PROSITE entry PS00949
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General information about the entry
| Entry name [info] | AUTOINDUCER_SYNTH_1 |
| Accession [info] | PS00949 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00731 |
Name and characterization of the entry
| Description [info] | Autoinducer synthase family signature. |
| Pattern [info] |
[LMFYA]-R-x(3)-F-x(2)-[KRQ]-x(2)-W-x-[LIVM]-x(6,9)-E-x-D-x-[FY]-D. |
Numerical results [info]
| Total number of hits | 25 in 25 different sequences |
| Number of true positive hits | 25 in 25 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 96.15 % |
Comments [info]
| Taxonomic range [info] | Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
25 sequences
AHYI_AERHY (Q44058), ASAI_AERSA (P70774), CARI_PECCC (P33880), EAGI_ENTAG (P33881), ECHI_DICCH (Q46968), ESAI_PANSE (P54656), EXPI_DICD3 (Q47187), EXPI_PECPM (P33882), LASI_PSEAE (P33883), LUXI_ALIFS (P12747), LUXJ_ALIF1 (P35328), PHZI_PSECL (Q51522), PHZI_PSEFL (Q51785), PSYI_PSEAJ (P52990), RAII_RHIET (O54451), RHLI_PSEAE (P54291), SOLI_RALN1 (P58584), SOLI_RALSL (O30920), SWRI_SERLI (P52989), TRAI_AGRFC (P33907), TRAI_RHIRD (P33904), TRAI_SINFN (P55394), VANI_VIBAN (P74945), YENI_YEREN (P52988), YUKI_YERRU (O87970)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
BJAI_BRADU (Q89VI2) |
| PDB [Detailed view] |
3 PDB
1K4J; 1KZF; 1RO5 |