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PROSITE entry PS00949


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General information about the entry

Entry name [info] AUTOINDUCER_SYNTH_1
Accession [info] PS00949
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
13-SEP-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00731

Name and characterization of the entry

Description [info] Autoinducer synthase family signature.
Pattern [info] 
[LMFYA]-R-x(3)-F-x(2)-[KRQ]-x(2)-W-x-[LIVM]-x(6,9)-E-x-D-x-[FY]-D.

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_04 which contains 570'157 sequence entries.


Total number of hits 25 in 25 different sequences
Number of true positive hits 25 in 25 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 96.15 %

Comments [info]

Taxonomic range [info] Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 25 sequences 

AHYI_AERHY  (Q44058), ASAI_AERSA  (P70774), CARI_PECCC  (P33880), 

EAGI_ENTAG  (P33881), ECHI_DICCH  (Q46968), ESAI_PANSE  (P54656), 
EXPI_DICD3  (Q47187), EXPI_PECPM  (P33882), LASI_PSEAE  (P33883), 
LUXI_ALIFS  (P12747), LUXJ_ALIF1  (P35328), PHZI_PSECL  (Q51522), 
PHZI_PSEFL  (Q51785), PSYI_PSEAJ  (P52990), RAII_RHIET  (O54451), 
RHLI_PSEAE  (P54291), SOLI_RALN1  (P58584), SOLI_RALSL  (O30920), 
SWRI_SERLI  (P52989), TRAI_AGRFC  (P33907), TRAI_RHIRD  (P33904), 
TRAI_SINFN  (P55394), VANI_VIBAN  (P74945), YENI_YEREN  (P52988), 
YUKI_YERRU  (O87970)
» more

UniProtKB/Swiss-Prot
False negative sequences		 1 sequence 

BJAI_BRADU  (Q89VI2)


				
	

	

		PDB
[Detailed view]		
		
			3 PDB
			


			1K4J; 1KZF; 1RO5