PROSITE entry PS00947
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General information about the entry
| Entry name [info] | CATHELICIDINS_2 |
| Accession [info] | PS00947 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00729 |
Name and characterization of the entry
| Description [info] | Cathelicidins signature 2. |
| Pattern [info] |
F-x-[LIVM]-K-E-T-x-C-x(10)-C-x-F-[KR]-[KE]. |
Numerical results [info]
| Total number of hits | 49 in 49 different sequences |
| Number of true positive hits | 49 in 49 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 7 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 87.50 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes |
| Maximum number of repetitions [info] | 1 |
| Site [info] | disulfide at position 8 |
| Site [info] | disulfide at position 10 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
49 sequences
CAMP_ATEFR (Q1KLY8), CAMP_ATEFU (Q1KLY7), CAMP_CALJA (Q1KLY4), CAMP_CEBCA (Q1KLY5), CAMP_CHLAE (Q1KLY6), CAMP_GORGO (Q1KLY3), CAMP_HUMAN (P49913), CAMP_HYLML (Q1KLX8), CAMP_MACFA (Q1KLX7), CAMP_MACMU (Q9GLV5), CAMP_MACTO (Q1KLX6), CAMP_MOUSE (P51437), CAMP_NOMCO (Q1KLY0), CAMP_NOMGA (Q1KLY2), CAMP_NOMLE (Q1KLX9), CAMP_PANTR (Q1KLX1), CAMP_PAPPA (Q1KLX3), CAMP_PONPY (Q1KLX2), CAMP_SAGOE (Q1KLX0), CAMP_TRACR (Q1KLX5), CAMP_TRAOB (Q1KLX4), CAP18_RABIT (P25230), CTHL1_BOVIN (P22226), CTHL1_SHEEP (P54230), CTHL2_BOVIN (P19660), CTHL2_CAPHI (P82018), CTHL2_SHEEP (P79362), CTHL3_BOVIN (P19661), CTHL3_SHEEP (P50415), CTHL4_BOVIN (P33046), CTHL5_BOVIN (P54229), CTHL6_BOVIN (P54228), CTHL7_BOVIN (P56425), ICTL_PIG(P15175), P15A_RABIT (P26202), P15B_RABIT (P26203), PF11_PIG(P51524), PF12_PIG(P51525), PG1_PIG (P32194), PG2_PIG (P32195), PG3_PIG (P32196), PG4_PIG (P49933), PG5_PIG (P49934), PMP23_PIG (P49930), PMP36_PIG (P49931), PMP37_PIG (P49932), PR39_PIG(P80054), SC51_SHEEP (P49928), SC52_SHEEP (P49929)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
7 sequences
CAMP_BUNFA (B6D434), CAMP_NAJAT (B6S2X0), CAMP_OPHHA (B6S2X2), CTHB1_CHICK (Q5F378), CTHL1_CHICK (Q6QLQ5), CTHL2_CHICK (Q2IAL7), CTHL3_CHICK (Q2IAL6)» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CTHL3_CAPHI (P85170) |
| PDB [Detailed view] |
5 PDB
1KWI; 1LXE; 1N5H; 1N5P; 4EYC |