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PROSITE entry PS00961


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General information about the entry

Entry name [info] RIBOSOMAL_S28E
Accession [info] PS00961
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00743

Name and characterization of the entry

Description [info] Ribosomal protein S28e signature.
Pattern [info] 
E-[ST]-[EA]-R-E-A-[RK]-x-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2024_04 which contains 571'864 sequence entries.


Total number of hits 57 in 57 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 83.08 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 54 sequences 

RS281_ARATH (Q9SR73), RS282_ARATH (P34789), RS28A_NEUCR (Q7S6W5), 

RS28A_SCHPO (P0CT79), RS28A_YEAST (Q3E7X9), RS28B_CANAL (A0A1D8PQN0), 
RS28B_SCHPO (P0CT80), RS28B_YEAST (P0C0X0), RS28_AERPE  (Q9Y9A6), 
RS28_ARCFU  (O29493), RS28_BOMMO  (Q6PS50), RS28_BOVIN  (Q56JX6), 
RS28_CAEEL  (Q95Y04), RS28_CANGA  (Q6FLC3), RS28_DANRE  (Q6PBK3), 
RS28_DICDI  (Q54MZ5), RS28_DROME  (Q9W334), RS28_EREGS  (Q74ZD8), 
RS28_HUMAN  (P62857), RS28_HYPBU  (A2BK95), RS28_ICTPU  (Q90YP3), 
RS28_KLULA  (P33285), RS28_KLUMA  (P33286), RS28_MAIZE  (P46302), 
RS28_META3  (A6UT50), RS28_METJA  (P54065), RS28_METKA  (Q8TVE7), 
RS28_METM5  (A4FYI6), RS28_METM6  (A9A7E6), RS28_METM7  (A6VJU6), 
RS28_METMP  (Q6LZI8), RS28_METS5  (A4YCQ2), RS28_METVS  (A6USH4), 
RS28_MOUSE  (P62858), RS28_PAPDA  (Q6EV21), RS28_PICTO  (Q6KZI6), 
RS28_PIG(Q6QAT1), RS28_PYRAB  (P61029), RS28_PYRAE  (Q8ZTA7), 
RS28_PYRAR  (A4WLP1), RS28_PYRFU  (Q8U159), RS28_PYRHO  (P61030), 
RS28_PYRIL  (A1RS33), RS28_PYRNV  (B1Y9V2), RS28_RABIT  (G1TIB4), 
RS28_RAT(P62859), RS28_SACS2  (Q980Q5), RS28_SPOFR  (Q962Q2), 
RS28_SULAC  (Q4JAV1), RS28_SULTO  (Q975Z8), RS28_THEAC  (P57711), 
RS28_THEKO  (Q5JGR4), RS28_THEPD  (A1RXH2), RS28_THEVO  (Q97BK7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

RS28_HALLT  (B9LPY3), RS28_HALS3  (B0R500), RS28_HALSA  (P57710), 

RS28_HALWD  (Q18GA9), RS28_KORCO  (B1L5N5), RS28_METAC  (Q8TQL8), 
RS28_METMA  (Q8PU75), RS28_METTH  (O26356), RS28_NANEQ  (P61031), 
RS28_NATPD  (Q3IPM8), RS28_OSTOS  (O61590)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

IF2_CYTH3   (Q11PK5), SYI_LACLA   (Q9CEH8), TREH_MYCTU  (P71741)


				
	

	

		PDB
[Detailed view]		
		
			369 PDB
			


			1NY4; 3J6X; 3J6Y; 3J77; 3J78; 3J7P; 3J7R; 3J80; 3J81; 3JAG; 3JAH; 3JAI; 
			
