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PROSITE entry PS00959


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General information about the entry

Entry name [info] HISTONE_H3_2
Accession [info] PS00959
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-NOV-1997 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00287

Name and characterization of the entry

Description [info] Histone H3 signature 2.
Pattern [info] 
P-F-x-[RA]-L-[VA]-[KRQ]-[DEG]-[IV].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 184 in 184 different sequences
Number of true positive hits 184 in 184 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 11
Number of 'partial' sequences 20
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 94.36 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 184 sequences 

CENH3_ORYSJ (Q6T367), CENPA_BOVIN (P49449), CENPA_CANAL (Q59LN9), 

CENPA_DANRE (Q803H4), CENPA_EREGS (Q75DE4), CENPA_HUMAN (P49450), 
CENPA_KAZSE (Q0MXD0), CENPA_KLULA (Q6CTI2), CENPA_KLUMA (Q0MTC0), 
CENPA_MILFA (Q0MXD1), CENPA_NEUCR (Q7RXR3), CENPA_XENLA (Q569M3), 
CENPA_XENTR (Q28I31), CENPA_YEAST (P36012), H31_ARATH   (P59226), 
H31_BOVIN   (P68432), H31_CANAL   (Q59VN2), H31_CHLRE   (Q42681), 
H31_DEBHA   (Q6BRZ5), H31_HUMAN   (P68431), H31_LODEL   (A5DWE2), 
H31_MOUSE   (P68433), H31_MUSPA   (Q6LBF0), H31_PICGU   (A5DFC5), 
H31_PICST   (A3LXD5), H31_RAT (Q6LED0), H31_SCHPO   (P09988), 
H31_STYLE   (P81195), H31_TETPY   (P69149), H31_TETTH   (P69150), 
H31_USTMA   (Q4P7J7), H32_ASPOF   (Q6LBE3), H32_BOVIN   (P84227), 
H32_BRANA   (Q6LCK1), H32_CAIMO   (P84230), H32_CHICK   (P84229), 
H32_CHLRE   (Q6LCW8), H32_CICIN   (Q5MYA4), H32_CRILO   (Q64400), 
H32_DANRE   (Q4QRF4), H32_ENCAL   (P08903), H32_EUPES   (Q71T45), 
H32_HUMAN   (Q71DI3), H32_ICTBU   (P84231), H32_LILLO   (Q402E1), 
H32_MAIZE   (P69246), H32_MEDSA   (P68429), H32_MOUSE   (P84228), 
H32_MUSPA   (Q6LBE8), H32_ONCMY   (P84234), H32_ONOVI   (P68430), 
H32_ORYSI   (A2Y533), H32_ORYSJ   (Q2RAD9), H32_PEA (P68427), 
H32_PETCR   (P69248), H32_PORAF   (P84232), H32_TOBAC   (Q76MV0), 
H32_USTMA   (Q4PB04), H32_WHEAT   (P68428), H32_XENLA   (P84233), 
H32_XENTR   (Q28D37), H331_CAEEL  (Q10453), H332_CAEEL  (Q9U281), 
H33A_DICDI  (O15819), H33A_DROME  (C0HL66), H33A_LILLO  (Q402E2), 
H33B_DICDI  (Q55BN9), H33B_DROME  (C0HL67), H33B_LILLO  (Q2Z2F4), 
