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| Entry: PS00983 |
General information about the entry
| Entry name [info] | LY6_UPAR |
| Accession [info] | PS00983 |
| Entry type [info] | PATTERN |
| Date [info] |
01-JUN-1994 CREATED;
01-JUN-1994 DATA UPDATE; 22-FEB-2023 INFO UPDATE. |
| PROSITE Doc. [info] | PDOC00756 |
Name and characterization of the entry
| Description [info] | Ly-6 / u-PAR domain signature. |
| Pattern [info] |
[EQR]-C-[LIVMFYAH]-x-C-x(5,8)-C-x(3,8)-[EDNQSTV]-C-{C}-x(5)-C-
x(12,24)-C.
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Numerical results [info]
| Total number of hits | 51 in 35 different sequences |
| Number of true positive hits | 51 in 35 different sequences |
| Number of 'unknown' hits | 0 |
| Number of false positive hits | 0 |
| Number of false negative sequences | 52 |
| Number of 'partial' sequences | 1 |
| Precision (true positives / (true positives + false positives)) | 100.00 % |
| Recall (true positives / (true positives + false negatives)) | 49.51 % |
Comments [info]
| Taxonomic range [info] | Eukaryotes, Eukaryotic viruses |
| Maximum number of repetitions [info] | 3 |
| Site [info] | disulfide at position 2 |
| Site [info] | disulfide at position 5 |
| Site [info] | disulfide at position 7 |
| Site [info] | disulfide at position 10 |
| Site [info] | disulfide at position 13 |
| Site [info] | disulfide at position 15 |
| Version [info] | 1 |
Cross-references [info]
| UniProtKB/Swiss-Prot True positive sequences |
35 sequences
CD59_AOTTR (P51447 ), CD59_CALSQ (P46657 ), CD59_CHLAE (Q28216 ), CD59_HUMAN (P13987 ), CD59_MACFA (Q8SQ46 ), CD59_PAPSP (Q28785 ), CD59_PIG (O62680 ), CD59_PONAB (Q5R510 ), CD59_RAT (P27274 ), CD59_SHV21 (Q00996 ), GML_HUMAN (Q99445 ), HDBP1_MOUSE (Q9D1N2 ), LY6A_MOUSE (P05533 ), LY6C1_MOUSE (P0CW02 ), LY6C2_MOUSE (P0CW03 ), LY6D_BOVIN (Q148C3 ), LY6D_HUMAN (Q14210 ), LY6D_MOUSE (P35459 ), LY6F_MOUSE (P35460 ), LY6G_MOUSE (P35461 ), LY6I_MOUSE (Q9WU67 ), LY6S_HUMAN (P0DTL4 ), LYPD2_HUMAN (Q6UXB3 ), LYPD5_HUMAN (Q6UWN5 ), LYPD5_MOUSE (Q9D7Z7 ), PSCA_MOUSE (P57096 ), SLUR1_MOUSE (Q9Z0K7 ), UPAR_AOTTR (Q9GK77 ), UPAR_BOVIN (Q05588 ), UPAR_CHLAE (Q9GK79 ), UPAR_HUMAN (Q03405 ), UPAR_MACFA (Q9GK78 ), UPAR_MOUSE (P35456 ), UPAR_PANTR (Q9GK80 ), UPAR_RAT (P49616 )» more
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| UniProtKB/Swiss-Prot False negative sequences |
52 sequences
BNCR_DANRE (P0DPQ9 ), BNCR_ORYLA (H2LID1 ), CD177_HUMAN (Q8N6Q3 ), CD59A_MOUSE (O55186 ), CD59B_MOUSE (P58019 ), CD59_RABIT (O77541 ), CD59_SAISC (P47777 ), LPD6B_HUMAN (Q8NI32 ), LPD6B_MOUSE (Q9D7F2 ), LY65B_HUMAN (Q8NDX9 ), LY65B_MOUSE (Q8K1T4 ), LY65B_RAT (Q6MG53 ), LY65C_CANLF (Q9XSV5 ), LY65C_HUMAN (Q5SRR4 ), LY65C_MACMU (Q863H0 ), LY65C_MOUSE (Q8K1T5 ), LY65C_RAT (Q8CHN2 ), LY66C_BOVIN (A0JNL5 ), LY66C_HUMAN (O95867 ), LY66C_MOUSE (Q9Z1Q4 ), LY66D_HUMAN (O95868 ), LY66D_MOUSE (Q9Z1Q3 ), LY66D_RAT (Q6MG58 ), LY66E_MOUSE (Q8K1T6 ), LY6E_CHICK (Q90986 ), LY6E_HUMAN (Q16553 ), LY6E_MOUSE (Q64253 ), LY6H_HUMAN (O94772 ), LY6H_MOUSE (Q9WUC3 ), LYPD1_HUMAN (Q8N2G4 ), LYPD1_MOUSE (Q8BLC3 ), LYPD1_RAT (Q66H42 ), LYPD2_MOUSE (Q9DD23 ), LYPD3_HUMAN (O95274 ), LYPD3_MOUSE (Q91YK8 ), LYPD3_RAT (O55162 ), LYPD4_BOVIN (Q32LD3 ), LYPD4_HUMAN (Q6UWN0 ), LYPD4_MOUSE (Q8BVP6 ), PAT13_MOUSE (D3YWX3 ), PAT14_MOUSE (Q3UN54 ), PIP1_PIG (P83106 ), PSCA_HUMAN (O43653 ), SACA4_BOVIN (Q32PB3 ), SACA4_HUMAN (Q8TDM5 ), SACA4_MOUSE (Q80ZQ0 ), SLUR1_HUMAN (P55000 ), SOLD1_BOVIN (P83107 ), TX101_CRIGR (Q7TQN2 ), TX101_HUMAN (Q9BY14 ), TX101_MOUSE (Q9JMI7 ), TX101_RAT (Q924B5 )» more |
| UniProtKB/Swiss-Prot 'Partial' sequences |
1 sequence
CD59_SHEEP (P58020 ) |
| PDB [Detailed view] |
26 PDB
1CDQ; 1CDR; 1CDS; 1ERG; 1ERH; 1YWH; 2FD6; 2I9B; 2J8B; 2OFS; 2UWR; 2UX2; 3BT1; 3BT2; 3LAQ; 3U73; 3U74; 4BIK; 4K24; 4QTI; 5IMT; 5IMY; 6AEX; 6ZD0; 7E17; 7V63 » more |
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