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PROSITE entry PS00961


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PURL: https://purl.expasy.org/prosite/signature/PS00961

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General information about the entry

Entry name [info] RIBOSOMAL_S28E
Accession [info] PS00961
Entry type [info] PATTERN
Date [info] 01-JUN-1994 CREATED;
01-DEC-2004 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC00743

Name and characterization of the entry

Description [info] Ribosomal protein S28e signature.
Pattern [info] 
E-[ST]-[EA]-R-E-A-[RK]-x-[LI].

Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_03 which contains 573'661 sequence entries.


Total number of hits 57 in 57 different sequences
Number of true positive hits 54 in 54 different sequences
Number of 'unknown' hits 0
Number of false positive hits 3 in 3 different sequences
Number of false negative sequences 11
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 94.74 %
Recall (true positives / (true positives + false negatives)) 83.08 %

Comments [info]

Taxonomic range [info] Archaea, Eukaryotes
Maximum number of repetitions [info] 1
Version [info] 1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences		 54 sequences 

RS281_ARATH (Q9SR73), RS282_ARATH (P34789), RS28A_NEUCR (Q7S6W5), 

RS28A_SCHPO (P0CT79), RS28A_YEAST (Q3E7X9), RS28B_CANAL (A0A1D8PQN0), 
RS28B_SCHPO (P0CT80), RS28B_YEAST (P0C0X0), RS28_AERPE  (Q9Y9A6), 
RS28_ARCFU  (O29493), RS28_BOMMO  (Q6PS50), RS28_BOVIN  (Q56JX6), 
RS28_CAEEL  (Q95Y04), RS28_CANGA  (Q6FLC3), RS28_DANRE  (Q6PBK3), 
RS28_DICDI  (Q54MZ5), RS28_DROME  (Q9W334), RS28_EREGS  (Q74ZD8), 
RS28_HUMAN  (P62857), RS28_HYPBU  (A2BK95), RS28_ICTPU  (Q90YP3), 
RS28_KLULA  (P33285), RS28_KLUMA  (P33286), RS28_MAIZE  (P46302), 
RS28_META3  (A6UT50), RS28_METJA  (P54065), RS28_METKA  (Q8TVE7), 
RS28_METM5  (A4FYI6), RS28_METM6  (A9A7E6), RS28_METM7  (A6VJU6), 
RS28_METMP  (Q6LZI8), RS28_METS5  (A4YCQ2), RS28_METVS  (A6USH4), 
RS28_MOUSE  (P62858), RS28_PAPDA  (Q6EV21), RS28_PICTO  (Q6KZI6), 
RS28_PIG(Q6QAT1), RS28_PYRAB  (P61029), RS28_PYRAE  (Q8ZTA7), 
RS28_PYRAR  (A4WLP1), RS28_PYRFU  (Q8U159), RS28_PYRHO  (P61030), 
RS28_PYRIL  (A1RS33), RS28_PYRNV  (B1Y9V2), RS28_RABIT  (G1TIB4), 
RS28_RAT(P62859), RS28_SACS2  (Q980Q5), RS28_SPOFR  (Q962Q2), 
RS28_SULAC  (Q4JAV1), RS28_SULTO  (Q975Z8), RS28_THEAC  (P57711), 
RS28_THEKO  (Q5JGR4), RS28_THEPD  (A1RXH2), RS28_THEVO  (Q97BK7)
» more

UniProtKB/Swiss-Prot
False negative sequences		 11 sequences 

RS28_HALLT  (B9LPY3), RS28_HALS3  (B0R500), RS28_HALSA  (P57710), 

RS28_HALWD  (Q18GA9), RS28_KORCO  (B1L5N5), RS28_METAC  (Q8TQL8), 
RS28_METMA  (Q8PU75), RS28_METTH  (O26356), RS28_NANEQ  (P61031), 
RS28_NATPD  (Q3IPM8), RS28_OSTOS  (O61590)
» more