H33C_DICDI  (Q55BP0), H33L1_CAEEL (Q27490), H33L2_CAEEL (Q27532), 
H33L3_CAEEL (Q27489), H33_ARATH   (P59169), H33_BOVIN   (Q5E9F8), 
H33_CANAL   (Q5ADQ0), H33_CAPAN   (Q6RUR1), H33_CHICK   (P84247), 
H33_CHLRE   (P50564), H33_DANRE   (Q6PI20), H33_DEBHA   (Q6BMU4), 
H33_DROHY   (P84250), H33_GOSHI   (Q71V89), H33_HORVU   (P06353), 
H33_HUMAN   (P84243), H33_LODEL   (A5E094), H33_LOLMU   (Q3C2E5), 
H33_LOLTE   (P69245), H33_MEDSA   (P69244), H33_MOUSE   (P84244), 
H33_ORYCO   (Q71U98), H33_ORYSI   (A2XHJ3), H33_ORYSJ   (Q0JCT1), 
H33_PICGU   (A5DG57), H33_PICST   (A3GHN6), H33_PIG (Q71LE2), 
H33_PINPS   (Q711T2), H33_PONAB   (Q5RCC9), H33_RABIT   (P84246), 
H33_RAT (P84245), H33_SCHPO   (P10651), H33_SPISO   (P84248), 
H33_STYLE   (P81197), H33_TETPY   (P15512), H33_TETTS   (P41353), 
H33_TOBAC   (Q76N23), H33_TRIPS   (Q8WSF1), H33_VITVI   (Q71H73), 
H33_XENLA   (Q6PI79), H33_XENTR   (Q6P823), H34_STYLE   (P81198), 
H34_TETTS   (Q22RG7), H35_STYLE   (P81199), H36_STYLE   (P81200), 
H37_HUMAN   (Q5TEC6), H37_STYLE   (P81201), H38_STYLE   (P81202), 
H39_STYLE   (P81196), H3CL_BOVIN  (Q3SZB8), H3C_BOVIN   (A5PK61), 
H3C_CAIMO   (P06902), H3C_HUMAN   (Q6NXT2), H3C_MOUSE   (P02301), 
H3C_XENLA   (P02302), H3L1_ARATH  (Q9FX60), H3L2_ARATH  (Q9FXI7), 
H3L3_ARATH  (Q9LR02), H3L4_ARATH  (Q9LXU8), H3L5_ARATH  (Q9FKQ3), 
H3Y1_HUMAN  (P0DPK2), H3Y2_HUMAN  (P0DPK5), H3_ACRFO(P22843), 
H3_AJECA(Q9P427), H3_ASPCL(A1CP80), H3_ASPFU(P61832), 
H3_ASPNC(A2QRR5), H3_ASPOR(Q2UCQ0), H3_ASPTN(Q0D0E8), 
H3_CAEEL(P08898), H3_CANGA(P61833), H3_CHAGB(Q6DL03), 
H3_CHITH(P84238), H3_COCIM(Q1E225), H3_CRYNB(P0CO05), 
H3_CRYNJ(P0CO04), H3_DERIM(P69071), H3_DROHY(P84236), 
H3_DROME(P02299), H3_EMENI(P23753), H3_ENTH1(Q06196), 
H3_EREGS(Q757N1), H3_EUPCR(P90543), H3_GIBZE(Q4IER8), 
H3_GRIJA(Q7XYZ0), H3_HYPJE(P61835), H3_KLULA(P61831), 
H3_LEIIN(P40285), H3_LYTPI(P69072), H3_MARPO(Q5DWI3), 
H3_MASBA(Q9U7D1), H3_MORAP(Q9HDN1), H3_NARPS(P80553), 
H3_NEOFI(A1D240), H3_NEUCR(P07041), H3_PARLI(P69073), 
H3_PHANO(Q0UY45), H3_PISBR(P69074), H3_PISOC(P69075), 
H3_PLADU(P84235), H3_PSAMI(P69076), H3_PYCHE(P69077), 
H3_PYRO7(A4RCX7), H3_SOLST(P69078), H3_STRDR(P69079), 
H3_STRPU(P06352), H3_TALFU(P61834), H3_TIGCA(P84237), 
H3_URECA(P84239), H3_VOLCA(P08437), H3_YARLI(Q6C0C4), 
H3_YEAST(P61830), H3_ZYGBA(P61836), HCP3L_CAEEL (P34440), 
HCP3_CAEEL  (P34470)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

