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PROSITE entry PS00950


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General information about the entry

Entry name [info] BACTERIAL_OPSIN_1
Accession [info] PS00950
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
08-NOV-2023 INFO UPDATE.
PROSITE Doc. [info] PDOC00291

Name and characterization of the entry

Description [info] Bacterial rhodopsins signature 1.
Pattern [info] 
R-Y-x-[DT]-W-x-[LIVMF]-[ST]-[TV]-P-[LIVM]-[LIVMNQ]-[LIVM].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2023_05 which contains 570'420 sequence entries.


Total number of hits 44 in 44 different sequences
Number of true positive hits 44 in 44 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 0
Number of 'partial' sequences 1
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 100.00 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes, Prokaryotes (Bacteria)
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 44 sequences 

BAC3_HALVA  (Q48334), BACH_HALHM  (P33970), BACH_HALHP  (Q48315), 

BACH_HALHS  (Q48314), BACH_HALMA  (Q5V1N0), BACH_HALS3  (B0R2U4), 
BACH_HALS4  (O93741), BACH_HALSA  (P0DMH7), BACH_HALSD  (O93742), 
BACH_HALSS  (P33742), BACH_HALVA  (P94853), BACH_NATPH  (P15647), 
BACR1_HALEZ (P69051), BACR1_HALMA (Q5UXY6), BACR1_HALSS (P69052), 
BACR1_HALWC (G0LFX8), BACR1_HALWD (Q18DH8), BACR2_HALMA (Q5V0R5), 
BACR2_HALS2 (P29563), BACR3_HALSD (P96787), BACRM_HALWD (Q18DH5), 
BACR_HALAR  (Q57101), BACR_HALHM  (P33969), BACR_HALHP  (P33971), 
BACR_HALHS  (P33972), BACR_HALS4  (O93740), BACR_HALSA  (P02945), 
BACR_HALSR  (Q53496), BACR_HALVA  (P94854), BACS1_HALMA (Q5UXM9), 
BACS1_HALS3 (B0R633), BACS1_HALSA (P0DMH8), BACS1_HALSS (P33743), 
BACS2_HALMA (Q5V5V3), BACS2_HALSA (P71411), BACS2_HALVA (P42197), 
BACS2_NATPH (P42196), BACS_HALSD  (O93743), CARO_GIBF5  (S0ELR6), 
CARO_GIBFU  (Q70LL3), NOP1_NEUCR  (Q9UW81), PRRB_PRB02  (Q9AFF7), 
PRRG_PRB01  (Q9F7P4), PRRG_UNKP   (Q6J4G7)
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UniProtKB/Swiss-Prot
'Partial' sequences		 1 sequence 

BACH_HALAR  (Q53461)


				
	

	

		PDB
[Detailed view]		
		
			199 PDB
			


			1AP9; 1AT9; 1BM1; 1BRD; 1BRR; 1BRX; 1C3W; 1C8R; 1C8S; 1CWQ; 1DZE; 1E0P; 
			
				1E12; 1F4Z; 1F50; 1FBB; 1FBK; 1GU8; 1GUE; 1H2S; 1H68; 1IW6; 1IW9; 1IXF; 
				1JGJ; 1KG8; 1KG9; 1KGB; 1KME; 1L0M; 1M0K; 1M0L; 1M0M; 1O0A; 1P8H; 1P8I; 
				1P8U; 1PXR; 1PXS; 1PY6; 1Q5I; 1QHJ; 1QKO; 1QKP; 1QM8; 1R2N; 1R84; 1S51; 
				1S52; 1S53; 1S54; 1TN0; 1TN5; 1UAZ; 1UCQ; 1VGO; 1VJM; 1X0I; 1X0K; 1X0S; 
				1XJI; 2AT9; 2BRD; 2EI4; 2F93; 2F95; 2I1X; 2I20; 2I21; 2JAF; 2JAG; 2L6X; 
				2NTU; 2NTW; 2WJK; 2WJL; 2Z55; 2ZFE; 2ZZL; 3COC; 3HAN; 3HAP; 3HAQ; 3HAR; 
				3HAS; 3MBV; 3NS0; 3NSB; 3QAP; 3QBG; 3QBI; 3QBK; 3QBL; 3QDC; 3T45; 3UTV; 
				3UTW; 3UTX; 3UTY; 3VVK; 3WQJ; 4FPD; 4HWL; 4HYX; 4JR8; 4L35; 4MD1; 4MD2; 
				4OV0; 4PXK; 4QI1; 4QID; 4X31; 4X32; 4XXJ; 5A44; 5A45; 5AHY; 5AHZ; 5B34; 
				5B35; 5B6V; 5B6W; 5B6X; 5B6Y; 5B6Z; 5BR2; 5BR5; 5G36; 5H2H; 5H2I; 5H2J; 
				5H2K; 5H2L; 5H2M; 5H2N; 5H2O; 5H2P; 5ITC; 5ITE; 5J7A; 5JJE; 5JJF; 5JJJ; 
				5JJN; 5KKH; 5VN7; 5VN9; 5ZIL; 5ZIM; 5ZIN; 6G7H; 6G7I; 6G7J; 6G7K; 6G7L; 
				6GA1; 6GA2; 6GA3; 6GA4; 6GA5; 6GA6; 6GA7; 6GA8; 6GA9; 6GAA; 6GAB; 6GAC; 
				6GAD; 6GAE; 6GAF; 6GAG; 6GAH; 6GAI; 6GUX; 6GUY; 6GUZ; 6RMK; 6RNJ; 6RPH; 
				6RQO; 6RQP; 6S63; 6S6C; 7B03; 7PNC; 7Q35; 7Q38; 7Q88; 7VSO; 7XJC; 7XJD; 
				7XJE; 7Z09; 7Z0A; 7Z0C; 7Z0D; 7Z0E; 7ZY3
			
			

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