PROSITE entry PS00968
View entry in original PROSITE format
View entry in raw text format (no links)
Direct ScanProsite submission
General information about the entry
Entry name [info] | ANTENNA_COMP_ALPHA |
Accession [info] | PS00968 |
Entry type [info] | PATTERN |
Date [info] |
01-JUN-1994 CREATED;
01-JUL-1998 DATA UPDATE; 08-NOV-2023 INFO UPDATE. |
PROSITE Doc. [info] | PDOC00748 |
Name and characterization of the entry
Description [info] | Antenna complexes alpha subunits signature. |
Pattern [info] |
[LIVFAG]-x-[GASV]-[LIVFA]-x-[IV]-H-x(3)-[LIVM]-[GSTAE]-[STANH]-x(1,3)- [STN]-W-[LIVMFYW]. |
Numerical results [info]
Total number of hits | 32 in 32 different sequences |
Number of true positive hits | 32 in 32 different sequences |
Number of 'unknown' hits | 0 |
Number of false positive hits | 0 |
Number of false negative sequences | 2 |
Number of 'partial' sequences | 0 |
Precision (true positives / (true positives + false positives)) | 100.00 % |
Recall (true positives / (true positives + false negatives)) | 94.12 % |
Comments [info]
Taxonomic range [info] | Prokaryotes (Bacteria) |
Maximum number of repetitions [info] | 1 |
Version [info] | 1 |
Cross-references [info]
UniProtKB/Swiss-Prot True positive sequences |
32 sequences
LHA1_CERS4 (Q3J1A4), LHA1_CERSP (P0C0X9), LHA1_HALHL (P80100), LHA1_HALHR (P80102), LHA1_RHOAC (P35089), LHA1_RHOCA (P02948), LHA1_RHOPA (P35101), LHA1_RHOTE (P80588), LHA1_RUBGE (P0DJO0), LHA1_RUBGI (I0HUL6), LHA2_CERS4 (Q3J144), LHA2_CERSP (P0C0Y0), LHA2_HALHL (P80101), LHA2_HALHR (P80103), LHA2_RHOAC (P35090), LHA2_RHOCA (P07367), LHA2_RHOPA (P35102), LHA2_RHOTE (P80589), LHA3_HALHL (P80107), LHA3_RHOAC (P35091), LHA3_RHOPL (P35103), LHA4_RHOAC (P26789), LHA4_RHOPA (P35104), LHA5_RHOPA (P35105), LHA6_RHOAC (P35092), LHA7_RHOAC (P35093), LHA_AFIMA (P80259), LHA_BLAVI (P04123), LHA_CHLAA (P07503), LHA_MAGML (P97253), LHA_RHORU (P02947), LHA_ROSDO (P26273)» more
|
UniProtKB/Swiss-Prot False negative sequences |
2 sequences
LHA2_RHOSU (P95655), LHA_RHOTE (P80586) |
PDB [Detailed view] |
28 PDB
1IJD; 1KZU; 1LGH; 1NKZ; 1XRD; 2FKW; 4V9G; 6ET5; 7EQD; 7F0L; 7PBW; 7PIL; 7TUW; 7TV3; 7VA9; 7VB9; 7VNM; 7VNY; 7VOR; 7VOT; 7VOY; 7YML; 7ZDI; 7ZE3; 7ZE8; 8B64; 8FB9; 8FBB » more |