CENPA_CHICK (Q6XXM1), CENPA_CRIGR (Q8R565), CENPA_MOUSE (O35216), 

CENPA_SCHPO (Q9Y812), CENPA_YARLI (Q6CER9), CID_DROME   (Q9V6Q2), 
H31T_HUMAN  (Q16695), H31_ENCCU   (Q8SS77), H3L_ENCCU   (Q8SQP3), 
H3V1_DICDI  (Q54F38), H3V2_DICDI  (Q54Z07)
» more

UniProtKB/Swiss-Prot
'Partial' sequences		 20 sequences 

H32_TETAM   (P69110), H32_TETAU   (P69111), H32_TETBO   (P17319), 

H32_TETCA   (P69112), H32_TETCU   (P69113), H32_TETEL   (P69114), 
H32_TETFU   (P69115), H32_TETHY   (P69116), H32_TETLE   (P69117), 
H32_TETMA   (P69118), H32_TETMI   (P69119), H32_TETNA   (P69120), 
H32_TETNI   (P69121), H32_TETPA   (P69123), H32_TETPI   (P69124), 
H32_TETPR   (P69122), H32_TETRO   (P69125), H32_TETSO   (P69126), 
H32_TETTR   (P69127), H3_PENVA(P83864)
» more

PDB
[Detailed view]		 661 PDB

1AOI; 1EQZ; 1F66; 1HIO; 1HQ3; 1ID3; 1KX3; 1KX4; 1KX5; 1M18; 1M19; 1M1A; 1P34; 1P3A; 1P3B; 1P3F; 1P3G; 1P3I; 1P3K; 1P3L; 1P3M; 1P3O; 1P3P; 1S32; 1TZY; 1U35; 1ZBB; 1ZLA; 2ARO; 2CV5; 2F8N; 2FJ7; 2HIO; 2HUE; 2IO5; 2L5A; 2LY8; 2NQB; 2NZD; 2PYO; 2YFV; 2YFW; 3AFA; 3AN2; 3AV1; 3AV2; 3AYW; 3AZE; 3AZF; 3AZG; 3AZH; 3AZI; 3AZJ; 3AZK; 3AZL; 3AZM; 3AZN; 3B6F; 3B6G; 3C1B; 3C1C; 3C9K; 3KUY; 3KWQ; 3KXB; 3LEL; 3LJA; 3LZ0; 3LZ1; 3MGP; 3MGQ; 3MGR; 3MGS; 3MNN; 3MVD; 3NQJ; 3NQU; 3O62; 3R45; 3REH; 3REI; 3REJ; 3REK; 3REL; 3TU4; 3UT9; 3UTA; 3UTB; 3W96; 3W97; 3W98; 3W99; 3WA9; 3WAA; 3WKJ; 3WTP; 3X1S; 3X1T; 3X1U; 3X1V; 4EO5; 4H9N; 4H9O; 4H9P; 4H9Q; 4H9R; 4H9S; 4HGA; 4J8U; 4J8V; 4J8W; 4J8X; 4JJN; 4KGC; 4KUD; 4LD9; 4QLC; 4R8P; 4UUZ; 4WU8; 4WU9; 4X23; 4XUJ; 4XZQ; 4YM5; 4YM6; 4YS3; 4Z2M; 4Z5T; 4Z66; 4ZBJ; 4ZUX; 5AV5; 5AV6; 5AV8; 5AV9; 5AVB; 5AVC; 5AY8; 5B0Y; 5B0Z; 5B1L; 5B1M; 5B24; 5B2I; 5B2J; 5B31; 5B32; 5B33; 5B40; 5BNV; 5BNX; 5BO0; 5BS7; 5BSA; 5C3I; 5CP6; 5CPI; 5CPJ; 5CPK; 5DNM; 5DNN; 5E5A; 5F99; 5GSE; 5GSU; 5GT0; 5GT3; 5GTC; 5HQ2; 5JA4; 5JRG; 5KDM; 5KGF; 5MLU; 5NL0; 5O9G; 5OMX; 5ONG; 5ONW; 5OXV; 5OY7; 5WCU; 5X0X; 5X0Y; 5X7X; 5XF3; 5XF4; 5XF5; 5XF6; 5XM0; 5XM1; 5Y0C; 5Y0D; 5Z23; 5Z30; 5Z3L; 5Z3O; 5Z3U; 5Z3V; 5ZBA; 5ZBB; 6A5L; 6A5O; 6A5P; 6A5R; 6A5T; 6A5U; 6BUZ; 6C0W; 6DZT; 6E0C; 6E0P; 6ESF; 6ESG; 6ESH; 6ESI; 6FML; 6FQ5; 6FQ6; 6FQ8; 6FTX; 6GEJ; 6GEN; 6HKT; 6HTS; 6I84; 6INQ; 6IPU; 6IQ4; 6IR9; 6IRO; 6IY2; 6IY3; 6J4W; 6J4X; 6J4Y; 6J4Z; 6J50; 6J51; 6JM9; 6JMA; 6JOU; 6JR0; 6JR1; 6JXD; 6K1I; 6K1J; 6K1K; 6KE9; 6KIU; 6KIV; 6KIW; 6KIX; 6KIZ; 6KVD; 6KW3; 6KW4; 6KW5; 6L49; 6L4A; 6L9H; 6L9Z; 6LA2; 6LA8; 