C4K777), IF3_HELHP (Q7VJ08), IF3_HELPJ (Q9ZMV2), IF3_HELPY (P55973), IF3_HYPNA (Q0C535), IF3_IDILO (Q5QYN5), IF3_KLEPN (P33318), IF3_LACJO (Q74IC4), IF3_LACLA (Q9CEJ7), IF3_LACPL (Q88WU8), IF3_LEGPA (Q5X1H4), IF3_LEGPL (Q5WT83), IF3_LEPBA (B0SCH4), IF3_LEPBJ (Q04U56), IF3_LEPBL (Q04ZG9), IF3_LEPBP (B0SKZ7), IF3_LEPIC (Q72PK8), IF3_LEPIN (Q8F6Q9), IF3_LISIN (P0A3L2), IF3_LISMF (Q71YN3), IF3_LISMO (P0A3L1), IF3_MACCJ (B9E784), IF3_MESFL (Q6F1S8), IF3_MICAN (B0JKQ1), IF3_MYCBO (P65136), IF3_MYCCT (Q2SSS1), IF3_MYCFE (Q05426), IF3_MYCGE (P47438), IF3_MYCLE (Q9CC22), IF3_MYCMS (Q6MU22), IF3_MYCPN (P78024), IF3_MYCPU (Q98QV2), IF3_MYCTO (P9WKJ8), IF3_MYCTU (P9WKJ9), IF3_MYXXA (P48516), IF3_MYXXD (Q1DES4), IF3_NAUPA (B9L5U8), IF3_NEIG1 (Q5F9U3), IF3_NEIMA (P65137), IF3_NEIMB (P65138), IF3_NEIMF (A1KSY3), IF3_NITSB (A6Q167), IF3_NOSP7 (B2IY66), IF3_NOSS1 (Q8YNE3), IF3_OCEIH (Q8EPF5), IF3_PARL1 (A7HPJ7), IF3_PARMW (Q7UA08), IF3_PASMU (Q9CN42), IF3_PECAS (Q6D4G9), IF3_PECCP (C6DFY7), IF3_PHEZH (B4R9C1), IF3_PHOV8 (A6L7J6), IF3_PROHU (P33319), IF3_PROM0 (A3PFC5), IF3_PROM1 (A2C586), IF3_PROM2 (A8G7E2), IF3_PROM3 (A2C600), IF3_PROM4 (A9BD81), IF3_PROM5 (A2BZ21), IF3_PROM9 (Q318A5), IF3_PROMA (Q7V9N2), IF3_PROMH (B4ETK7), IF3_PROMM (Q7TV76), IF3_PROMP (Q7TU24), IF3_PROMS (A2BTL8), IF3_PROMT (Q46IH3), IF3_PSEF5 (Q4KEW3), IF3_PSEFS (C3JZN6), IF3_PSEPH (Q9X6E7), IF3_PSESM (P0A132), IF3_PSESY (P0A133), IF3_PSET1 (Q3IL80), IF3_RALN1 (Q8XZ28), IF3_RHOBA (Q7UJ17), IF3_RICCN (Q92HK6), IF3_RICFE (Q4ULG2), IF3_RICPR (Q9ZD19), IF3_RICTY (Q68WK5), IF3_RIPO1 (B7JYL4), IF3_RUEPO (Q5LQ58), IF3_SALPA (Q5PH88), IF3_SALTI (Q8Z6I3), IF3_SALTY (P33321), IF3_SERMA (P33320), IF3_SHEB2 (B8EES7), IF3_SHEB8 (A6WNH1), IF3_SHEON (Q8EER8), IF3_SHEWM (B1KG60), IF3_SHIFL (Q83L38), IF3_SORC5 (A9F8E5), IF3_STAA3 (Q2FG56), IF3_STAA8 (Q2FXP9), IF3_STAAB (Q2YTA9), IF3_STAAC (Q5HF92), IF3_STAAE (A6QHL4), IF3_STAAM (P65139), IF3_STAAN (P65140), IF3_STAAR (Q6GG25), IF3_STAAS (Q6G8P5), IF3_STAAW (P65141), IF3_STACT (B9DNC6), IF3_STAEQ (Q5HNM3), IF3_STAES (Q8CS75), IF3_STAS1 (Q49YB2), IF3_STRA1 (Q3K0C8), IF3_STRA3 (P65142), IF3_STRA5 (P65143), IF3_STRE4 (C0M8S9), IF3_STREM (B4U2J9), IF3_STRMU (Q8DV22), IF3_STRP1 (P65146), IF3_STRP2 (Q04KW9), IF3_STRP3 (P0DB86), IF3_STRP4 (B5E478), IF3_STRP6 (Q5XCU2), IF3_STRP7 (C1C6T6), IF3_STRP8 (P65148), IF3_STRPB (Q1JCH2), IF3_STRPC (Q1JMF0), IF3_STRPD (Q1JHJ7), IF3_STRPF (Q1J7B8), IF3_STRPG (A2RF84), IF3_STRPI (B1IBB9), IF3_STRPJ (B8ZP56), IF3_STRPM (Q48U94), IF3_STRPN (P65144), IF3_STRPQ (P0DB87), IF3_STRPZ (B5XKT8), IF3_STRR6 (P65145), IF3_STRS7 (C0MGM0), IF3_STRT1 (Q5LZL7), IF3_STRT2 (Q5M470), IF3_STRTD (Q03KI9), IF3_STRU0 (B9DU40), IF3_STRZJ (C1CDV4), IF3_STRZP (C1CK40), IF3_STRZT (C1CRU1), IF3_SULDN (Q30UI3), IF3_SYNP2 (B1XM04), IF3_SYNPW (A5GI06), IF3_SYNR3 (A5GQ34), IF3_SYNS3 (Q0IDZ5), IF3_SYNS9 (Q3B0M2), IF3_SYNSC (Q3ANG8), IF3_SYNY3 (P72874), IF3_THEMA (Q9X1S6), IF3_THEVB (Q8DIG8), IF3_TREPA (O83822), IF3_TREPS (B2S488), IF3_TRIV2 (Q3MBH6), IF3_TROW8 (Q83HH0), IF3_TROWT (Q83GT2), IF3_UREPA (Q9PQR4), IF3_VIBCH (O68844), IF3_WIGBR (Q8D3B9), IF3_WOLSU (Q7M9L9), IF3_XANAC (Q8PJE2), IF3_XANCP (Q8P7Z3), IF3_XANP2 (A7IGN8), IF3_XYLFA (Q9PFE1), IF3_XYLFT (Q87AB3), IF3_YERE8 (A1JMK2), IF3_YERP3 (A7FHG2), IF3_YERPE (Q8ZDW6), IF3_YERPS (Q669Z1)» more
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| UniProtKB/Swiss-Prot False negative sequences |
61 sequences
IF31_ARATH (Q6NLP2), IF3C_CYACA (Q9TLX8), IF3M_BOVIN (Q32KZ1), IF3M_HUMAN (Q9H2K0), IF3M_MOUSE (Q9CZD5), IF3_ACIAD (Q6F861), IF3_ACIBS (B0VV99), IF3_ACIBY (B0V5P1), IF3_ANAD2 (B8J830), IF3_ANADE (Q2IJB8), IF3_ANADF (A7HBI7), IF3_ANASK (B4UAN5), IF3_AZOPC (B6YQ94), IF3_AZOVI (Q8RQ01), IF3_BARBK (A1UUD5), IF3_BARHE (Q6G570), IF3_BARQU (Q6G1I3), IF3_BART1 (A9ILC8), IF3_BRADU (Q89WH7), IF3_BRUA4 (A6WX21), IF3_BRUAB (P0A3L0), IF3_BRUME (P0A3K8), IF3_BRUSU (P0A3K9), IF3_CAMHC (A7I108), IF3_CHLCH (Q3APW0), IF3_CHLL2 (B3EEC0), IF3_CHLL3 (Q3B6L9), IF3_CHLP8 (B3QRM3), IF3_CHLPB (B3EKG8), IF3_CHLPD (A1BJB3), IF3_CHLPM (A4SCK3), IF3_CHLPN (Q9Z6R9), IF3_CHLTE (Q8KAM9), IF3_EHRCR (Q2GI91), IF3_EHRRG (Q5FGP0), IF3_EHRRW (Q5H9Z3), IF3_METC4 (B7KV98), IF3_METI4 (B3DYI1), IF3_METPB (B1ZGB8), IF3_METRJ (B1M6P9), IF3_METS4 (B0UP34), IF3_PARD8 (A6L9S3), IF3_PORG3 (B2RJD7), IF3_PORGI (Q7MVQ6), IF3_PROA2 (B4S3D1), IF3_PSEAE (Q9I0A0), IF3_PSEE4 (Q1IC14), IF3_PSEP1 (A5W5E0), IF3_PSEPG (B0KKR7), IF3_PSEPK (Q88K26), IF3_PSEPW (B1J6U5), IF3_RHILO (Q98CP5), IF3_RHILW (B5ZXR7), IF3_RHIME (Q92ST3), IF3_SOLUE (Q02D92), IF3_STRAW (Q828D2), IF3_STRCO (O88060), IF3_THET2 (Q9ACJ8), IF3_THET8 (Q5SKU2), IF3_THETH (Q70YI5), IF3_ZYMMO (Q5NL80)» more |
| UniProtKB/Swiss-Prot False positive sequences |
8 sequences
T2R20_GORGO (Q646A0), T2R20_HUMAN (P59543), T2R20_PANPA (Q646E3), T2R20_PANTR (Q646C2), T2R20_PAPHA (Q646G1), T2R20_PONPY (Q645V6), T2R36_HUMAN (P0DTE0), TRM13_DICDI (Q54BD5)» more |
| PDB [Detailed view] |
4 PDB
1TIF; 5ME0; 5ME1; 6O6D |