UniProtKB/Swiss-Prot
False positive sequences		 3 sequences 

IF2_CYTH3   (Q11PK5), SYI_LACLA   (Q9CEH8), TREH_MYCTU  (P71741)


				
	

	

		PDB
[Detailed view]		
		
			455 PDB
			


			pdb_00001ny4; pdb_00003j6x; pdb_00003j6y; pdb_00003j77; pdb_00003j78; pdb_00003j7p; pdb_00003j7r; pdb_00003j80; pdb_00003j81; pdb_00003jag; pdb_00003jah; pdb_00003jai; 
			
				pdb_00003jam; pdb_00003jap; pdb_00004d5l; pdb_00004d61; pdb_00004kzx; pdb_00004kzy; pdb_00004kzz; pdb_00004u3m; pdb_00004u3n; pdb_00004u3u; pdb_00004u4n; pdb_00004u4o; 
				pdb_00004u4q; pdb_00004u4r; pdb_00004u4u; pdb_00004u4y; pdb_00004u4z; pdb_00004u50; pdb_00004u51; pdb_00004u52; pdb_00004u53; pdb_00004u55; pdb_00004u56; pdb_00004u6f; 
				pdb_00004ug0; pdb_00004v4n; pdb_00004v6i; pdb_00004v6u; pdb_00004v6w; pdb_00004v6x; pdb_00004v7r; pdb_00004v88; pdb_00004v8y; pdb_00004v8z; pdb_00004v92; pdb_00005a2q; 
				pdb_00005aj0; pdb_00005dat; pdb_00005dc3; pdb_00005dge; pdb_00005dgf; pdb_00005dgv; pdb_00005fci; pdb_00005fcj; pdb_00005flx; pdb_00005i4l; pdb_00005it7; pdb_00005it9; 
				pdb_00005jb3; pdb_00005jbh; pdb_00005jpq; pdb_00005juo; pdb_00005jup; pdb_00005jus; pdb_00005jut; pdb_00005juu; pdb_00005k0y; pdb_00005lks; pdb_00005lyb; pdb_00005lzs; 
				pdb_00005lzt; pdb_00005lzu; pdb_00005lzv; pdb_00005lzw; pdb_00005lzx; pdb_00005lzy; pdb_00005lzz; pdb_00005m1j; pdb_00005mc6; pdb_00005mei; pdb_00005ndg; pdb_00005ndv; 
				pdb_00005ndw; pdb_00005oa3; pdb_00005obm; pdb_00005on6; pdb_00005t2c; pdb_00005tbw; pdb_00005tga; pdb_00005tgm; pdb_00005tzs; pdb_00005vyc; pdb_00005wlc; pdb_00005wyj; 
				pdb_00005wyk; pdb_00006d90; pdb_00006d9j; pdb_00006eml; pdb_00006fai; pdb_00006fec; pdb_00006fyx; pdb_00006fyy; pdb_00006g18; pdb_00006g4s; pdb_00006g4w; pdb_00006g51; 
				pdb_00006g53; pdb_00006g5h; pdb_00006g5i; pdb_00006gq1; pdb_00006gqb; pdb_00006gqv; pdb_00006gsm; pdb_00006gsn; pdb_00006gz3; pdb_00006hcf; pdb_00006hcj; pdb_00006hcm; 
				pdb_00006hcq; pdb_00006hhq; pdb_00006i7o; pdb_00006ip5; pdb_00006ip6; pdb_00006ip8; pdb_00006ke6; pdb_00006lqp; pdb_00006lqq; pdb_00006lqr; pdb_00006lqs; pdb_00006lqt; 
				pdb_00006lqu; pdb_00006lqv; pdb_00006mtb; pdb_00006mtc; pdb_00006mtd; pdb_00006mte; pdb_00006ole; pdb_00006olf; pdb_00006olg; pdb_00006oli; pdb_00006olz; pdb_00006om0; 