6LA9; 6LAB; 6LE9; 6LER; 6LTJ; 6M3V; 6M44; 6M4D; 6M4G; 6M4H; 6MUO; 6MUP; 6NE3; 6NJ9; 6NN6; 6NOG; 6NQA; 6NZO; 6O1D; 6O22; 6O96; 6OM3; 6PA7; 6PWE; 6PWF; 6PWV; 6PWW; 6PWX; 6PX1; 6PX3; 6R0C; 6R1T; 6R1U; 6R25; 6R8Y; 6R8Z; 6R90; 6R91; 6R92; 6R93; 6R94; 6RNY; 6RYR; 6RYU; 6S01; 6SE0; 6SE6; 6SEE; 6SEF; 6SEG; 6T79; 6T7A; 6T7B; 6T7C; 6T7D; 6T90; 6T93; 6T9L; 6TDA; 6TEM; 6UH5; 6UPH; 6UPK; 6UPL; 6USJ; 6UXW; 6V2K; 6V92; 6VEN; 6VYP; 6W5I; 6W5M; 6W5N; 6WKR; 6WZ5; 6WZ9; 6X0N; 6X59; 6X5A; 6XJD; 6Y5D; 6Y5E; 6YN1; 6YOV; 6Z6P; 6ZHX; 6ZHY; 7A08; 7AT8; 7BWD; 7C0M; 7CCQ; 7CCR; 7CIZ; 7CJ0; 7COW; 7D1Z; 7D20; 7DBP; 7E8D; 7E8I; 7E9C; 7E9F; 7EA5; 7EA8; 7EG6; 7EGP; 7ENN; 7JO9; 7JOA; 7JZV; 7K5X; 7K5Y; 7K60; 7K61; 7K63; 7K6P; 7K6Q; 7K7G; 7KBD; 7KBE; 7KBF; 7KTQ; 7LYA; 7LYB; 7LYC; 7M1X; 7MBM; 7MBN; 7NKX; 7NKY; 7NL0; 7OH9; 7OHA; 7OHB; 7OHC; 7ON1; 7OTQ; 7PET; 7PEU; 7PEV; 7PEW; 7PEX; 7PEY; 7PEZ; 7PF0; 7PF2; 7PF3; 7PF4; 7PF5; 7PF6; 7PFA; 7PFC; 7PFD; 7PFE; 7PFF; 7PFT; 7PFU; 7PFV; 7PFW; 7PFX; 7PII; 7R5R; 7SCY; 7SCZ; 7SSA; 7SWY; 7TAN; 7TN2; 7U0G; 7U0I; 7U0J; 7U46; 7U47; 7U4D; 7U50; 7U51; 7U52; 7U53; 7UD5; 7UNC; 7UND; 7UV9; 7UX9; 7V1M; 7V6Q; 7V90; 7V96; 7V9C; 7V9J; 7V9K; 7V9S; 7VA4; 7VCQ; 7VDT; 7VDV; 7VVU; 7VVZ; 7VZ4; 7W9V; 7WBV; 7WBW; 7WBX; 7X57; 7X58; 7XAY; 7XCR; 7XCT; 7XD0; 7XD1; 7XFC; 7XFH; 7XFI; 7XFJ; 7XFL; 7XFM; 7XFN; 7XNP; 7XPX; 7XSE; 7XSX; 7XSZ; 7XT7; 7XTD; 7XTI; 7XVL; 7XVM; 7XX5; 7XX6; 7XZX; 7XZY; 7XZZ; 7Y00; 7Y5U; 7Y5V; 7Y5W; 7Y60; 7Y61; 7Y8R; 7YI1; 7YI4; 7YI5; 7YOZ; 7YQK; 7YRD; 7YRG; 7YWX; 7YYH; 7Z0O; 7ZI4; 7ZS9; 7ZSA; 7ZSB; 8AAG; 8ATF; 8AV6; 8BVW; 8BYQ; 8BZ1; 8CEO; 8CWW; 8CZE; 8DK5; 8DU4; 8ETT; 8ETV; 8EU2; 8EUE; 8EUJ; 8EVG; 8EVH; 8EVI; 8EVJ; 8F86; 8G57; 8G6Q; 8G6S; 8G86; 8G88; 8G8B; 8G8G; 8GPN; 8GRM; 8GRQ; 8GUI; 8GUJ; 8GUK; 8H0V; 8H0W; 8H1T; 8HAG; 8HAH; 8HAI; 8HAJ; 8HAK; 8HAL; 8HAM; 8HAN; 8HE5; 8IEG; 8IEJ; 8IHL; 8IQF; 8IQG; 8J6S; 8J6T; 8JH2; 8JH3; 8JH4; 8JHF; 8JHG; 8JL9; 8JLA; 8JLB; 8JLD; 8JND; 8JNE; 8JNF; 8KB5; 8OF4; 8OFF; 8OL1; 8OO7; 8OOA; 8OOP; 8OOS; 8OSJ; 8OSK; 8OSL; 8OTS; 8OTT; 8OW0; 8OW1; 8OX0; 8OX1; 8PC5; 8PC6; 8PEO; 8PEP; 8PKI; 8Q36; 8Q3E; 8Q3M; 8Q3X; 8QKT; 8RBX; 8SIY; 8SMW; 8SMX; 8SMY; 8SMZ; 8SN0; 8SN1; 8SN2; 8SN3; 8SN4; 8SN5; 8SN6; 8SN7; 8SN8; 8SN9; 8SNA; 8SPS; 8SPU; 8SVF; 8SYP; 8T3T; 8T3W; 8T3Y; 8T9F; 8T9H; 8THU; 8TXV; 8TXW; 8TXX; 8U13; 8U14; 8UPF; 8V4Y; 8V6V; 8V7L; 8WG5; 8WH5; 8WH8; 8WH9; 8WHA; 8WHB; 8X15; 8X19; 8X1C; 8XBT; 8XBU; 8XBW; 8YJF; 8YJM; 8YTI
» more