				3JAM; 3JAP; 4D5L; 4D61; 4KZX; 4KZY; 4KZZ; 4U3M; 4U3N; 4U3U; 4U4N; 4U4O; 
				4U4Q; 4U4R; 4U4U; 4U4Y; 4U4Z; 4U50; 4U51; 4U52; 4U53; 4U55; 4U56; 4U6F; 
				4UG0; 4V4N; 4V6I; 4V6U; 4V6W; 4V6X; 4V7R; 4V88; 4V8Y; 4V8Z; 4V92; 5A2Q; 
				5AJ0; 5DAT; 5DC3; 5DGE; 5DGF; 5DGV; 5FCI; 5FCJ; 5FLX; 5I4L; 5IT7; 5IT9; 
				5JB3; 5JBH; 5JPQ; 5JUO; 5JUP; 5JUS; 5JUT; 5JUU; 5K0Y; 5LKS; 5LYB; 5LZS; 
				5LZT; 5LZU; 5LZV; 5LZW; 5LZX; 5LZY; 5LZZ; 5M1J; 5MC6; 5MEI; 5NDG; 5NDV; 
				5NDW; 5OA3; 5OBM; 5ON6; 5T2C; 5TBW; 5TGA; 5TGM; 5TZS; 5VYC; 5WLC; 5WYJ; 
				5WYK; 6D90; 6D9J; 6EML; 6FAI; 6FEC; 6FYX; 6FYY; 6G18; 6G4S; 6G4W; 6G51; 
				6G53; 6G5H; 6G5I; 6GQ1; 6GQB; 6GQV; 6GSM; 6GSN; 6GZ3; 6HCF; 6HCJ; 6HCM; 
				6HCQ; 6HHQ; 6I7O; 6IP5; 6IP6; 6IP8; 6KE6; 6LQP; 6LQQ; 6LQR; 6LQS; 6LQT; 
				6LQU; 6LQV; 6MTB; 6MTC; 6MTD; 6MTE; 6OLE; 6OLF; 6OLG; 6OLI; 6OLZ; 6OM0; 
				6OM7; 6P4G; 6P4H; 6P5I; 6P5J; 6P5K; 6P5N; 6Q8Y; 6QZP; 6R5Q; 6R6G; 6R6P; 
				6R7Q; 6RBD; 6RBE; 6S47; 6SGC; 6SKF; 6SKG; 6SNT; 6SV4; 6SW9; 6SWC; 6SWE; 
				6T4Q; 6T7I; 6T7T; 6T83; 6TB3; 6TH6; 6TNU; 6UZ7; 6W2S; 6W2T; 6WDR; 6WOO; 
				6XA1; 6XU6; 6XU7; 6XU8; 6Y0G; 6Y2L; 6Y57; 6Y7C; 6YAL; 6YAM; 6YAN; 6YBS; 
				6Z6J; 6Z6K; 6Z6L; 6Z6M; 6Z6N; 6ZCE; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 
				6ZMW; 6ZN5; 6ZOJ; 6ZOL; 6ZON; 6ZP4; 6ZQA; 6ZQB; 6ZQC; 6ZQD; 6ZQE; 6ZQF; 
				6ZQG; 6ZU9; 6ZUO; 6ZV6; 6ZVH; 6ZVI; 6ZVJ; 6ZVK; 6ZXD; 6ZXE; 6ZXF; 6ZXG; 
				6ZXH; 7A01; 7A09; 7A1G; 7AJT; 7AJU; 7B7D; 7CPU; 7CPV; 7D4I; 7D5S; 7D5T; 
				7D63; 7JQB; 7JQC; 7K5I; 7LS1; 7LS2; 7MDZ; 7MPI; 7MPJ; 7MQ8; 7MQ9; 7MQA; 
				7N8B; 7NRC; 7NRD; 7NWG; 7NWH; 7NWI; 7O7Y; 7O7Z; 7O80; 7O81; 7OYA; 7OYB; 
				7OYD; 7PZY; 7Q08; 7Q0F; 7Q0P; 7Q0R; 7QP6; 7QP7; 7R4X; 7R81; 7SUK; 7SYG; 
				7SYH; 7SYI; 7SYJ; 7SYK; 7SYL; 7SYM; 7SYN; 7SYO; 7SYP; 7SYQ; 7SYR; 7SYS; 
				7SYT; 7SYU; 7SYV; 7SYW; 7SYX; 7TOQ; 7TOR; 7UCJ; 7UCK; 7WTT; 7WTU; 7WTV; 
				7WTW; 7WTX; 7WTZ; 7WU0; 7XNX; 7XNY; 7ZAG; 7ZAH; 7ZAI; 7ZHG; 7ZPQ; 7ZRS; 
				7ZUW; 7ZUX; 7ZW0; 8BHF; 8BQD; 8BQX; 8BTK; 8C00; 8C01; 8CAH; 8CAS; 8CBJ; 
				8CCS; 8CDL; 8CDR; 8CEH; 8CF5; 8CG8; 8CGN; 8CIV; 8CKU; 8CMJ; 8G5Y; 8G5Z; 
				8G60; 8G61; 8G6J; 8GLP; 8HKX; 8HKY; 8HKZ; 8HL1; 8HL2; 8HL3; 8HL4; 8HL5; 
				8I7J; 8IFD; 8IFE; 8JDJ; 8JDK; 8JDL; 8JDM; 8OZ0; 8P03; 8P09; 8P2K; 8PPK; 
				8PPL; 8SCB; 8T4S; 8WKP; 8WQ2; 8WQ4; 8Y0U; 8Y0W; 8Y0X
			
			

			» more