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We are deeply saddened by the passing of Amos Bairoch (1957–2025), the creator of PROSITE. We wish to dedicate our latest paper, published shortly before his death, to him. He will always be a source of inspiration to us.
Our deepest condolences go out to his family and friends, and to all those who had the privilege of working with him. Rest in peace, Amos. Your work will live on long after you are gone.
Amos Bairoch

PROSITE entry PS00961


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PURL: https://purl.expasy.org/prosite/signature/PS00961

Direct ScanProsite submission
General information about the entry

Entry name [info] RIBOSOMAL_S28E
Accession [info] PS00961
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00743

Name and characterization of the entry

Description [info] Ribosomal protein S28e signature.
Pattern [info]
E-[ST]-[EA]-R-E-A-[RK]-x-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_04 which contains 573'661 sequence entries.


Total number of hits 57 in 57 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 83.08 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
54 sequences

RS281_ARATH (Q9SR73), RS282_ARATH (P34789), RS28A_NEUCR (Q7S6W5), 
RS28A_SCHPO (P0CT79), RS28A_YEAST (Q3E7X9), RS28B_CANAL (A0A1D8PQN0), 
RS28B_SCHPO (P0CT80), RS28B_YEAST (P0C0X0), RS28_AERPE  (Q9Y9A6), 
RS28_ARCFU  (O29493), RS28_BOMMO  (Q6PS50), RS28_BOVIN  (Q56JX6), 
RS28_CAEEL  (Q95Y04), RS28_CANGA  (Q6FLC3), RS28_DANRE  (Q6PBK3), 
RS28_DICDI  (Q54MZ5), RS28_DROME  (Q9W334), RS28_EREGS  (Q74ZD8), 
RS28_HUMAN  (P62857), RS28_HYPBU  (A2BK95), RS28_ICTPU  (Q90YP3), 
RS28_KLULA  (P33285), RS28_KLUMA  (P33286), RS28_MAIZE  (P46302), 
RS28_META3  (A6UT50), RS28_METJA  (P54065), RS28_METKA  (Q8TVE7), 
RS28_METM5  (A4FYI6), RS28_METM6  (A9A7E6), RS28_METM7  (A6VJU6), 
RS28_METMP  (Q6LZI8), RS28_METS5  (A4YCQ2), RS28_METVS  (A6USH4), 
RS28_MOUSE  (P62858), RS28_PAPDA  (Q6EV21), RS28_PICTO  (Q6KZI6), 
RS28_PIG(Q6QAT1), RS28_PYRAB  (P61029), RS28_PYRAE  (Q8ZTA7), 
RS28_PYRAR  (A4WLP1), RS28_PYRFU  (Q8U159), RS28_PYRHO  (P61030), 
RS28_PYRIL  (A1RS33), RS28_PYRNV  (B1Y9V2), RS28_RABIT  (G1TIB4), 
RS28_RAT(P62859), RS28_SACS2  (Q980Q5), RS28_SPOFR  (Q962Q2), 
RS28_SULAC  (Q4JAV1), RS28_SULTO  (Q975Z8), RS28_THEAC  (P57711), 
RS28_THEKO  (Q5JGR4), RS28_THEPD  (A1RXH2), RS28_THEVO  (Q97BK7)
» more

UniProtKB/Swiss-Prot
False negative sequences
11 sequences

RS28_HALLT  (B9LPY3), RS28_HALS3  (B0R500), RS28_HALSA  (P57710), 
RS28_HALWD  (Q18GA9), RS28_KORCO  (B1L5N5), RS28_METAC  (Q8TQL8), 
RS28_METMA  (Q8PU75), RS28_METTH  (O26356), RS28_NANEQ  (P61031), 
RS28_NATPD  (Q3IPM8), RS28_OSTOS  (O61590)
» more

UniProtKB/Swiss-Prot
False positive sequences
3 sequences

IF2_CYTH3   (Q11PK5), SYI_LACLA   (Q9CEH8), TREH_MYCTU  (P71741)

