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Entry: PS00961 |
Entry name [info] | RIBOSOMAL_S28E |
Accession [info] | PS00961 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE; 10-FEB-2021 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00743 |
Description [info] | Ribosomal protein S28e signature. |
Pattern [info] |
E-[ST]-[EA]-R-E-A-[RK]-x-[LI]. |
Total number of hits | 55 in 55 different sequences |
Number of true positive hits | 52 in 52 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 3 in 3 different sequences |
Number of false negative sequences | 11 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 94.55 % |
Recall (true positives / (true positives + false negatives)) | 82.54 % |
Taxonomic range [info] | Archaea, Eukaryotes |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
UniProtKB/Swiss-Prot True positive sequences |
52 sequences
RS281_ARATH (Q9SR73 ), RS282_ARATH (P34789 ), RS28A_SCHPO (P0CT79 ), RS28A_YEAST (Q3E7X9 ), RS28B_SCHPO (P0CT80 ), RS28B_YEAST (P0C0X0 ), RS28_AERPE (Q9Y9A6 ), RS28_ARCFU (O29493 ), RS28_ASHGO (Q74ZD8 ), RS28_BOMMO (Q6PS50 ), RS28_BOVIN (Q56JX6 ), RS28_CAEEL (Q95Y04 ), RS28_CANGA (Q6FLC3 ), RS28_DANRE (Q6PBK3 ), RS28_DICDI (Q54MZ5 ), RS28_DROME (Q9W334 ), RS28_HUMAN (P62857 ), RS28_HYPBU (A2BK95 ), RS28_ICTPU (Q90YP3 ), RS28_KLULA (P33285 ), RS28_KLUMA (P33286 ), RS28_MAIZE (P46302 ), RS28_META3 (A6UT50 ), RS28_METJA (P54065 ), RS28_METKA (Q8TVE7 ), RS28_METM5 (A4FYI6 ), RS28_METM6 (A9A7E6 ), RS28_METM7 (A6VJU6 ), RS28_METMP (Q6LZI8 ), RS28_METS5 (A4YCQ2 ), RS28_METVS (A6USH4 ), RS28_MOUSE (P62858 ), RS28_NEUCR (Q7S6W5 ), RS28_PAPDA (Q6EV21 ), RS28_PICTO (Q6KZI6 ), RS28_PIG (Q6QAT1 ), RS28_PYRAB (P61029 ), RS28_PYRAE (Q8ZTA7 ), RS28_PYRAR (A4WLP1 ), RS28_PYRFU (Q8U159 ), RS28_PYRHO (P61030 ), RS28_PYRIL (A1RS33 ), RS28_PYRNV (B1Y9V2 ), RS28_RAT (P62859 ), RS28_SACS2 (Q980Q5 ), RS28_SPOFR (Q962Q2 ), RS28_SULAC (Q4JAV1 ), RS28_SULTO (Q975Z8 ), RS28_THEAC (P57711 ), RS28_THEKO (Q5JGR4 ), RS28_THEPD (A1RXH2 ), RS28_THEVO (Q97BK7 )» more
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UniProtKB/Swiss-Prot False negative sequences |
11 sequences
RS28_HALLT (B9LPY3 ), RS28_HALS3 (B0R500 ), RS28_HALSA (P57710 ), RS28_HALWD (Q18GA9 ), RS28_KORCO (B1L5N5 ), RS28_METAC (Q8TQL8 ), RS28_METMA (Q8PU75 ), RS28_METTH (O26356 ), RS28_NANEQ (P61031 ), RS28_NATPD (Q3IPM8 ), RS28_OSTOS (O61590 )» more |
UniProtKB/Swiss-Prot False positive sequences |
3 sequences
IF2_CYTH3 (Q11PK5 ), SYI_LACLA (Q9CEH8 ), TREH_MYCTU (P71741 ) |
PDB [Detailed view] |
179 PDB
1NY4; 3J6X; 3J6Y; 3J77; 3J78; 3J7P; 3J7R; 3J80; 3J81; 3JAM; 3JAP; 3JAQ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 4UG0; 4V4N; 4V6I; 4V6U; 4V6W; 4V6X; 4V7R; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5IT7; 5IT9; 5JB3; 5JBH; 5JPQ; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5LKS; 5LYB; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 5WYK; 6EK0; 6EML; 6FAI; 6FEC; 6FYX; 6FYY; 6G18; 6G4S; 6G4W; 6G51; 6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GSM; 6GSN; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 6LQU; 6LQV; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 6OM7; 6Q8Y; 6QZP; 6RBD; 6RBE; 6S47; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWE; 6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6UZ7; 6WDR; 6WOO; 6XA1; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YBS; 6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZMW; 6ZN5; 6ZOJ; 6ZOL; 6ZON; 6ZP4; 6ZQA; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 6ZQG; 6ZU9; 6ZVH; 6ZVI; 6ZVJ; 7A09; 7A1G; 7K5I » more |