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PROSITE entry PS00953
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General information about the entry
| Entry name [info] | GLYCOSYL_HYDROL_F25_1 |
| Accession [info] | PS00953 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE; 29-MAY-2024 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00737 |
| Associated ProRule [info] | PRU10065 |
Name and characterization of the entry
| Description [info] | Glycosyl hydrolases family 25 active site signature. |
| Pattern [info] |
D-[LIVM]-x(3)-[NQ]-[PGE]-x(9,15)-[GR]-x(4)-[LIVMFY](2)-K-x-[ST]-E-[GS]- x(2)-[FYL]-x-[DN]. |
Numerical results [info]
| Total number of hits | 11 in 11 different sequences |
| Number of true positive hits | 11 in 11 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 1 |
| Number of 'partial' sequences | 0 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 91.67 % |
Comments [info]
| Taxonomic range [info] | Bacteriophages, Eukaryotes, Prokaryotes (Bacteria) |
| Maximum number of repetitions [info] | 1 |
| Site [info] | active_site at position 1 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
11 sequences
LYSM1_STRGL (P25310), LYS_BPCP1 (P15057), LYS_BPCP7 (P19385), LYS_BPCP9 (P19386), LYS_BPMV1 (P33486), LYS_CHASP (P00721), LYS_CLOAB (P34020), LYS_CLOPE (P26836), YEGX_ECO57 (Q8X7H0), YEGX_ECOL6 (Q8FFY2), YEGX_ECOLI (P76421)» more
|
| UniProtKB/Swiss-Prot False negative sequences |
1 sequence
LYS1_ENTH1 (Q27650) |
| PDB [Detailed view] |
7 PDB
1H09; 1JFX; 1OBA; 2IXU; 2IXV; 2J8F; 2J8G |