		
PDB
[Detailed view]
455 PDB

pdb_00001ny4; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j7p; pdb_00003j7r; pdb_00003j80; pdb_00003j81; pdb_00003jag; pdb_00003jah; pdb_00003jai; pdb_00003jam; pdb_00003jap; pdb_00004d5l; pdb_00004d61; pdb_00004kzx; pdb_00004kzy; pdb_00004kzz; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; pdb_00004ug0; pdb_00004v4n; pdb_00004v6i; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; pdb_00004v7r; pdb_00004v88; pdb_00004v8y; pdb_00004v8z; pdb_00004v92; pdb_00005a2q; pdb_00005aj0; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005flx; pdb_00005i4l; pdb_00005it7; pdb_00005it9; pdb_00005jb3; pdb_00005jbh; pdb_00005jpq; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005k0y; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; pdb_00005ndw; pdb_00005oa3; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005tzs; pdb_00005vyc; pdb_00005wlc; pdb_00005wyj; pdb_00005wyk; pdb_00006d90; pdb_00006d9j; pdb_00006eml; pdb_00006fai; pdb_00006fec; pdb_00006fyx; pdb_00006fyy; pdb_00006g18; pdb_00006g4s; pdb_00006g4w; pdb_00006g51; pdb_00006g53; pdb_00006g5h; pdb_00006g5i; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006gsm; pdb_00006gsn; pdb_00006gz3; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; pdb_00006hcq; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006ke6; pdb_00006lqp; pdb_00006lqq; pdb_00006lqr; pdb_00006lqs; pdb_00006lqt; pdb_00006lqu; pdb_00006lqv; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; pdb_00006om7; pdb_00006p4g; pdb_00006p4h; pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; pdb_00006r7q; pdb_00006rbd; pdb_00006rbe; pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006sw9; pdb_00006swc; pdb_00006swe; pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006uz7; pdb_00006w2s; pdb_00006w2t; pdb_00006wdr; pdb_00006woo; pdb_00006xa1; pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y7c; pdb_00006yal; pdb_00006yam; pdb_00006yan; pdb_00006ybs; pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zce; pdb_00006zlw; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zmt; pdb_00006zmw; pdb_00006zn5; pdb_00006zoj; pdb_00006zol; pdb_00006zon; pdb_00006zp4; pdb_00006zqa; pdb_00006zqb; pdb_00006zqc; pdb_00006zqd; pdb_00006zqe; pdb_00006zqf; pdb_00006zqg; pdb_00006zu9; pdb_00006zuo; pdb_00006zv6; pdb_00006zvh; pdb_00006zvi; pdb_00006zvj; pdb_00006zvk; pdb_00006zxd; pdb_00006zxe; pdb_00006zxf; pdb_00006zxg; pdb_00006zxh; pdb_00007a01; pdb_00007a09; pdb_00007a1g; pdb_00007ajt; pdb_00007aju; pdb_00007b7d; pdb_00007cpu; pdb_00007cpv; pdb_00007d4i; pdb_00007d5s; pdb_00007d5t; pdb_00007d63; pdb_00007jqb; pdb_00007jqc; pdb_00007k5i; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007mq8; pdb_00007mq9; pdb_00007mqa; pdb_00007n8b; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; pdb_00007nwh; pdb_00007nwi; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007oya; pdb_00007oyb; pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qp6; pdb_00007qp7; pdb_00007r4x; pdb_00007r81; pdb_00007suk; pdb_00007syg; pdb_00007syh; pdb_00007syi; pdb_00007syj; pdb_00007syk; pdb_00007syl; pdb_00007sym; pdb_00007syn; pdb_00007syo; pdb_00007syp; pdb_00007syq; pdb_00007syr; pdb_00007sys; pdb_00007syt; pdb_00007syu; pdb_00007syv; pdb_00007syw; pdb_00007syx; pdb_00007toq; pdb_00007tor; pdb_00007ucj; pdb_00007uck; pdb_00007wtt; pdb_00007wtu; pdb_00007wtv; pdb_00007wtw; pdb_00007wtx; pdb_00007wtz; pdb_00007wu0; pdb_00007xnx; pdb_00007xny; pdb_00007zag; pdb_00007zah; pdb_00007zai; pdb_00007zhg; pdb_00007zpq; pdb_00007zrs; pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008bhf; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c00; pdb_00008c01; pdb_00008c3a; pdb_00008cah; pdb_00008cas; pdb_00008cbj; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hkx; pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; pdb_00008hl4; pdb_00008hl5; pdb_00008i7j; pdb_00008ifd; pdb_00008ife; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; pdb_00008ogj; pdb_00008oh6; pdb_00008oi5; pdb_00008oj3; pdb_00008oz0; pdb_00008p03; pdb_00008p09; pdb_00008p2k; pdb_00008p4v; pdb_00008p9a; pdb_00008pj1; pdb_00008pj2; pdb_00008pj3; pdb_00008pj4; pdb_00008pj5; pdb_00008pj6; pdb_00008ppk; pdb_00008ppl; pdb_00008qoi; pdb_00008rg0; pdb_00008rw1; pdb_00008s8d; pdb_00008s8e; pdb_00008s8f; pdb_00008s8g; pdb_00008s8h; pdb_00008s8i; pdb_00008s8j; pdb_00008s8k; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008t4s; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008vft; pdb_00008wkp; pdb_00008wq2; pdb_00008wq4; pdb_00008xp2; pdb_00008xp3; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008xxl; pdb_00008xxm; pdb_00008xxn; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00008zdb; pdb_00008zdc; pdb_00008zdd; pdb_00009axt; pdb_00009axv; pdb_00009bdl; pdb_00009bdn; pdb_00009bdp; pdb_00009bh5; pdb_00009bkd; pdb_00009bln; pdb_00009c3h; pdb_00009c8k; pdb_00009cai; pdb_00009e7f; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; pdb_00009f9s; pdb_00009fhl; pdb_00009fra; pdb_00009frk; pdb_00009frl; pdb_00009fs6; pdb_00009fs8; pdb_00009fsf; pdb_00009fy0; pdb_00009g8m; pdb_00009g8o
» more