				pdb_00006om7; pdb_00006p4g; pdb_00006p4h; pdb_00006p5i; pdb_00006p5j; pdb_00006p5k; pdb_00006p5n; pdb_00006q8y; pdb_00006qzp; pdb_00006r5q; pdb_00006r6g; pdb_00006r6p; 
				pdb_00006r7q; pdb_00006rbd; pdb_00006rbe; pdb_00006s47; pdb_00006sgc; pdb_00006skf; pdb_00006skg; pdb_00006snt; pdb_00006sv4; pdb_00006sw9; pdb_00006swc; pdb_00006swe; 
				pdb_00006t4q; pdb_00006t7i; pdb_00006t7t; pdb_00006t83; pdb_00006tb3; pdb_00006th6; pdb_00006tnu; pdb_00006uz7; pdb_00006w2s; pdb_00006w2t; pdb_00006wdr; pdb_00006woo; 
				pdb_00006xa1; pdb_00006xu6; pdb_00006xu7; pdb_00006xu8; pdb_00006y0g; pdb_00006y2l; pdb_00006y57; pdb_00006y7c; pdb_00006yal; pdb_00006yam; pdb_00006yan; pdb_00006ybs; 
				pdb_00006z6j; pdb_00006z6k; pdb_00006z6l; pdb_00006z6m; pdb_00006z6n; pdb_00006zce; pdb_00006zlw; pdb_00006zm7; pdb_00006zme; pdb_00006zmi; pdb_00006zmo; pdb_00006zmt; 
				pdb_00006zmw; pdb_00006zn5; pdb_00006zoj; pdb_00006zol; pdb_00006zon; pdb_00006zp4; pdb_00006zqa; pdb_00006zqb; pdb_00006zqc; pdb_00006zqd; pdb_00006zqe; pdb_00006zqf; 
				pdb_00006zqg; pdb_00006zu9; pdb_00006zuo; pdb_00006zv6; pdb_00006zvh; pdb_00006zvi; pdb_00006zvj; pdb_00006zvk; pdb_00006zxd; pdb_00006zxe; pdb_00006zxf; pdb_00006zxg; 
				pdb_00006zxh; pdb_00007a01; pdb_00007a09; pdb_00007a1g; pdb_00007ajt; pdb_00007aju; pdb_00007b7d; pdb_00007cpu; pdb_00007cpv; pdb_00007d4i; pdb_00007d5s; pdb_00007d5t; 
				pdb_00007d63; pdb_00007jqb; pdb_00007jqc; pdb_00007k5i; pdb_00007ls1; pdb_00007ls2; pdb_00007mdz; pdb_00007mpi; pdb_00007mpj; pdb_00007mq8; pdb_00007mq9; pdb_00007mqa; 
				pdb_00007n8b; pdb_00007nrc; pdb_00007nrd; pdb_00007nwg; pdb_00007nwh; pdb_00007nwi; pdb_00007o7y; pdb_00007o7z; pdb_00007o80; pdb_00007o81; pdb_00007oya; pdb_00007oyb; 
				pdb_00007oyd; pdb_00007pzy; pdb_00007q08; pdb_00007q0f; pdb_00007q0p; pdb_00007q0r; pdb_00007qp6; pdb_00007qp7; pdb_00007r4x; pdb_00007r81; pdb_00007suk; pdb_00007syg; 
				pdb_00007syh; pdb_00007syi; pdb_00007syj; pdb_00007syk; pdb_00007syl; pdb_00007sym; pdb_00007syn; pdb_00007syo; pdb_00007syp; pdb_00007syq; pdb_00007syr; pdb_00007sys; 
				pdb_00007syt; pdb_00007syu; pdb_00007syv; pdb_00007syw; pdb_00007syx; pdb_00007toq; pdb_00007tor; pdb_00007ucj; pdb_00007uck; pdb_00007wtt; pdb_00007wtu; pdb_00007wtv; 
				pdb_00007wtw; pdb_00007wtx; pdb_00007wtz; pdb_00007wu0; pdb_00007xnx; pdb_00007xny; pdb_00007zag; pdb_00007zah; pdb_00007zai; pdb_00007zhg; pdb_00007zpq; pdb_00007zrs; 
				pdb_00007zuw; pdb_00007zux; pdb_00007zw0; pdb_00008bhf; pdb_00008bn3; pdb_00008bqd; pdb_00008bqx; pdb_00008btk; pdb_00008c00; pdb_00008c01; pdb_00008c3a; pdb_00008cah; 
				pdb_00008cas; pdb_00008cbj; pdb_00008ccs; pdb_00008cdl; pdb_00008cdr; pdb_00008ceh; pdb_00008cf5; pdb_00008cg8; pdb_00008cgn; pdb_00008civ; pdb_00008cku; pdb_00008cmj; 
				pdb_00008g5y; pdb_00008g5z; pdb_00008g60; pdb_00008g61; pdb_00008g6j; pdb_00008glp; pdb_00008hkx; pdb_00008hky; pdb_00008hkz; pdb_00008hl1; pdb_00008hl2; pdb_00008hl3; 
				pdb_00008hl4; pdb_00008hl5; pdb_00008i7j; pdb_00008ifd; pdb_00008ife; pdb_00008jdj; pdb_00008jdk; pdb_00008jdl; pdb_00008jdm; pdb_00008k2c; pdb_00008k2d; pdb_00008k82; 
				pdb_00008ogj; pdb_00008oh6; pdb_00008oi5; pdb_00008oj3; pdb_00008oz0; pdb_00008p03; pdb_00008p09; pdb_00008p2k; pdb_00008p4v; pdb_00008p9a; pdb_00008pj1; pdb_00008pj2; 
				pdb_00008pj3; pdb_00008pj4; pdb_00008pj5; pdb_00008pj6; pdb_00008ppk; pdb_00008ppl; pdb_00008qoi; pdb_00008rg0; pdb_00008rw1; pdb_00008s8d; pdb_00008s8e; pdb_00008s8f; 
				pdb_00008s8g; pdb_00008s8h; pdb_00008s8i; pdb_00008s8j; pdb_00008s8k; pdb_00008scb; pdb_00008t2x; pdb_00008t2y; pdb_00008t2z; pdb_00008t30; pdb_00008t3a; pdb_00008t3b; 
				pdb_00008t3c; pdb_00008t3d; pdb_00008t3e; pdb_00008t3f; pdb_00008t4s; pdb_00008ukb; pdb_00008ut0; pdb_00008uti; pdb_00008vft; pdb_00008wkp; pdb_00008wq2; pdb_00008wq4; 
				pdb_00008xp2; pdb_00008xp3; pdb_00008xsx; pdb_00008xsy; pdb_00008xsz; pdb_00008xu8; pdb_00008xxl; pdb_00008xxm; pdb_00008xxn; pdb_00008y0u; pdb_00008y0w; pdb_00008y0x; 
				pdb_00008yld; pdb_00008ylr; pdb_00008yoo; pdb_00008yop; pdb_00008z70; pdb_00008z71; pdb_00008zdb; pdb_00008zdc; pdb_00008zdd; pdb_00009axt; pdb_00009axv; pdb_00009bdl; 
				pdb_00009bdn; pdb_00009bdp; pdb_00009bh5; pdb_00009bkd; pdb_00009bln; pdb_00009c3h; pdb_00009c8k; pdb_00009cai; pdb_00009e7f; pdb_00009f1b; pdb_00009f1c; pdb_00009f1d; 
				pdb_00009f9s; pdb_00009fhl; pdb_00009fra; pdb_00009frk; pdb_00009frl; pdb_00009fs6; pdb_00009fs8; pdb_00009fsf; pdb_00009fy0; pdb_00009g8m; pdb_00009g8o
			
			

			» more